Job request: 921

View Repo View project.yaml

This page shows the technical details of what happened when authorised researcher Anna Schultze requested one or more actions to be run against real patient data in the Carehomes Short Data Reports project, within a secure environment.

By cross-referencing the indicated Requested Actions with the Pipeline section below, you can infer what security level various outputs were written to. Outputs marked as highly_sensitive can never be viewed directly by a researcher; they can only request that code runs against them. Outputs marked as moderately_sensitive can be viewed by an approved researcher by logging into a highly secure environment. Only outputs marked as moderately_sensitive can be requested for release to the public, via a controlled output review service.

Jobs

ID Status Action
zfojwj2bgcwocluo succeeded 01_cross_tabulations
mn4rwxzhv765afbh succeeded 02_characteristics

Pipeline

Show Hide project.yaml
version: '3.0'

expectations:
  population_size: 1000

actions:

  00_generate_cohort:
    run: cohortextractor:latest generate_cohort --study-definition study_definition
    outputs:
      highly_sensitive:
        cohort: output/input.csv

  01_cross_tabulations:
    run: r:latest analysis/01_cross_tabulations.R 
    needs: [00_generate_cohort]
    outputs:
      highly_sensitive: 
        data: output/study_population.csv
      moderately_sensitive:
        log: analysis/outfiles/01_cross_tabulations.txt

  02_characteristics:
    run: r:latest analysis/02_characteristics.R 
    needs: [01_cross_tabulations]
    outputs:
      moderately_sensitive:
        log: analysis/outfiles/02_characteristics.txt

State

State is inferred from the related Jobs.

Status: Succeeded

Timings

Timings set to UTC timezone.

  • Created:
  • Started:
  • Finished:
  • Runtime: 00:01:28

Config