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Job request: 26854

Organisation:
University of Manchester
Workspace:
openpregnosis_longitudinal_main
ID:
fqbvqyiumjaz47du
View repo View project.yaml

This page shows the technical details of what happened when the authorised researcher Paolo Mazzone requested one or more actions to be run against real patient data within a secure environment.

By cross-referencing the list of jobs with the pipeline section below, you can infer what security level the outputs were written to.

The output security levels are:

  • highly_sensitive
    • Researchers can never directly view these outputs
    • Researchers can only request code is run against them
  • moderately_sensitive
    • Can be viewed by an approved researcher by logging into a highly secure environment
    • These are the only outputs that can be requested for public release via a controlled output review service.

Jobs

  • Action:
    generate_diagnostic_event_counts
    Status:
    Succeeded
    Job identifier:
    vkef2p6xylha2zoe
  • Action:
    analyse_chronic_conditions_pc_diagnostic
    Status:
    Succeeded
    Job identifier:
    wt344kzldl46z3y3
  • Action:
    export_codelists_for_r
    Status:
    Succeeded
    Job identifier:
    hm4fa6uugx2ql4op
  • Action:
    generate_asthma_pc_data_2009_2013
    Status:
    Succeeded
    Job identifier:
    bofdtlw724qijo2v
  • Action:
    analyze_diagnostic_event_counts
    Status:
    Succeeded
    Job identifier:
    qw6dquwdmcofdbzi
  • Action:
    generate_early_markers_data_2009_2013
    Status:
    Succeeded
    Job identifier:
    ylho73vmy4yc2dlh
  • Action:
    generate_early_markers_data_2014_2018
    Status:
    Succeeded
    Job identifier:
    oqj5b6effn6on3te
  • Action:
    generate_early_markers_data_2019_2026
    Status:
    Succeeded
    Job identifier:
    jufvhs5n5fxzhsxo
  • Action:
    generate_early_ga_numeric_markers_data_2009_2013
    Status:
    Succeeded
    Job identifier:
    qxmnkcw5czo3r2qe
  • Action:
    convert_edc_episodes
    Status:
    Succeeded
    Job identifier:
    yfmprdk7conytbmw
  • Action:
    convert_edd_episodes
    Status:
    Succeeded
    Job identifier:
    c3ybyellojf5fxf7
  • Action:
    convert_lmp_episodes
    Status:
    Succeeded
    Job identifier:
    cafuz5pg2xdlw2ac
  • Action:
    generate_early_ga_numeric_markers_data_2014_2018
    Status:
    Succeeded
    Job identifier:
    gjfrau6fibt2g7sr
  • Action:
    dating_numeric_value_profiling_sdr
    Status:
    Running
    Job identifier:
    j76unm6vhitqgyd3
  • Action:
    generate_early_ga_numeric_markers_data_2019_2026
    Status:
    Succeeded
    Job identifier:
    75cjjd2ih5i6elp7
  • Action:
    generate_asthma_pc_data_2014_2018
    Status:
    Succeeded
    Job identifier:
    et4enpaqfvfhwb7d
  • Action:
    convert_antenatal_ga_timed
    Status:
    Succeeded
    Job identifier:
    zou4tt7t2hovvvas
  • Action:
    convert_antenatal_ga_window
    Status:
    Succeeded
    Job identifier:
    jnhqvqa3b4ebmoa2
  • Action:
    convert_birth_ga_timed
    Status:
    Succeeded
    Job identifier:
    x35xteqbruqujcf3
  • Action:
    convert_birth_ga_window
    Status:
    Succeeded
    Job identifier:
    slr353uqfhr2h6ac
  • Action:
    convert_ga_numeric_fallback
    Status:
    Succeeded
    Job identifier:
    nsotij55gorz3zpg
  • Action:
    same_day_event_analysis
    Status:
    Succeeded
    Job identifier:
    jt5tm37rvf2xjb3o
  • Action:
    generate_asthma_pc_data_2019_2026
    Status:
    Succeeded
    Job identifier:
    e3srd6dvmkmyrzkh
  • Action:
    algorithm_step_1
    Status:
    Succeeded
    Job identifier:
    6hyvew3ndrwohg25
  • Action:
    algorithm_step_1_pc_hes
    Status:
    Succeeded
    Job identifier:
    sjfycw57nunuljdd
  • Action:
    numeric_value_profiling_sdr
    Status:
    Succeeded
    Job identifier:
    kbtke7m5imyjg53m
  • Action:
    algorithm_step_2a
    Status:
    Succeeded
    Job identifier:
    za7hsleyzdderhd2
  • Action:
    algorithm_step_2a_pc_hes
    Status:
    Succeeded
    Job identifier:
    zbu2su6ccbx7tmks
  • Action:
    algorithm_step_2b
    Status:
    Running
    Job identifier:
    4tubyj4dl7nldl66
  • Action:
    algorithm_step_2b_pc_hes
    Status:
    Running
    Job identifier:
    e6c2kxj6lh5xbmof
  • Action:
    clean_episodes_maternal_age_imd_ethnicity
    Status:
    Pending
    Job identifier:
    rif4yjgguihf7yb5
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    compare_2019_vs_2009_subset
    Status:
    Pending
    Job identifier:
    p2vdbnjvn4yx4z3z
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    algorithm_step_2d_pc_hes
