Skip to content

Job request: 20190

Organisation:
The London School of Hygiene & Tropical Medicine
Workspace:
long_term_kidney_outcomes_after_covid
ID:
ms3nyyvshy3upiho

This page shows the technical details of what happened when the authorised researcher Viyaasan Mahalingasivam requested one or more actions to be run against real patient data within a secure environment.

By cross-referencing the list of jobs with the pipeline section below, you can infer what security level the outputs were written to.

The output security levels are:

  • highly_sensitive
    • Researchers can never directly view these outputs
    • Researchers can only request code is run against them
  • moderately_sensitive
    • Can be viewed by an approved researcher by logging into a highly secure environment
    • These are the only outputs that can be requested for public release via a controlled output review service.

Jobs

  • Action:
    cox_models2_hospitalised_aki
    Status:
    Succeeded
    Job identifier:
    bhmnimh47mfbtmgu
  • Action:
    cox_models2_hospitalised_death
    Status:
    Succeeded
    Job identifier:
    eslz6tytj7me23rs
  • Action:
    cox_models2_hospitalised_egfr_half
    Status:
    Succeeded
    Job identifier:
    th36l4z3x6yvcsd4
  • Action:
    cox_models2_hospitalised_esrd
    Status:
    Succeeded
    Job identifier:
    gzmyx7fcaiba74au
  • Action:
    cox_models_hospitalised_aki
    Status:
    Succeeded
    Job identifier:
    5nlxvc44q62ndbbm
  • Action:
    cox_models_hospitalised_death
    Status:
    Succeeded
    Job identifier:
    iftjc3e77lp23mgn
  • Action:
    cox_models_hospitalised_egfr_half
    Status:
    Succeeded
    Job identifier:
    n3set3pok5ps5h3t
  • Action:
    cox_models_hospitalised_esrd
    Status:
    Succeeded
    Job identifier:
    pr5phjyf2uadnkl3
  • Action:
    cox_models_hospitalised_esrd_stratified
    Status:
    Succeeded
    Job identifier:
    waa6uslhzigjbkgf
  • Action:
    cox_models_hospitalised_egfr_half_stratified
    Status:
    Succeeded
    Job identifier:
    v7vqco52pssn6hgt
  • Action:
    cox_models_hospitalised_aki_stratified
    Status:
    Succeeded
    Job identifier:
    4q7pasngfblwtadh
  • Action:
    cox_2020_full_forest
    Status:
    Succeeded
    Job identifier:
    o4ucya6yv2cwba6p
  • Action:
    analysis_complete
    Status:
    Succeeded
    Job identifier:
    jxbkouqkjsysprlc
  • Action:
    cox_2017_full_forest
    Status:
    Succeeded
    Job identifier:
    axff3f45cybth36g
  • Action:
    cox_models2_2017_aki
    Status:
    Succeeded
    Job identifier:
    z7n4uubp5555p3mu
  • Action:
    cox_models2_2017_death
    Status:
    Succeeded
    Job identifier:
    etrzg5niai6m3s7t
  • Action:
    cox_models2_2017_egfr_half
    Status:
    Succeeded
    Job identifier:
    4ucod2yfs5inmhx5
  • Action:
    cox_models2_2017_esrd
    Status:
    Succeeded
    Job identifier:
    exoimdchckjqyk5s
  • Action:
    cox_models2_2020_aki
    Status:
    Succeeded
    Job identifier:
    zpxfbaoqrkv726c4
  • Action:
    cox_models2_2020_death
    Status:
    Succeeded
    Job identifier:
    h7xv6ud4d57jakng
  • Action:
    cox_models2_2020_egfr_half
    Status:
    Succeeded
    Job identifier:
    4445ypbeutxcw4uu
  • Action:
    cox_models2_2020_esrd
    Status:
    Succeeded
    Job identifier:
    5ewzrbpwdd7j5fbq
  • Action:
    cox_models3_2017_aki
    Status:
    Succeeded
    Job identifier:
    qnmgmvpce53kzpni
  • Action:
    cox_models3_2017_death
    Status:
    Succeeded
    Job identifier:
    makohulnev44stxo
  • Action:
    cox_models3_2017_egfr_half
    Status:
    Succeeded
    Job identifier:
    zvp3uuphzbnci53e
  • Action:
    cox_models3_2017_esrd
    Status:
    Succeeded
    Job identifier:
    e7gj7d6y74erpxva
  • Action:
    cox_models3_2020_aki
    Status:
    Succeeded
    Job identifier:
    hyxzoatdbebzcvyt
  • Action:
    cox_models3_2020_death
    Status:
    Succeeded
    Job identifier:
    si7wbwcf2iltjsfj
  • Action:
    cox_models3_2020_egfr_half
    Status:
    Succeeded
    Job identifier:
    5edgzdsm2cjnqned
  • Action:
    cox_models3_2020_esrd
    Status:
    Succeeded
    Job identifier:
    3ckrcl2cbky45zlp
  • Action:
    cox_models4_2017_aki
    Status:
    Succeeded
    Job identifier:
    qgiegojmuj4gaj6n
  • Action:
    cox_models4_2017_death
    Status:
    Succeeded
    Job identifier:
    e6cz4gqxw2q6neiu
  • Action:
    cox_models4_2017_egfr_half
    Status:
    Succeeded
    Job identifier:
    k4be7o4jgfqbb3s3
  • Action:
    cox_models4_2017_esrd
    Status:
    Succeeded
    Job identifier:
    vqzjsajloga6ab4w
  • Action:
    cox_models4_2020_aki
    Status:
    Succeeded
    Job identifier:
    pwmysa7y4j5s2plh
  • Action:
    cox_models4_2020_death
    Status:
    Succeeded
    Job identifier:
    cdvmw4qy5t6fmsu5
  • Action:
    cox_models4_2020_egfr_half
