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Job request: 24822

Organisation:
Bennett Institute
Workspace:
openpathology-main
ID:
x25g27on4ohmsz5s
View repo View project.yaml

This page shows the technical details of what happened when the authorised researcher Jaidip Gill requested one or more actions to be run against real patient data within a secure environment.

By cross-referencing the list of jobs with the pipeline section below, you can infer what security level the outputs were written to.

The output security levels are:

  • highly_sensitive
    • Researchers can never directly view these outputs
    • Researchers can only request code is run against them
  • moderately_sensitive
    • Can be viewed by an approved researcher by logging into a highly secure environment
    • These are the only outputs that can be requested for public release via a controlled output review service.

Jobs

  • Action:
    generate_processed_data_sodium_tests
    Status:
    Succeeded
    Job identifier:
    wzadmlzwy66yhqv7
  • Action:
    generate_measures_alt_mtx_ref_tests
    Status:
    Failed
    Job identifier:
    evqtzegrfngx2qrk
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    generate_processed_data_hba1c_numeric_tests
    Status:
    Succeeded
    Job identifier:
    2kjvucsieudkxpoe
  • Action:
    generate_processed_data_rbc_tests
    Status:
    Succeeded
    Job identifier:
    44sxsf4e5t22xfe6
  • Action:
    generate_processed_data_chol_tests
    Status:
    Succeeded
    Job identifier:
    ehsutf634xmg4wpy
  • Action:
    generate_processed_data_alt_tests
    Status:
    Succeeded
    Job identifier:
    b4oozjxpxolwb7f4
  • Action:
    generate_processed_data_systol_tests
    Status:
    Succeeded
    Job identifier:
    znbelcp6gazltnzd
  • Action:
    generate_measures_psa_ref_tests
    Status:
    Failed
    Job identifier:
    7rzoyxm46bv22a4q
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    generate_measures_vit_d_ref_tests
    Status:
    Failed
    Job identifier:
    gfjhgvver7klny7a
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    generate_processed_data_alt_mtx_ref_tests
    Status:
    Failed
    Job identifier:
    pqfzowbqsmqcd3er
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    generate_processed_data_vit_d_ref_tests
    Status:
    Failed
    Job identifier:
    aslpt2eijjwnav7u
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    generate_processed_data_psa_ref_tests
    Status:
    Failed
    Job identifier:
    rhdkfh3ajenh5oij
    Error:
    dependency_failed: Not starting as dependency failed

Pipeline

Show project.yaml
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Timeline

  • Created:

  • Started:

  • Finished:

  • Runtime: 56:06:01

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job request

Status
Failed
Backend
TPP
Workspace
openpathology-main
Requested by
Jaidip Gill
Branch
main
Force run dependencies
No
Git commit hash
0f133b9
Requested actions
  • generate_processed_data_alt_tests
  • generate_processed_data_chol_tests
  • generate_processed_data_hba1c_numeric_tests
  • generate_processed_data_rbc_tests
  • generate_processed_data_sodium_tests
  • generate_processed_data_systol_tests
  • generate_measures_vit_d_ref_tests
  • generate_processed_data_vit_d_ref_tests
  • generate_measures_psa_ref_tests
  • generate_processed_data_psa_ref_tests
  • generate_measures_alt_mtx_ref_tests
  • generate_processed_data_alt_mtx_ref_tests

Code comparison

Compare the code used in this job request