Skip to content

Job request: 23501

Organisation:
The London School of Hygiene & Tropical Medicine
Workspace:
long_term_kidney_outcomes_after_covid
ID:
n3obdct6rcodwpxy
View repo View project.yaml

This page shows the technical details of what happened when the authorised researcher Viyaasan Mahalingasivam requested one or more actions to be run against real patient data within a secure environment.

By cross-referencing the list of jobs with the pipeline section below, you can infer what security level the outputs were written to.

The output security levels are:

  • highly_sensitive
    • Researchers can never directly view these outputs
    • Researchers can only request code is run against them
  • moderately_sensitive
    • Can be viewed by an approved researcher by logging into a highly secure environment
    • These are the only outputs that can be requested for public release via a controlled output review service.

Jobs

  • Action:
    descriptive_asthma_ethnicity_2017
    Status:
    Succeeded
    Job identifier:
    p5o6fexablvfekcw
  • Action:
    descriptive_asthma_ethnicity_2020
    Status:
    Failed
    Job identifier:
    l2yyrlqxpg4s6sxe
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    descriptive_cca_asthma_ethnicity_2017
    Status:
    Failed
    Job identifier:
    il5ikf5i6izekrvw
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    descriptive_cca_asthma_ethnicity_2020
    Status:
    Failed
    Job identifier:
    xj364w2k5hsxjpul
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    descriptive_asthma_ethnicity_severity_2017
    Status:
    Failed
    Job identifier:
    opmpswmdemhzhbv6
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    descriptive_asthma_ethnicity_severity_2020
    Status:
    Failed
    Job identifier:
    52d5g6wvjsezycft
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    descriptive_cca_asthma_ethnicity_severity_2017
    Status:
    Failed
    Job identifier:
    scthxgsi2qz5lpxr
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    descriptive_cca_asthma_ethnicity_severity_2020
    Status:
    Failed
    Job identifier:
    7jrpepbixhyre3rb
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    descriptive_cabg_ethnicity_2017
    Status:
    Succeeded
    Job identifier:
    wydsqzo5s64b67rj
  • Action:
    descriptive_cabg_ethnicity_2020
    Status:
    Failed
    Job identifier:
    7k65m5kv2unv2fv7
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    descriptive_cca_cabg_ethnicity_2017
    Status:
    Failed
    Job identifier:
    fqknjidzsvloyri6
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    descriptive_cca_cabg_ethnicity_2020
    Status:
    Failed
    Job identifier:
    42ei6gld2nubmmuj
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    descriptive_cabg_ethnicity_severity_2017
    Status:
    Failed
    Job identifier:
    7kudqanoennk6goz
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    descriptive_cabg_ethnicity_severity_2020
    Status:
    Failed
    Job identifier:
    hw7okpdh6fkjt3ln
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    descriptive_cca_cabg_ethnicity_severity_2017
    Status:
    Failed
    Job identifier:
    5g7knkgjev5pky3f
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    descriptive_cca_cabg_ethnicity_severity_2020
    Status:
    Failed
    Job identifier:
    7i5fxeldq4aag4wz
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    descriptive_pneumonia_ethnicity_2017
    Status:
    Succeeded
    Job identifier:
    wa6ovp5flpkfbel6
  • Action:
    descriptive_cca_pneumonia_ethnicity_2017
    Status:
    Failed
    Job identifier:
    5ukvucx2i2fchjyv
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    descriptive_pneumonia_ethnicity_severity_2017
    Status:
    Failed
    Job identifier:
    kbjsdzmc35k3kout
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    descriptive_cca_pneumonia_ethnicity_severity_2017
    Status:
    Failed
    Job identifier:
    ym75arxvpe5nrzx4
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    covariates_esrd_2020
    Status:
    Succeeded
    Job identifier:
    77vx7vkz3drvb6d3
  • Action:
    covariates_esrd_2017
    Status:
    Succeeded
    Job identifier:
    lo4x3rhelhml3xqd
  • Action:
    covariates_death_2020
    Status:
    Succeeded
    Job identifier:
    l5f4i7ynz6zzm2l4
  • Action:
    covariates_death_2017
    Status:
    Succeeded
    Job identifier:
    rsog7qpq2ooujzf7
  • Action:
    covariates_egfr_half_2020
    Status:
    Succeeded
    Job identifier:
    cunl5yaf4smdu5m7
  • Action:
    covariates_egfr_half_2017
    Status:
    Succeeded
    Job identifier:
    yrdwbs2hlpeicsd3
  • Action:
    covariates_esrd_severity_2020
    Status:
    Succeeded
    Job identifier:
    yjukn6hrioupx5x3
  • Action:
    covariates_esrd_severity_2017
    Status:
    Succeeded
    Job identifier:
    xahsdo264jkg4fvw
  • Action:
    covariates_death_severity_2020
    Status:
    Succeeded
    Job identifier:
    kd3mar22wj6saatc
  • Action:
    covariates_death_severity_2017
    Status:
    Succeeded
    Job identifier:
    wksv3ekdxiilys6v
  • Action:
    covariates_egfr_half_severity_2020
    Status:
    Succeeded
    Job identifier:
    2nydjbvnevnhkmmv
  • Action:
    covariates_egfr_half_severity_2017
    Status:
    Succeeded
    Job identifier:
    q6jzhzma6tixv3db

Pipeline

Show project.yaml
This file is too large to render, try viewing it on GitHub .

Timeline

  • Created:

  • Started:

  • Finished:

  • Runtime: 04:05:35

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job request

Status
Failed
Backend
TPP
Workspace
long_term_kidney_outcomes_after_covid
Requested by
Viyaasan Mahalingasivam
Branch
main
Force run dependencies
No
Git commit hash
4a3abcf
Requested actions
  • descriptive_asthma_ethnicity_2017
  • descriptive_asthma_ethnicity_2020
  • descriptive_cca_asthma_ethnicity_2017
  • descriptive_cca_asthma_ethnicity_2020
  • descriptive_asthma_ethnicity_severity_2017
  • descriptive_asthma_ethnicity_severity_2020
  • descriptive_cca_asthma_ethnicity_severity_2017
  • descriptive_cca_asthma_ethnicity_severity_2020
  • descriptive_cabg_ethnicity_2017
  • descriptive_cabg_ethnicity_2020
  • descriptive_cca_cabg_ethnicity_2017
  • descriptive_cca_cabg_ethnicity_2020
  • descriptive_cabg_ethnicity_severity_2017
  • descriptive_cabg_ethnicity_severity_2020
  • descriptive_cca_cabg_ethnicity_severity_2017
  • descriptive_cca_cabg_ethnicity_severity_2020
  • descriptive_pneumonia_ethnicity_2017
  • descriptive_cca_pneumonia_ethnicity_2017
  • descriptive_pneumonia_ethnicity_severity_2017
  • descriptive_cca_pneumonia_ethnicity_severity_2017
  • covariates_esrd_2020
  • covariates_esrd_2017
  • covariates_death_2020
  • covariates_death_2017
  • covariates_egfr_half_2020
  • covariates_egfr_half_2017
  • covariates_esrd_severity_2020
  • covariates_esrd_severity_2017
  • covariates_death_severity_2020
  • covariates_death_severity_2017
  • covariates_egfr_half_severity_2020
  • covariates_egfr_half_severity_2017

Code comparison

Compare the code used in this job request