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Job request: 26610

Organisation:
University of Manchester
Workspace:
openpregnosis_main
ID:
kfuqctfhjdgaxd7g
View repo View project.yaml

This page shows the technical details of what happened when the authorised researcher Paolo Mazzone requested one or more actions to be run against real patient data within a secure environment.

By cross-referencing the list of jobs with the pipeline section below, you can infer what security level the outputs were written to.

The output security levels are:

  • highly_sensitive
    • Researchers can never directly view these outputs
    • Researchers can only request code is run against them
  • moderately_sensitive
    • Can be viewed by an approved researcher by logging into a highly secure environment
    • These are the only outputs that can be requested for public release via a controlled output review service.

Jobs

  • Action:
    export_codelists_for_r
    Status:
    Succeeded
    Job identifier:
    ogabtj3fvbtfeuvn
  • Action:
    miscarriage_stillbirth_overlap_sdr
    Status:
    Succeeded
    Job identifier:
    gs66k47kvco4tzbe
  • Action:
    generate_hes_diagnostic_event_counts
    Status:
    Succeeded
    Job identifier:
    shsy55ocdskhzoef
  • Action:
    analyze_hes_diagnostic_event_counts
    Status:
    Succeeded
    Job identifier:
    ithl3utauvdmlt3v
  • Action:
    generate_hes_multiple_gestation_data
    Status:
    Succeeded
    Job identifier:
    zirzbanya2c3rzj3
  • Action:
    convert_hes_multiple_gestation_episodes
    Status:
    Succeeded
    Job identifier:
    fvjjyvvbtsvgmumj
  • Action:
    algorithm_step_1_pc_hes
    Status:
    Succeeded
    Job identifier:
    6cfukjplagfmyre6
  • Action:
    algorithm_step_2a_pc_hes
    Status:
    Succeeded
    Job identifier:
    gnykvcvrsvu6fv2x
  • Action:
    algorithm_step_2b_pc_hes
    Status:
    Succeeded
    Job identifier:
    ad2dlpp3ysw7urkw
  • Action:
    algorithm_step_2d_pc_hes
    Status:
    Succeeded
    Job identifier:
    nrdko5jodhjgab5m
  • Action:
    pc_vs_pc_hes_step2b_cluster_stream_summary
    Status:
    Succeeded
    Job identifier:
    uvbt4rqkbgpsrses
  • Action:
    algorithm_step_2e_pc_hes
    Status:
    Succeeded
    Job identifier:
    cdzmzhvt4o7idflb
  • Action:
    pc_vs_pc_hes_step2d_start_source_summary
    Status:
    Succeeded
    Job identifier:
    7iy5dbvny5na5ugo
  • Action:
    algorithm_step_3a_pc_hes
    Status:
    Succeeded
    Job identifier:
    rnj52rzf4pn6md7k
  • Action:
    antenatal_preterm_pipeline_counts_sdr_pc_hes
    Status:
    Succeeded
    Job identifier:
    l55egs6xxo5j26wm
  • Action:
    diagnostic_boundary_censor_pc_hes
    Status:
    Succeeded
    Job identifier:
    cxzdzsljbvjg5jln
  • Action:
    pc_hes_decision_support_sdr
    Status:
    Succeeded
    Job identifier:
    fsiq4fx525fqzgc7
  • Action:
    pc_vs_pc_hes_step2e_mode_preterm_by_cluster_source
    Status:
    Succeeded
    Job identifier:
    ohguuv4iwkvp4h2o
  • Action:
    post_outcome_edd_recovery_impact_sdr
    Status:
    Succeeded
    Job identifier:
    qsrxbey7eyvcqe5n
  • Action:
    pregnancy_algorithm_sdr_pc_hes
    Status:
    Succeeded
    Job identifier:
    3qy653lnb2brylfh
  • Action:
    algorithm_step_3b_pc_hes
    Status:
    Succeeded
    Job identifier:
    rhrcatzld6dlf3ly
  • Action:
    algorithm_step_3c_pc_hes
    Status:
    Succeeded
    Job identifier:
    o4jw3s5mzy5bm4qv
  • Action:
    algorithm_step_3d_pc_hes
    Status:
    Succeeded
    Job identifier:
    s4przgzdu5pcjf6e
  • Action:
    algorithm_step_4_pc_hes
    Status:
    Succeeded
    Job identifier:
    zcbnrbn2r3gb2bdi
  • Action:
    clean_episodes_maternal_age_imd_ethnicity
    Status:
    Succeeded
    Job identifier:
    htdvalcle4etonim
  • Action:
    early_loss_code_contribution_sdr_pc_hes
    Status:
    Succeeded
    Job identifier:
    yjn3y2ftg34kbzml
  • Action:
    miscarriage_source_mix_by_year_sdr_pc_hes
    Status:
    Succeeded
    Job identifier:
    hiyijwzamk4nbdeg
  • Action:
    pc_vs_pc_hes_comparison_sdr
    Status:
    Succeeded
    Job identifier:
    z6lwhf3ifiszjfo2
  • Action:
    pc_vs_pc_hes_step4_episode_outcome_stream_summary
    Status:
    Succeeded
    Job identifier:
    5o4schou3jx7ndxk
  • Action:
    pc_vs_pc_hes_step4_outcome_comparison
    Status:
    Failed
    Job identifier:
    cskpuzjeoosdbz3d
    Status message:
    nonzero_exit: Job exited with an error
  • Action:
    pregnancy_snomed_outcome_distance_sdr_pc_hes
    Status:
    Succeeded
    Job identifier:
    gi42g25jggp7b5ok
  • Action:
    sdr_admission_only_episode_count_pc_hes
    Status:
    Succeeded
    Job identifier:
    dvepeshxrob2rdax
  • Action:
    sdr_admission_only_livebirth_drop_pc_hes
    Status:
    Succeeded
    Job identifier:
    mt5pxpugdbgl4ee5
  • Action:
    sdr_episode_age_plausibility_pc_hes
    Status:
    Succeeded
    Job identifier:
    hr33lovswl5edshm
  • Action:
    sdr_fetal_death_opcs_sensitivity_pc_hes
    Status:
    Succeeded
    Job identifier:
    fdfotjwf3xm7halq
  • Action:
    sdr_miscarriage_delivery_context_counterfactual_pc_hes
    Status:
    Succeeded
    Job identifier:
    k2vhbaksy76b7jvk
  • Action:
    sdr_step2b_age_sex_counterfactual_pc_hes
    Status:
    Succeeded
    Job identifier:
    pyzy6ln6nx4erwyk
  • Action:
    sdr_step2b_cluster_composition_pc_hes
    Status:
    Succeeded
    Job identifier:
    tkyvqjjmmyy6fo2d
  • Action:
    sdr_step2b_row_fix_sensitivity_pc_hes
    Status:
    Succeeded
    Job identifier:
    dxpcopv5e5usxi6w
  • Action:
    sdr_weak_delivery_context_breakdown_pc_hes
    Status:
    Succeeded
    Job identifier:
    x3iz6wlcy7untn5e
  • Action:
    archive_moderate_outputs_v22
    Status:
    Succeeded
    Job identifier:
    waspb65osixe5qi2
  • Action:
    clean_episodes_chronic_conditions
    Status:
    Succeeded
    Job identifier:
    uasoli4vmyayakbm
  • Action:
    ethnicity_outcomes_by_category_sdr_pc_hes
    Status:
    Succeeded
    Job identifier:
    7zkjhtrmv5b2ycx6
  • Action:
    demographics_outcomes_by_ethnicity_age_imd_sdr_pc_hes
    Status:
    Succeeded
    Job identifier:
    xail3z77bkr5djq5
  • Action:
    chronic_conditions_prevalence_sdr_pc_hes
    Status:
    Succeeded
    Job identifier:
    qo7t2lxdqswh2lgg
  • Action:
    outcome_measures_validation_sdr_pc_hes
    Status:
    Succeeded
    Job identifier:
    l5z7gmln45hfl5ay