    Status:
    Succeeded
    Job identifier:
    rl44yj5niqdscbid
  • Action:
    cox_models4_2020_esrd
    Status:
    Succeeded
    Job identifier:
    goyq6g5mpnv7gera
  • Action:
    cox_models_2017_aki
    Status:
    Failed
    Job identifier:
    t6wyr2sds5elyyvo
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    cox_models_2017_death
    Status:
    Failed
    Job identifier:
    omsvtvyg26an752s
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    cox_models_2017_egfr_half
    Status:
    Succeeded
    Job identifier:
    cetx7hf5g3ktwlhb
  • Action:
    cox_models_2017_esrd
    Status:
    Failed
    Job identifier:
    eccbb54757v5tgu5
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    cox_models_2020_aki
    Status:
    Succeeded
    Job identifier:
    2zadve2bcd3m7x2d
  • Action:
    cox_models_2020_death
    Status:
    Failed
    Job identifier:
    me2guvqe72i2gfxc
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    cox_models_2020_egfr_half
    Status:
    Succeeded
    Job identifier:
    kpoxgrd7cb6jwtkl
  • Action:
    cox_models_2020_esrd
    Status:
    Failed
    Job identifier:
    6l4d2b3ifi7rzitk
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    crude_rates_aki
    Status:
    Succeeded
    Job identifier:
    ga4vnbfo3odtrxb5
  • Action:
    crude_rates_death
    Status:
    Succeeded
    Job identifier:
    dvn3wuvp5ag7k5zx
  • Action:
    crude_rates_egfr_half
    Status:
    Succeeded
    Job identifier:
    s3gufy4lst3lw6ar
  • Action:
    crude_rates_esrd
    Status:
    Succeeded
    Job identifier:
    7d63biim7zch5257
  • Action:
    descriptive_case
    Status:
    Succeeded
    Job identifier:
    l6i5jibfysab4nfn
  • Action:
    descriptive_case_complete
    Status:
    Succeeded
    Job identifier:
    o4uudr3y3dktkx6h
  • Action:
    descriptive_covid_aki
    Status:
    Succeeded
    Job identifier:
    q7dnwexcxfa2ntcp
  • Action:
    descriptive_covid_krt
    Status:
    Succeeded
    Job identifier:
    hypzjtabwqgdrbya
  • Action:
    descriptive_covid_severity
    Status:
    Succeeded
    Job identifier:
    pr3agtmykxmvyykg
  • Action:
    descriptive_covid_vax
    Status:
    Succeeded
    Job identifier:
    s5tf4ca2nurrdl72
  • Action:
    descriptive_wave
    Status:
    Succeeded
    Job identifier:
    mb3tblnlap4y2ki3
  • Action:
    cox_models_case_esrd
    Status:
    Failed
    Job identifier:
    oixqauviyvdpn66c
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    cox_models_case_egfr_half
    Status:
    Failed
    Job identifier:
    3lb664xxeuc5zx6q
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    cox_models_case_aki
    Status:
    Failed
    Job identifier:
    mcqumhik4oxh7gd4
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    cox_models_case_death
    Status:
    Failed
    Job identifier:
    w4pfcre22cgj7gcd
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    cox_models_severity_esrd
    Status:
    Failed
    Job identifier:
    lh7unxf62hynufx7
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    cox_models_severity_egfr_half
    Status:
    Failed
    Job identifier:
    mvzepguanc5v34zm
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    cox_models_severity_aki
    Status:
    Failed
    Job identifier:
    fpzmymlmxexd3iub
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    cox_models_severity_death
    Status:
    Failed
    Job identifier:
    ewc3ntlby3z7ko67
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    cox_models_hospitalised_death_subgroups
    Status:
    Failed
    Job identifier:
    lgofa6mpghi7zsca
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    cox_models_aki_death
    Status:
    Failed
    Job identifier:
    yhy36tk5k632cejn
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    cox_models_aki_aki
    Status:
    Failed
    Job identifier:
    jwiwcte5nvr3rtjs
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    cox_models_hospitalised_egfr_half_subgroups
    Status:
    Failed
    Job identifier:
    tae4k5z72gygmufl
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    cox_models_hospitalised_aki_subgroups
    Status:
    Failed
    Job identifier:
    keynoiyr7dmhn67z
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    cox_models_hospitalised_death_stratified
    Status:
    Failed
    Job identifier:
    tjt2ke4nuxabgv2o
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    cox_models_aki_egfr_half
    Status:
    Failed
    Job identifier:
    7vewjdd74arqzzg3
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    cox_models_hospitalised_esrd_subgroups
    Status:
    Failed
    Job identifier:
    yfyadfba2g3kvi45
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    cox_models_aki_esrd
    Status:
    Failed
    Job identifier:
    nltmxr4o45dfvtvr
    Error:
    cancelled_by_user: Cancelled by user