    Status:
    Pending
    Job identifier:
    llg576a7xrbicwnn
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    algorithm_step_2e
    Status:
    Pending
    Job identifier:
    c324k3jl4k67xijb
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    algorithm_step_3c
    Status:
    Pending
    Job identifier:
    bwsaf4ili4m2g4uq
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    algorithm_step_3c_pc_hes
    Status:
    Pending
    Job identifier:
    2hg4bj4l35cbvbli
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    antenatal_preterm_pipeline_counts_sdr_pc_hes
    Status:
    Pending
    Job identifier:
    3lkxaw6kpkbdbqkm
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    chronic_conditions_prevalence_sdr_pc_hes
    Status:
    Pending
    Job identifier:
    n4g46he3ryoxj7ot
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    compare_pc_hes_episodes
    Status:
    Pending
    Job identifier:
    ppvfzckj52nrfghy
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    diagnostic_boundary_censor_pc_hes
    Status:
    Pending
    Job identifier:
    yzntraycslxexeyq
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    demographics_outcomes_by_ethnicity_age_imd_sdr_pc_hes
    Status:
    Pending
    Job identifier:
    6ikaswy6rloey3yo
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    copy_2009_run_results
    Status:
    Pending
    Job identifier:
    gatomnrieycuvcz2
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    algorithm_step_3d
    Status:
    Pending
    Job identifier:
    pwectz735z4rfhba
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    algorithm_step_3d_pc_hes
    Status:
    Pending
    Job identifier:
    wuqcqwx3yvco2kas
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    algorithm_step_4
    Status:
    Pending
    Job identifier:
    5ohhtie2rv5zjtf4
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    algorithm_step_4_comparison
    Status:
    Pending
    Job identifier:
    xf6gxa5lignlp3jt
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    algorithm_step_4_pc_hes
    Status:
    Pending
    Job identifier:
    yt65bkxzwciz6gqa
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    manuscript_table_10_inter_episode_gap_wide
    Status:
    Pending
    Job identifier:
    jnma5lwhbqfnihdr
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    manuscript_table_14_15_delivery_composition
    Status:
    Pending
    Job identifier:
    imeqwpdp4clv6dg6
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    pc_vs_pc_hes_step2d_start_source_summary
    Status:
    Pending
    Job identifier:
    qbbyq4y2nvma5x3i
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    pc_vs_pc_hes_step2e_mode_preterm_by_cluster_source
    Status:
    Pending
    Job identifier:
    3kwpi6ccwiacxvkp
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    pc_vs_pc_hes_step4_episode_outcome_stream_summary
    Status:
    Pending
    Job identifier:
    niesfufd2e3y6fcn
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    pc_vs_pc_hes_step4_outcome_comparison
    Status:
    Pending
    Job identifier:
    jeedu3icksrf2voc
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    post_outcome_edd_recovery_impact_sdr
    Status:
    Pending
    Job identifier:
    3zvkeihyuvh2ed33
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    pregnancy_algorithm_sdr_pc_hes
    Status:
    Pending
    Job identifier:
    b55nrptcjgtdfnu4
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    pregnancy_finding_code_sdr
    Status:
    Pending
    Job identifier:
    y3ajjb532vm4xlal
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    pregnancy_snomed_outcome_distance_sdr_pc_hes
    Status:
    Pending
    Job identifier:
    efhslpfejzuxwrgq
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    preterm_logic_validation_sdr
    Status:
    Pending
    Job identifier:
    nxozzf7bktbhdedb
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    sdr_admission_only_episode_count_pc_hes
    Status:
    Pending
    Job identifier:
    orrps2zb6inbm7wg
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    sdr_admission_only_livebirth_drop_pc_hes
    Status:
    Pending
    Job identifier:
    gvvuuwzmuqbjpcmt
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    sdr_delivery_plurality
    Status:
    Pending
    Job identifier:
    mbod7cv6fprlxgbu
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    sdr_delivery_plurality_term_order
    Status:
    Pending
    Job identifier:
    fm2hltjci2kaldxy
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    sdr_episode_age_plausibility_pc_hes
    Status:
    Pending
    Job identifier:
    qwvvbwqrkvl2wjo5
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    sdr_miscarriage_delivery_context_counterfactual_pc_hes
    Status:
    Pending
    Job identifier:
    qjchmudy66esyrez
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    sdr_step2b_age_sex_counterfactual_pc_hes
    Status:
    Pending
    Job identifier:
    zwtf5u25cfhfj5im
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    algorithm_step_2e_pc_hes
    Status:
    Pending
    Job identifier:
    qbhm2wnutq4itns2
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    algorithm_step_3a
    Status:
    Pending
    Job identifier:
    7rbxcrzre4mi7hoz
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    algorithm_step_3a_pc_hes
    Status:
    Pending
    Job identifier:
    j23necvwm3kafrug
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    algorithm_step_2b_comparison
    Status:
    Pending
    Job identifier:
    pyclagu4s4caboj4
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    algorithm_step_2b_impact_analysis
    Status:
    Pending
    Job identifier:
    5bajddpk2hcinp7h
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    manuscript_tables_output_1
    Status:
    Pending
    Job identifier:
    barsrlsnay7dp33i
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    miscarriage_source_mix_by_year_sdr_pc_hes
    Status:
    Pending
    Job identifier:
    7pfi6nsmgekdj5ac
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    sdr_fetal_death_opcs_sensitivity_pc_hes
    Status:
    Pending
    Job identifier:
    amirmbsq6foemev3
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    sdr_step2b_cluster_composition_pc_hes
    Status:
    Pending
    Job identifier:
    fzxzensxbjxasejw
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    early_loss_code_contribution_sdr_pc_hes
    Status:
    Pending
    Job identifier:
    73at43utfwe2u5hg
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    ethnicity_outcomes_by_category_sdr_pc_hes
    Status:
    Pending
    Job identifier:
    a6dls6v2dkhpdwdt
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    sdr_weak_delivery_context_breakdown_pc_hes
    Status:
    Pending
    Job identifier:
    w6fr7qgeo25y3czt
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    stillbirth_codelist_sensitivity
    Status:
    Pending
    Job identifier:
    5h4dkplptcjdhfbf
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    timing_event_cluster_range_sdr
    Status:
    Pending
    Job identifier:
    w2z3wf56whvdnrmi
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    algorithm_step_2e_comparison
    Status:
    Pending
    Job identifier:
    ll7ogs6gr3eort3n
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    algorithm_step_3b
    Status:
    Pending
    Job identifier:
    m2ev2ucdpq4oclc4
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    algorithm_step_3b_pc_hes
    Status:
    Pending
    Job identifier:
    y5373j5sbvzlzee6
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    miscarriage_stillbirth_overlap_sdr
    Status:
    Pending
    Job identifier:
    vrtklpss6yrjomq5
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    outcome_measures_validation_sdr_pc_hes
    Status:
    Pending
    Job identifier:
    noqu7s4wapuwxsti
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    pc_hes_decision_support_sdr
    Status:
    Pending
    Job identifier:
    gfqhyl576zhbt7q5
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    pc_hes_match_rates_icd_date_only_sdr
    Status:
    Pending
    Job identifier:
    kgeoca6mniyszvsc
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    pc_vs_pc_hes_comparison_sdr
    Status:
    Pending
    Job identifier:
    is5dsfcxgg6omkix
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    pc_vs_pc_hes_step2b_cluster_stream_summary
    Status:
    Pending
    Job identifier:
    gx5unfsnxjddqrin
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    sdr_step2b_row_fix_sensitivity_pc_hes
    Status:
    Pending
    Job identifier:
    ny6fyvp6xkd7kvje
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    algorithm_step_2b_cluster_start_analysis
    Status:
    Pending
    Job identifier:
    fmz6guwjmf5ev2vx
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    algorithm_step_2d
    Status:
    Pending
    Job identifier:
    ee7rbz2jgfh7hakv
    Status message:
    waiting_on_dependencies: Waiting on dependencies
  • Action:
    clean_episodes_chronic_conditions
    Status:
    Pending
    Job identifier:
    tx7yb4f4rhh3u26m
    Status message:
    waiting_on_dependencies: Waiting on dependencies