Pipeline

Show project.yaml
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Job statistics

Status Count Percentage
Pending 0 0%
Running 0 0%
Succeeded 45 97.8%
Failed 1 2.2%

46 / 46 (100%) complete

Timeline

  • Created:

  • Started:

  • Finished:

  • Runtime: 92:34:51

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job request

Status
Failed
Backend
TPP
Workspace
openpregnosis_main
Requested by
Paolo Mazzone
Branch
main
Force run dependencies
No
Git commit hash
9c1a972
Requested actions
  • export_codelists_for_r
  • pregnancy_snomed_outcome_distance_sdr_pc_hes
  • clean_episodes_maternal_age_imd_ethnicity
  • ethnicity_outcomes_by_category_sdr_pc_hes
  • demographics_outcomes_by_ethnicity_age_imd_sdr_pc_hes
  • clean_episodes_chronic_conditions
  • chronic_conditions_prevalence_sdr_pc_hes
  • outcome_measures_validation_sdr_pc_hes
  • miscarriage_source_mix_by_year_sdr_pc_hes
  • early_loss_code_contribution_sdr_pc_hes
  • pc_vs_pc_hes_comparison_sdr
  • pc_hes_decision_support_sdr
  • post_outcome_edd_recovery_impact_sdr
  • antenatal_preterm_pipeline_counts_sdr_pc_hes
  • miscarriage_stillbirth_overlap_sdr
  • algorithm_step_1_pc_hes
  • algorithm_step_2a_pc_hes
  • algorithm_step_2b_pc_hes
  • algorithm_step_2d_pc_hes
  • diagnostic_boundary_censor_pc_hes
  • algorithm_step_2e_pc_hes
  • algorithm_step_3a_pc_hes
  • algorithm_step_3b_pc_hes
  • algorithm_step_3c_pc_hes
  • algorithm_step_3d_pc_hes
  • algorithm_step_4_pc_hes
  • pc_vs_pc_hes_step4_outcome_comparison
  • pc_vs_pc_hes_step2b_cluster_stream_summary
  • pc_vs_pc_hes_step2d_start_source_summary
  • pc_vs_pc_hes_step2e_mode_preterm_by_cluster_source
  • pc_vs_pc_hes_step4_episode_outcome_stream_summary
  • pregnancy_algorithm_sdr_pc_hes
  • sdr_fetal_death_opcs_sensitivity_pc_hes
  • sdr_step2b_row_fix_sensitivity_pc_hes
  • sdr_admission_only_episode_count_pc_hes
  • sdr_miscarriage_delivery_context_counterfactual_pc_hes
  • sdr_weak_delivery_context_breakdown_pc_hes
  • sdr_episode_age_plausibility_pc_hes
  • sdr_step2b_age_sex_counterfactual_pc_hes
  • sdr_step2b_cluster_composition_pc_hes
  • sdr_admission_only_livebirth_drop_pc_hes
  • generate_hes_diagnostic_event_counts
  • analyze_hes_diagnostic_event_counts
  • generate_hes_multiple_gestation_data
  • convert_hes_multiple_gestation_episodes
  • archive_moderate_outputs_v22

Code comparison

Compare the code used in this job request