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Job request: 22795

Organisation:
The London School of Hygiene & Tropical Medicine
Workspace:
long_term_kidney_outcomes_after_covid
ID:
dpb7wkb5n4fj3j52

This page shows the technical details of what happened when the authorised researcher Viyaasan Mahalingasivam requested one or more actions to be run against real patient data in the project, within a secure environment.

By cross-referencing the list of jobs with the pipeline section below, you can infer what security level various outputs were written to. Researchers can never directly view outputs marked as highly_sensitive ; they can only request that code runs against them. Outputs marked as moderately_sensitive can be viewed by an approved researcher by logging into a highly secure environment. Only outputs marked as moderately_sensitive can be requested for release to the public, via a controlled output review service.

Jobs

  • Action:
    extract_2020_matching_asthma
    Status:
    Status: Succeeded
    Job identifier:
    tffv5ae75gsuj225
  • Action:
    extract_asthma_matching_2020
    Status:
    Status: Failed
    Job identifier:
    n43fka5c3ihgw3f3
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    match_2020_stp7
    Status:
    Status: Failed
    Job identifier:
    pxhgk75rrjnbxevt
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    match_2020_stp8
    Status:
    Status: Failed
    Job identifier:
    ywbbrjipfn2u27rz
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    clean_covid_matching_2020
    Status:
    Status: Failed
    Job identifier:
    fzib2kgiv7b5kzdt
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    match_2020_stp41
    Status:
    Status: Failed
    Job identifier:
    2zelump52so6viwu
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    match_2020_stp42
    Status:
    Status: Failed
    Job identifier:
    gvy6jvt6gagvfeqp
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    combine_stps_covid_2020
    Status:
    Status: Failed
    Job identifier:
    7ghhodqwhdk5nm2b
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    match_2020_stp5
    Status:
    Status: Failed
    Job identifier:
    pkdgj7dorulcanks
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    match_2020_stp6
    Status:
    Status: Failed
    Job identifier:
    ghz6dk7aqhdt5k3v
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    match_2020_stp43
    Status:
    Status: Failed
    Job identifier:
    4nskvn4knz2leu6w
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    match_2020_stp29
    Status:
    Status: Failed
    Job identifier:
    c7rvbhx32bwvzmcq
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    match_2020_stp33
    Status:
    Status: Failed
    Job identifier:
    2kdh4hoyedpg6ymq
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    match_2020_stp44
    Status:
    Status: Failed
    Job identifier:
    y2h6dmb7xpo6ru2e
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    match_2020_stp26
    Status:
    Status: Failed
    Job identifier:
    txpindyqcmdqwven
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    match_2020_stp27
    Status:
    Status: Failed
    Job identifier:
    55vfwejmp365hmrd
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    match_2020_stp35
    Status:
    Status: Failed
    Job identifier:
    nxog6disjmmmghza
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    match_2020_stp36
    Status:
    Status: Failed
    Job identifier:
    i54p3cq625xu4dce
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    match_2020_stp37
    Status:
    Status: Failed
    Job identifier:
    vg4ja3mqmvnfxhzm
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    match_2020_stp40
    Status:
    Status: Failed
    Job identifier:
    w42ncrk7oshasjho
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    match_2020_stp49
    Status:
    Status: Failed
    Job identifier:
    uiod6lt5zxliskio
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    combine_stps_matches_2020
    Status:
    Status: Failed
    Job identifier:
    mmusywrdiuu2bar6
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    match_2020_stp23
    Status:
    Status: Failed
    Job identifier:
    tucoxyqjokajmduu
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    split_stps_2020
    Status:
    Status: Failed
    Job identifier:
    7tt74i53ytoafmja
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    match_2020_stp24
    Status:
    Status: Failed
    Job identifier:
    d2433jx2qwx74iog
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    match_2020_stp25
    Status:
    Status: Failed
    Job identifier:
    pkbzxvic3xil6tad
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    match_2020_stp17
    Status:
    Status: Failed
    Job identifier:
    lso2zgacnfnqhj4w
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    match_2020_stp20
    Status:
    Status: Failed
    Job identifier:
    rcs4jifaag5on3s3
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    match_2020_stp21
    Status:
    Status: Failed
    Job identifier:
    ze2pd2cvte3skzxi
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    match_2020_stp22
    Status:
    Status: Failed
    Job identifier:
    ikfwhigsjr5fft24
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    match_2020_stp15
    Status:
    Status: Failed
    Job identifier:
    vohve52xzmdr4a6k
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    match_2020_stp16
    Status:
    Status: Failed
    Job identifier:
    picp4dmpjqwfmaff
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    match_2020_stp14
    Status:
    Status: Failed
    Job identifier:
    ljiwprszqnsmgi4t
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    match_2020_stp10
    Status:
    Status: Failed
    Job identifier:
    tsirxn7su6jr2kra
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    match_2020_stp12
    Status:
    Status: Failed
    Job identifier:
    cc44pqy6zlj5ezwc
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    clean_2020_matching
    Status:
    Status: Failed
    Job identifier:
    ikcvxkspmruazwmx
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    match_2020_stp13
    Status:
    Status: Failed
    Job identifier:
    uyjcnjj43s2qpqzy
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    match_2020_stp9
    Status:
    Status: Failed
    Job identifier:
    dxzkzliew4y2pg6j
    Error:
    dependency_failed: Not starting as dependency failed

Pipeline

Show project.yaml
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Timeline

  • Created:

  • Started:

  • Finished:

  • Runtime: 00:13:14

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job information

Status
Failed
Backend
TPP
Requested by
Viyaasan Mahalingasivam
Branch
main
Force run dependencies
No
Git commit hash
6126f6e
Requested actions
  • clean_covid_matching_2020
  • clean_2020_matching
  • split_stps_2020
  • match_2020_stp5
  • match_2020_stp6
  • match_2020_stp7
  • match_2020_stp8
  • match_2020_stp9
  • match_2020_stp10
  • match_2020_stp12
  • match_2020_stp13
  • match_2020_stp14
  • match_2020_stp15
  • match_2020_stp16
  • match_2020_stp17
  • match_2020_stp20
  • match_2020_stp21
  • match_2020_stp22
  • match_2020_stp23
  • match_2020_stp24
  • match_2020_stp25
  • match_2020_stp26
  • match_2020_stp27
  • match_2020_stp29
  • match_2020_stp33
  • match_2020_stp35
  • match_2020_stp36
  • match_2020_stp37
  • match_2020_stp40
  • match_2020_stp41
  • match_2020_stp42
  • match_2020_stp43
  • match_2020_stp44
  • match_2020_stp49
  • combine_stps_covid_2020
  • combine_stps_matches_2020
  • extract_asthma_matching_2020
  • extract_2020_matching_asthma

Code comparison

Compare the code used in this Job Request