Pipeline

Show project.yaml
This file is too large to render, try viewing it on GitHub .

Timeline

  • Created:

  • Started:

  • Runtime: 1665:40:21

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job request

Status
Failed
Backend
TPP
Requested by
Viyaasan Mahalingasivam
Branch
main
Force run dependencies
No
Git commit hash
f9dfddd
Requested actions
  • cox_2017_full_forest
  • cox_2020_full_forest
  • descriptive_case
  • descriptive_covid_severity
  • descriptive_covid_aki
  • descriptive_wave
  • descriptive_covid_vax
  • descriptive_covid_krt
  • crude_rates_esrd
  • crude_rates_egfr_half
  • crude_rates_aki
  • crude_rates_death
  • cox_models_2017_esrd
  • cox_models_2017_egfr_half
  • cox_models_2017_aki
  • cox_models_2017_death
  • cox_models_2020_esrd
  • cox_models_2020_egfr_half
  • cox_models_2020_aki
  • cox_models_2020_death
  • cox_models_hospitalised_esrd
  • cox_models_hospitalised_egfr_half
  • cox_models_hospitalised_aki
  • cox_models_hospitalised_death
  • cox_models2_2017_esrd
  • cox_models2_2017_egfr_half
  • cox_models2_2017_aki
  • cox_models2_2017_death
  • cox_models2_2020_esrd
  • cox_models2_2020_egfr_half
  • cox_models2_2020_aki
  • cox_models2_2020_death
  • cox_models2_hospitalised_esrd
  • cox_models2_hospitalised_egfr_half
  • cox_models2_hospitalised_aki
  • cox_models2_hospitalised_death
  • analysis_complete
  • descriptive_case_complete
  • cox_models3_2017_esrd
  • cox_models3_2017_egfr_half
  • cox_models3_2017_aki
  • cox_models3_2017_death
  • cox_models3_2020_esrd
  • cox_models3_2020_egfr_half
  • cox_models3_2020_aki
  • cox_models3_2020_death
  • cox_models4_2017_esrd
  • cox_models4_2017_egfr_half
  • cox_models4_2017_aki
  • cox_models4_2017_death
  • cox_models4_2020_esrd
  • cox_models4_2020_egfr_half
  • cox_models4_2020_aki
  • cox_models4_2020_death
  • cox_models_case_esrd
  • cox_models_case_egfr_half
  • cox_models_case_aki
  • cox_models_case_death
  • cox_models_severity_esrd
  • cox_models_severity_egfr_half
  • cox_models_severity_aki
  • cox_models_severity_death
  • cox_models_aki_esrd
  • cox_models_aki_egfr_half
  • cox_models_aki_aki
  • cox_models_aki_death
  • cox_models_hospitalised_esrd_stratified
  • cox_models_hospitalised_egfr_half_stratified
  • cox_models_hospitalised_aki_stratified
  • cox_models_hospitalised_death_stratified
  • cox_models_hospitalised_esrd_subgroups
  • cox_models_hospitalised_egfr_half_subgroups
  • cox_models_hospitalised_aki_subgroups
  • cox_models_hospitalised_death_subgroups

Code comparison

Compare the code used in this job request