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Job request: 24733

Organisation:
Bennett Institute
Workspace:
openpathology-main
ID:
leirsv2dlg4m75lk
View repo View project.yaml

This page shows the technical details of what happened when the authorised researcher Jaidip Gill requested one or more actions to be run against real patient data within a secure environment.

By cross-referencing the list of jobs with the pipeline section below, you can infer what security level the outputs were written to.

The output security levels are:

  • highly_sensitive
    • Researchers can never directly view these outputs
    • Researchers can only request code is run against them
  • moderately_sensitive
    • Can be viewed by an approved researcher by logging into a highly secure environment
    • These are the only outputs that can be requested for public release via a controlled output review service.

Jobs

  • Action:
    generate_measures_vit_d_tests
    Status:
    Succeeded
    Job identifier:
    cfpxa73ejgxdkh74
  • Action:
    generate_measures_psa_ref_tests
    Status:
    Succeeded
    Job identifier:
    h6uu36g56ltmivnp
  • Action:
    generate_measures_hba1c_diab_tests
    Status:
    Succeeded
    Job identifier:
    tyvbdbwr7oflnjoh
  • Action:
    generate_measures_hba1c_diab_mean_tests
    Status:
    Failed
    Job identifier:
    2elxqtxlgvwgnssx
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    generate_measures_psa_tests
    Status:
    Succeeded
    Job identifier:
    wqxduxccdfjinccw
  • Action:
    generate_measures_vit_d_ref_tests
    Status:
    Succeeded
    Job identifier:
    7nllt3h2mluhe466
  • Action:
    generate_measures_alt_mtx_tests
    Status:
    Succeeded
    Job identifier:
    5bphaygdjkdgt6p4
  • Action:
    generate_processed_data_vit_d_ref_tests
    Status:
    Succeeded
    Job identifier:
    2guus7vz5636ocdz
  • Action:
    generate_measures_alt_mtx_ref_tests
    Status:
    Succeeded
    Job identifier:
    cr7xlfp7fw666a6i
  • Action:
    generate_processed_data_psa_tests
    Status:
    Succeeded
    Job identifier:
    6v7bj3qdkep4dd7v
  • Action:
    generate_processed_data_psa_ref_tests
    Status:
    Succeeded
    Job identifier:
    3hcpoi3vr3xtulqe
  • Action:
    generate_processed_data_vit_d_tests
    Status:
    Succeeded
    Job identifier:
    ehabwxjwz4il6i3f
  • Action:
    generate_processed_data_alt_mtx_tests
    Status:
    Succeeded
    Job identifier:
    3myfitm427piutbj
  • Action:
    generate_processed_data_alt_mtx_ref_tests
    Status:
    Succeeded
    Job identifier:
    mzdy2btywje4ujr3
  • Action:
    generate_processed_data_hba1c_diab_tests
    Status:
    Succeeded
    Job identifier:
    s7v7y5lklutm6leu
  • Action:
    generate_processed_data_hba1c_diab_mean_tests
    Status:
    Failed
    Job identifier:
    svhc25ypxzpjwt2l
    Error:
    dependency_failed: Not starting as dependency failed

Pipeline

Show project.yaml
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Timeline

  • Created:

  • Started:

  • Finished:

  • Runtime: 37:09:27

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job request

Status
Failed
Backend
TPP
Workspace
openpathology-main
Requested by
Jaidip Gill
Branch
main
Force run dependencies
No
Git commit hash
649f097
Requested actions
  • generate_measures_vit_d_tests
  • generate_processed_data_vit_d_tests
  • generate_measures_vit_d_ref_tests
  • generate_processed_data_vit_d_ref_tests
  • generate_measures_psa_tests
  • generate_processed_data_psa_tests
  • generate_measures_psa_ref_tests
  • generate_processed_data_psa_ref_tests
  • generate_measures_hba1c_diab_tests
  • generate_processed_data_hba1c_diab_tests
  • generate_measures_hba1c_diab_mean_tests
  • generate_processed_data_hba1c_diab_mean_tests
  • generate_measures_alt_mtx_tests
  • generate_processed_data_alt_mtx_tests
  • generate_measures_alt_mtx_ref_tests
  • generate_processed_data_alt_mtx_ref_tests

Code comparison

Compare the code used in this job request