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Job request: 26610

Organisation:
University of Manchester
Workspace:
openpregnosis_main
ID:
kfuqctfhjdgaxd7g
View repo View project.yaml

This page shows the technical details of what happened when the authorised researcher Paolo Mazzone requested one or more actions to be run against real patient data within a secure environment.

By cross-referencing the list of jobs with the pipeline section below, you can infer what security level the outputs were written to.

The output security levels are:

  • highly_sensitive
    • Researchers can never directly view these outputs
    • Researchers can only request code is run against them
  • moderately_sensitive
    • Can be viewed by an approved researcher by logging into a highly secure environment
    • These are the only outputs that can be requested for public release via a controlled output review service.

Jobs

  • Action:
    export_codelists_for_r
    Status:
    Succeeded
    Job identifier:
    ogabtj3fvbtfeuvn
  • Action:
    miscarriage_stillbirth_overlap_sdr
    Status:
    Succeeded
    Job identifier:
    gs66k47kvco4tzbe
  • Action:
    pc_vs_pc_hes_step4_outcome_comparison
    Status:
    Pending
    Job identifier:
    cskpuzjeoosdbz3d
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    post_outcome_edd_recovery_impact_sdr
    Status:
    Pending
    Job identifier:
    qsrxbey7eyvcqe5n
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    pregnancy_algorithm_sdr_pc_hes
    Status:
    Pending
    Job identifier:
    3qy653lnb2brylfh
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    archive_moderate_outputs_v22
    Status:
    Pending
    Job identifier:
    waspb65osixe5qi2
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    sdr_step2b_row_fix_sensitivity_pc_hes
    Status:
    Pending
    Job identifier:
    dxpcopv5e5usxi6w
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    convert_hes_multiple_gestation_episodes
    Status:
    Pending
    Job identifier:
    fvjjyvvbtsvgmumj
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    sdr_step2b_cluster_composition_pc_hes
    Status:
    Pending
    Job identifier:
    tkyvqjjmmyy6fo2d
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    sdr_weak_delivery_context_breakdown_pc_hes
    Status:
    Pending
    Job identifier:
    x3iz6wlcy7untn5e
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    sdr_admission_only_livebirth_drop_pc_hes
    Status:
    Pending
    Job identifier:
    mt5pxpugdbgl4ee5
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    sdr_episode_age_plausibility_pc_hes
    Status:
    Pending
    Job identifier:
    hr33lovswl5edshm
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    sdr_fetal_death_opcs_sensitivity_pc_hes
    Status:
    Pending
    Job identifier:
    fdfotjwf3xm7halq
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    sdr_miscarriage_delivery_context_counterfactual_pc_hes
    Status:
    Pending
    Job identifier:
    k2vhbaksy76b7jvk
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    pc_hes_decision_support_sdr
    Status:
    Pending
    Job identifier:
    fsiq4fx525fqzgc7
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    algorithm_step_3c_pc_hes
    Status:
    Pending
    Job identifier:
    o4jw3s5mzy5bm4qv
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    sdr_step2b_age_sex_counterfactual_pc_hes
    Status:
    Pending
    Job identifier:
    pyzy6ln6nx4erwyk
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    early_loss_code_contribution_sdr_pc_hes
    Status:
    Pending
    Job identifier:
    yjn3y2ftg34kbzml
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    algorithm_step_2e_pc_hes
    Status:
    Pending
    Job identifier:
    cdzmzhvt4o7idflb
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    pc_vs_pc_hes_step2b_cluster_stream_summary
    Status:
    Pending
    Job identifier:
    uvbt4rqkbgpsrses
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    pc_vs_pc_hes_step2d_start_source_summary
    Status:
    Pending
    Job identifier:
    7iy5dbvny5na5ugo
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    pc_vs_pc_hes_step2e_mode_preterm_by_cluster_source
    Status:
    Pending
    Job identifier:
    ohguuv4iwkvp4h2o
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    pc_vs_pc_hes_step4_episode_outcome_stream_summary
    Status:
    Pending
    Job identifier:
    5o4schou3jx7ndxk
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    pregnancy_snomed_outcome_distance_sdr_pc_hes
    Status:
    Pending
    Job identifier:
    gi42g25jggp7b5ok
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    sdr_admission_only_episode_count_pc_hes
    Status:
    Pending
    Job identifier:
    dvepeshxrob2rdax
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    outcome_measures_validation_sdr_pc_hes
    Status:
    Pending
    Job identifier:
    l5z7gmln45hfl5ay
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    pc_vs_pc_hes_comparison_sdr
    Status:
    Pending
    Job identifier:
    z6lwhf3ifiszjfo2
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    chronic_conditions_prevalence_sdr_pc_hes
    Status:
    Pending
    Job identifier:
    qo7t2lxdqswh2lgg
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    demographics_outcomes_by_ethnicity_age_imd_sdr_pc_hes
    Status:
    Pending
    Job identifier:
    xail3z77bkr5djq5
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    diagnostic_boundary_censor_pc_hes
    Status:
    Pending
    Job identifier:
    cxzdzsljbvjg5jln
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    ethnicity_outcomes_by_category_sdr_pc_hes
    Status:
    Pending
    Job identifier:
    7zkjhtrmv5b2ycx6
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    generate_hes_diagnostic_event_counts
    Status:
    Pending
    Job identifier:
    shsy55ocdskhzoef
    Status message:
    waiting_db_maintenance: Waiting for database to finish maintenance
  • Action:
    antenatal_preterm_pipeline_counts_sdr_pc_hes
    Status:
    Pending
    Job identifier:
    l55egs6xxo5j26wm
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    clean_episodes_chronic_conditions
    Status:
    Pending
    Job identifier:
    uasoli4vmyayakbm
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    algorithm_step_3b_pc_hes
    Status:
    Pending
    Job identifier:
    rhrcatzld6dlf3ly
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    algorithm_step_3d_pc_hes
    Status:
    Pending
    Job identifier:
    s4przgzdu5pcjf6e
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    algorithm_step_4_pc_hes
    Status:
    Pending
    Job identifier:
    zcbnrbn2r3gb2bdi
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    analyze_hes_diagnostic_event_counts
    Status:
    Pending
    Job identifier:
    ithl3utauvdmlt3v
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    clean_episodes_maternal_age_imd_ethnicity
    Status:
    Pending
    Job identifier:
    htdvalcle4etonim
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    miscarriage_source_mix_by_year_sdr_pc_hes
    Status:
    Pending
    Job identifier:
    hiyijwzamk4nbdeg
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    algorithm_step_1_pc_hes
    Status:
    Pending
    Job identifier:
    6cfukjplagfmyre6
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    algorithm_step_2a_pc_hes
    Status:
    Pending
    Job identifier:
    gnykvcvrsvu6fv2x
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    algorithm_step_2b_pc_hes
    Status:
    Pending
    Job identifier:
    ad2dlpp3ysw7urkw
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    algorithm_step_2d_pc_hes
    Status:
    Pending
    Job identifier:
    nrdko5jodhjgab5m
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    algorithm_step_3a_pc_hes
    Status:
    Pending
    Job identifier:
    rnj52rzf4pn6md7k
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    generate_hes_multiple_gestation_data
    Status:
    Pending
    Job identifier:
    zirzbanya2c3rzj3
    Status message:
    waiting_db_maintenance: Waiting for database to finish maintenance

