Skip to content

Job request: 4126

Organisation:
Bennett Institute
Workspace:
emis-smoke-tests
ID:
f3ece5gkfl7s4knv
View repo View project.yaml

This page shows the technical details of what happened when the authorised researcher Simon Davy requested one or more actions to be run against real patient data in the project, within a secure environment.

By cross-referencing the list of jobs with the pipeline section below, you can infer what security level various outputs were written to. Researchers can never directly view outputs marked as highly_sensitive ; they can only request that code runs against them. Outputs marked as moderately_sensitive can be viewed by an approved researcher by logging into a highly secure environment. Only outputs marked as moderately_sensitive can be requested for release to the public, via a controlled output review service.

Jobs

  • Action:
    run_model
    Status:
    Status: Succeeded
    Job identifier:
    jpabufwrlx4scbsa

Pipeline

Show project.yaml 
version: '3.0'

expectations:
  population_size: 1000

actions:

  generate_study_population:
    run: cohortextractor:latest generate_cohort --study-definition study_definition
    outputs:
      highly_sensitive:
        cohort: output/input.csv

  run_model:
    run: python:latest python analysis/count_occurrences.py
    needs: [generate_study_population]
    outputs:
      moderately_sensitive:
        log: output/counts.json

Timeline

  • Created:

  • Started:

  • Finished:

  • Runtime: 00:01:47

These timestamps are generated and stored using the UTC timezone on the EMIS backend.

Job information

Status
Succeeded
Backend
EMIS
Workspace
emis-smoke-tests
Requested by
Simon Davy
Branch
master
Force run dependencies
No
Git commit hash
5e2fa0f
Requested actions
  • run_model

Code comparison

Compare the code used in this Job Request