Skip to content

Job request: 20653

Organisation:
The London School of Hygiene & Tropical Medicine
Workspace:
long_term_kidney_outcomes_after_covid
ID:
gpsv3lkstwbyx7ut
View repo View project.yaml

This page shows the technical details of what happened when the authorised researcher Viyaasan Mahalingasivam requested one or more actions to be run against real patient data within a secure environment.

By cross-referencing the list of jobs with the pipeline section below, you can infer what security level the outputs were written to.

The output security levels are:

  • highly_sensitive
    • Researchers can never directly view these outputs
    • Researchers can only request code is run against them
  • moderately_sensitive
    • Can be viewed by an approved researcher by logging into a highly secure environment
    • These are the only outputs that can be requested for public release via a controlled output review service.

Jobs

  • Action:
    cox_models_covid_severity_esrd
    Status:
    Failed
    Job identifier:
    nzhqrcd4nqxjctv3
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    cox_models_covid_severity_egfr_half
    Status:
    Failed
    Job identifier:
    fvq4xgzyz2wzurxi
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    cox_models_covid_severity_aki
    Status:
    Failed
    Job identifier:
    4t6qclrs3hv7qtl2
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    cox_models_covid_severity_death
    Status:
    Failed
    Job identifier:
    qofhd66vainyyfna
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    cox_models_covid_aki_esrd
    Status:
    Failed
    Job identifier:
    vy5bdnvlznl7zri4
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    cox_models_covid_aki_egfr_half
    Status:
    Failed
    Job identifier:
    ckx6b4gvqqv4b2pq
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    cox_models_covid_aki_aki
    Status:
    Failed
    Job identifier:
    dga4bif3o5nzzd5m
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    cox_models_covid_aki_death
    Status:
    Failed
    Job identifier:
    iq6jrx3txprjbc7h
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    crude_events_covid_severity_esrd
    Status:
    Succeeded
    Job identifier:
    7xjcw6ngzcgl422b
  • Action:
    crude_events_covid_severity_egfr_half
    Status:
    Succeeded
    Job identifier:
    64xo7xygsp2sd36y
  • Action:
    crude_events_covid_severity_aki
    Status:
    Succeeded
    Job identifier:
    mrrgkwfd6kvam4ij
  • Action:
    crude_events_covid_severity_death
    Status:
    Succeeded
    Job identifier:
    jfzohy64fxjnd4n7
  • Action:
    cca_events_covid_severity_esrd
    Status:
    Succeeded
    Job identifier:
    3nrs2vu3asgcdwrs
  • Action:
    cca_events_covid_severity_egfr_half
    Status:
    Succeeded
    Job identifier:
    wkulx5vzfp3ymswp
  • Action:
    cca_events_covid_severity_aki
    Status:
    Succeeded
    Job identifier:
    orgpn7ji3cehoydl
  • Action:
    cca_events_covid_severity_death
    Status:
    Succeeded
    Job identifier:
    xnxshe636ahh4dpr
  • Action:
    crude_events_covid_aki_esrd
    Status:
    Succeeded
    Job identifier:
    yvs6gpve4i2mwnue
  • Action:
    crude_events_covid_aki_egfr_half
    Status:
    Succeeded
    Job identifier:
    uuzhve2vqlspiytq
  • Action:
    crude_events_covid_aki_aki
    Status:
    Succeeded
    Job identifier:
    t64gxwtorjf4qppi
  • Action:
    crude_events_covid_aki_death
    Status:
    Succeeded
    Job identifier:
    dgipapw654rftcfo
  • Action:
    cca_events_covid_aki_esrd
    Status:
    Succeeded
    Job identifier:
    utdjmxeg5k63oeky
  • Action:
    cca_events_covid_aki_egfr_half
    Status:
    Succeeded
    Job identifier:
    2qjyscoyakjboyv7
  • Action:
    cca_events_covid_aki_aki
    Status:
    Succeeded
    Job identifier:
    qsjdymucszgbs4qr
  • Action:
    cca_events_covid_aki_death
    Status:
    Succeeded
    Job identifier:
    pm4sraoz2agzwu2c

Pipeline

Show project.yaml
This file is too large to render, try viewing it on GitHub .

Timeline

  • Created:

  • Started:

  • Finished:

  • Runtime: 198:39:26

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job request

Status
Failed
Backend
TPP
Workspace
long_term_kidney_outcomes_after_covid
Requested by
Viyaasan Mahalingasivam
Branch
main
Force run dependencies
No
Git commit hash
ebdda10
Requested actions
  • cox_models_covid_severity_esrd
  • cox_models_covid_severity_egfr_half
  • cox_models_covid_severity_aki
  • cox_models_covid_severity_death
  • cox_models_covid_aki_esrd
  • cox_models_covid_aki_egfr_half
  • cox_models_covid_aki_aki
  • cox_models_covid_aki_death
  • crude_events_covid_severity_esrd
  • crude_events_covid_severity_egfr_half
  • crude_events_covid_severity_aki
  • crude_events_covid_severity_death
  • cca_events_covid_severity_esrd
  • cca_events_covid_severity_egfr_half
  • cca_events_covid_severity_aki
  • cca_events_covid_severity_death
  • crude_events_covid_aki_esrd
  • crude_events_covid_aki_egfr_half
  • crude_events_covid_aki_aki
  • crude_events_covid_aki_death
  • cca_events_covid_aki_esrd
  • cca_events_covid_aki_egfr_half
  • cca_events_covid_aki_aki
  • cca_events_covid_aki_death

Code comparison

Compare the code used in this job request