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Job request: 20295

Organisation:
The London School of Hygiene & Tropical Medicine
Workspace:
long_term_kidney_outcomes_after_covid
ID:
poebn35osm3pkjmq
View repo View project.yaml

This page shows the technical details of what happened when the authorised researcher Viyaasan Mahalingasivam requested one or more actions to be run against real patient data within a secure environment.

By cross-referencing the list of jobs with the pipeline section below, you can infer what security level the outputs were written to.

The output security levels are:

  • highly_sensitive
    • Researchers can never directly view these outputs
    • Researchers can only request code is run against them
  • moderately_sensitive
    • Can be viewed by an approved researcher by logging into a highly secure environment
    • These are the only outputs that can be requested for public release via a controlled output review service.

Jobs

  • Action:
    cox_models_case_esrd
    Status:
    Succeeded
    Job identifier:
    oq3j7ismlusiq2wt
  • Action:
    cox_models_case_egfr_half
    Status:
    Succeeded
    Job identifier:
    tefcrehscnsn7mhc
  • Action:
    cox_models_case_aki
    Status:
    Succeeded
    Job identifier:
    q4vb5gzrsm2mzacm
  • Action:
    cox_models_case_death
    Status:
    Succeeded
    Job identifier:
    edptoq7hwzw7ryqd
  • Action:
    cox_models_severity_esrd
    Status:
    Failed
    Job identifier:
    awfzbj2ejimyqrme
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    cox_models_severity_egfr_half
    Status:
    Succeeded
    Job identifier:
    d7hfsxdjvwya3wgs
  • Action:
    cox_models_severity_aki
    Status:
    Failed
    Job identifier:
    ekz67s33tw32qp3s
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    cox_models_severity_death
    Status:
    Failed
    Job identifier:
    rnlfpnyerqqp4awr
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    cox_models_aki_esrd
    Status:
    Failed
    Job identifier:
    il5dqd4yw4pohea4
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    cox_models_aki_egfr_half
    Status:
    Succeeded
    Job identifier:
    2ozayjkiuz3s3lcb
  • Action:
    cox_models_aki_aki
    Status:
    Failed
    Job identifier:
    b3f4rsnocgntnnrm
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    cox_models_aki_death
    Status:
    Failed
    Job identifier:
    6dinlpawzpo64joz
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    cox_models_hospitalised_death_stratified
    Status:
    Succeeded
    Job identifier:
    znvrdxvrp75663r2
  • Action:
    cox_models_hospitalised_esrd_subgroups
    Status:
    Failed
    Job identifier:
    qzomjtotcx2tvdum
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    cox_models_hospitalised_egfr_half_subgroups
    Status:
    Failed
    Job identifier:
    3d2ld6yuywll3xhs
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    cox_models_hospitalised_aki_subgroups
    Status:
    Failed
    Job identifier:
    d4iyxwiproddvoah
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    cox_models_hospitalised_death_subgroups
    Status:
    Failed
    Job identifier:
    gtl23j5oiuuah757
    Error:
    nonzero_exit: Job exited with an error

Pipeline

Show project.yaml
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Timeline

  • Created:

  • Started:

  • Runtime: 1104:51:25

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job request

Status
Failed
Backend
TPP
Workspace
long_term_kidney_outcomes_after_covid
Requested by
Viyaasan Mahalingasivam
Branch
main
Force run dependencies
No
Git commit hash
984f17f
Requested actions
  • cox_models_case_esrd
  • cox_models_case_egfr_half
  • cox_models_case_aki
  • cox_models_case_death
  • cox_models_severity_esrd
  • cox_models_severity_egfr_half
  • cox_models_severity_aki
  • cox_models_severity_death
  • cox_models_aki_esrd
  • cox_models_aki_egfr_half
  • cox_models_aki_aki
  • cox_models_aki_death
  • cox_models_hospitalised_death_stratified
  • cox_models_hospitalised_esrd_subgroups
  • cox_models_hospitalised_egfr_half_subgroups
  • cox_models_hospitalised_aki_subgroups
  • cox_models_hospitalised_death_subgroups

Code comparison

Compare the code used in this job request