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Job request: 19313

Organisation:
The London School of Hygiene & Tropical Medicine
Workspace:
long_term_kidney_outcomes_after_covid
ID:
wf3l2q4z33mr6ymr
View repo View project.yaml

This page shows the technical details of what happened when the authorised researcher Viyaasan Mahalingasivam requested one or more actions to be run against real patient data within a secure environment.

By cross-referencing the list of jobs with the pipeline section below, you can infer what security level the outputs were written to.

The output security levels are:

  • highly_sensitive
    • Researchers can never directly view these outputs
    • Researchers can only request code is run against them
  • moderately_sensitive
    • Can be viewed by an approved researcher by logging into a highly secure environment
    • These are the only outputs that can be requested for public release via a controlled output review service.

Jobs

  • Action:
    descriptive_covid_severity
    Status:
    Succeeded
    Job identifier:
    mf6bizsixuhmtjt7
  • Action:
    descriptive_covid_aki
    Status:
    Succeeded
    Job identifier:
    dqra4przucwa46u6
  • Action:
    cox_models_hospitalised_death
    Status:
    Failed
    Job identifier:
    a7fcq4pcpgszos62
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    cox_models_hospitalised_egfr_half
    Status:
    Failed
    Job identifier:
    6vncsg7badg3kvz6
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    cox_models_hospitalised_esrd
    Status:
    Failed
    Job identifier:
    jhontceggdypvy6h
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    cox_models2_hospitalised_death
    Status:
    Failed
    Job identifier:
    t6p7rbmbsqlodlyt
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    cox_models2_hospitalised_aki
    Status:
    Failed
    Job identifier:
    mj3whgrs4dfv3ncf
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    cox_models_hospitalised_aki
    Status:
    Failed
    Job identifier:
    mkxkbm2jn62vro6i
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    cox_models2_hospitalised_esrd
    Status:
    Failed
    Job identifier:
    b45udt3evh3nwyg4
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    cox_models2_hospitalised_egfr_half
    Status:
    Failed
    Job identifier:
    v23xtgg2cbfsqahd
    Error:
    cancelled_by_user: Cancelled by user

Pipeline

Show project.yaml
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Timeline

  • Created:

  • Started:

  • Runtime: 03:32:42

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job request

Status
Failed
Backend
TPP
Workspace
long_term_kidney_outcomes_after_covid
Requested by
Viyaasan Mahalingasivam
Branch
main
Force run dependencies
No
Git commit hash
b7141eb
Requested actions
  • descriptive_covid_severity
  • descriptive_covid_aki
  • cox_models_hospitalised_esrd
  • cox_models_hospitalised_egfr_half
  • cox_models_hospitalised_aki
  • cox_models_hospitalised_death
  • cox_models2_hospitalised_esrd
  • cox_models2_hospitalised_egfr_half
  • cox_models2_hospitalised_aki
  • cox_models2_hospitalised_death

Code comparison

Compare the code used in this job request