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Job request: 346

Organisation:
NHSX
Workspace:
vaccine-eligibility
ID:
e7tzkq4c5gxgqy2j

This page shows the technical details of what happened when authorised researcher Will Hulme requested one or more actions to be run against real patient data in the project, within a secure environment.

By cross-referencing the indicated Requested Actions with the Pipeline section below, you can infer what security level various outputs were written to. Outputs marked as highly_sensitive can never be viewed directly by a researcher; they can only request that code runs against them. Outputs marked as moderately_sensitive can be viewed by an approved researcher by logging into a highly secure environment. Only outputs marked as moderately_sensitive can be requested for release to the public, via a controlled output review service.

Jobs

  • Action:
    run_notebook
    Status:
    Status: Failed
    Job identifier:
    i5dg2zow275a3g3m

Pipeline

Show project.yaml
version: '3.0'

expectations:
  population_size: 10000

actions:

  generate_cohort:
    run: cohortextractor:latest generate_cohort --study-definition study_definition
    outputs:
      highly_sensitive:
        cohort: output/input.csv

  run_notebook:
    run: jupyter:latest jupyter nbconvert analysis/Study_analysis.ipynb --execute --to html --output-dir=output --ExecutePreprocessor.timeout=86400
    needs: [generate_cohort]
    outputs:
      moderately_sensitive:
        notebook: output/Study_analysis.html

Timeline

  • Created:

  • Started:

  • Finished:

  • Runtime: 00:00:02

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job information

Status
Failed
Backend
TPP
Requested by
Will Hulme
Branch
will-run
Force run dependencies
No
Git commit hash
61d8e67
Requested actions
  • run_notebook

Code comparison

Compare the code used in this Job Request