Pipeline

Show project.yaml
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Job statistics

Status Count Percentage
Pending 62 67.4%
Running 3 3.3%
Succeeded 27 29.3%
Failed 0 0%

27 / 92 (29.3%) complete

Timeline

  • Created:

  • Started:

  • Runtime: 21:49:32

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job request

Status
Running
Backend
TPP
Workspace
openpregnosis_longitudinal_main
Requested by
Paolo Mazzone
Branch
main
Force run dependencies
No
Git commit hash
80208a8
Requested actions
  • generate_diagnostic_event_counts
  • analyze_diagnostic_event_counts
  • generate_early_markers_data_2009_2013
  • generate_early_markers_data_2014_2018
  • generate_early_markers_data_2019_2026
  • generate_early_ga_numeric_markers_data_2009_2013
  • generate_early_ga_numeric_markers_data_2014_2018
  • generate_early_ga_numeric_markers_data_2019_2026
  • export_codelists_for_r
  • convert_lmp_episodes
  • convert_edd_episodes
  • convert_edc_episodes
  • convert_antenatal_ga_timed
  • convert_antenatal_ga_window
  • convert_birth_ga_timed
  • convert_birth_ga_window
  • convert_ga_numeric_fallback
  • algorithm_step_1
  • same_day_event_analysis
  • algorithm_step_2a
  • algorithm_step_2b
  • algorithm_step_2d
  • stillbirth_codelist_sensitivity
  • preterm_logic_validation_sdr
  • timing_event_cluster_range_sdr
  • pregnancy_finding_code_sdr
  • pregnancy_snomed_outcome_distance_sdr_pc_hes
  • numeric_value_profiling_sdr
  • dating_numeric_value_profiling_sdr
  • clean_episodes_maternal_age_imd_ethnicity
  • ethnicity_outcomes_by_category_sdr_pc_hes
  • demographics_outcomes_by_ethnicity_age_imd_sdr_pc_hes
  • analyse_chronic_conditions_pc_diagnostic
  • generate_asthma_pc_data_2009_2013
  • generate_asthma_pc_data_2014_2018
  • generate_asthma_pc_data_2019_2026
  • clean_episodes_chronic_conditions
  • chronic_conditions_prevalence_sdr_pc_hes
  • outcome_measures_validation_sdr_pc_hes
  • miscarriage_source_mix_by_year_sdr_pc_hes
  • early_loss_code_contribution_sdr_pc_hes
  • pc_vs_pc_hes_comparison_sdr
  • manuscript_tables_output_1
  • manuscript_table_10_inter_episode_gap_wide
  • manuscript_table_14_15_delivery_composition
  • sdr_delivery_plurality
  • sdr_delivery_plurality_term_order
  • pc_hes_decision_support_sdr
  • post_outcome_edd_recovery_impact_sdr
  • antenatal_preterm_pipeline_counts_sdr_pc_hes
  • miscarriage_stillbirth_overlap_sdr
  • algorithm_step_2e
  • algorithm_step_2b_comparison
  • algorithm_step_2b_impact_analysis
  • algorithm_step_2b_cluster_start_analysis
  • algorithm_step_2e_comparison
  • algorithm_step_3a
  • algorithm_step_3b
  • algorithm_step_3c
  • algorithm_step_3d
  • algorithm_step_4
  • algorithm_step_1_pc_hes
  • algorithm_step_2a_pc_hes
  • algorithm_step_2b_pc_hes
  • algorithm_step_2d_pc_hes
  • diagnostic_boundary_censor_pc_hes
  • algorithm_step_2e_pc_hes
  • algorithm_step_3a_pc_hes
  • algorithm_step_3b_pc_hes
  • algorithm_step_3c_pc_hes
  • algorithm_step_3d_pc_hes
  • algorithm_step_4_pc_hes
  • pc_vs_pc_hes_step4_outcome_comparison
  • pc_vs_pc_hes_step2b_cluster_stream_summary
  • pc_vs_pc_hes_step2d_start_source_summary
  • pc_vs_pc_hes_step2e_mode_preterm_by_cluster_source
  • pc_vs_pc_hes_step4_episode_outcome_stream_summary
  • pregnancy_algorithm_sdr_pc_hes
  • sdr_fetal_death_opcs_sensitivity_pc_hes
  • sdr_step2b_row_fix_sensitivity_pc_hes
  • sdr_admission_only_episode_count_pc_hes
  • sdr_miscarriage_delivery_context_counterfactual_pc_hes
  • sdr_weak_delivery_context_breakdown_pc_hes
  • sdr_episode_age_plausibility_pc_hes
  • sdr_step2b_age_sex_counterfactual_pc_hes
  • sdr_step2b_cluster_composition_pc_hes
  • sdr_admission_only_livebirth_drop_pc_hes
  • algorithm_step_4_comparison
  • pc_hes_match_rates_icd_date_only_sdr
  • compare_pc_hes_episodes
  • copy_2009_run_results
  • compare_2019_vs_2009_subset

Code comparison

Compare the code used in this job request