Pipeline

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Job statistics

Status Count Percentage
Pending 44 95.7%
Running 0 0%
Succeeded 2 4.3%
Failed 0 0%

2 / 46 (4.3%) complete

Timeline

  • Created:

  • Started:

  • Runtime: 00:03:55

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job request

Status
Running
Backend
TPP
Workspace
openpregnosis_main
Requested by
Paolo Mazzone
Branch
main
Force run dependencies
No
Git commit hash
9c1a972
Requested actions
  • export_codelists_for_r
  • pregnancy_snomed_outcome_distance_sdr_pc_hes
  • clean_episodes_maternal_age_imd_ethnicity
  • ethnicity_outcomes_by_category_sdr_pc_hes
  • demographics_outcomes_by_ethnicity_age_imd_sdr_pc_hes
  • clean_episodes_chronic_conditions
  • chronic_conditions_prevalence_sdr_pc_hes
  • outcome_measures_validation_sdr_pc_hes
  • miscarriage_source_mix_by_year_sdr_pc_hes
  • early_loss_code_contribution_sdr_pc_hes
  • pc_vs_pc_hes_comparison_sdr
  • pc_hes_decision_support_sdr
  • post_outcome_edd_recovery_impact_sdr
  • antenatal_preterm_pipeline_counts_sdr_pc_hes
  • miscarriage_stillbirth_overlap_sdr
  • algorithm_step_1_pc_hes
  • algorithm_step_2a_pc_hes
  • algorithm_step_2b_pc_hes
  • algorithm_step_2d_pc_hes
  • diagnostic_boundary_censor_pc_hes
  • algorithm_step_2e_pc_hes
  • algorithm_step_3a_pc_hes
  • algorithm_step_3b_pc_hes
  • algorithm_step_3c_pc_hes
  • algorithm_step_3d_pc_hes
  • algorithm_step_4_pc_hes
  • pc_vs_pc_hes_step4_outcome_comparison
  • pc_vs_pc_hes_step2b_cluster_stream_summary
  • pc_vs_pc_hes_step2d_start_source_summary
  • pc_vs_pc_hes_step2e_mode_preterm_by_cluster_source
  • pc_vs_pc_hes_step4_episode_outcome_stream_summary
  • pregnancy_algorithm_sdr_pc_hes
  • sdr_fetal_death_opcs_sensitivity_pc_hes
  • sdr_step2b_row_fix_sensitivity_pc_hes
  • sdr_admission_only_episode_count_pc_hes
  • sdr_miscarriage_delivery_context_counterfactual_pc_hes
  • sdr_weak_delivery_context_breakdown_pc_hes
  • sdr_episode_age_plausibility_pc_hes
  • sdr_step2b_age_sex_counterfactual_pc_hes
  • sdr_step2b_cluster_composition_pc_hes
  • sdr_admission_only_livebirth_drop_pc_hes
  • generate_hes_diagnostic_event_counts
  • analyze_hes_diagnostic_event_counts
  • generate_hes_multiple_gestation_data
  • convert_hes_multiple_gestation_episodes
  • archive_moderate_outputs_v22

Code comparison

Compare the code used in this job request