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Job request: 24306

Organisation:
Bennett Institute
Workspace:
tpp-database-import-dates
ID:
ddocb62zn4ykv2r4
View repo View project.yaml

This page shows the technical details of what happened when the authorised researcher Peter Inglesby requested one or more actions to be run against real patient data within a secure environment.

By cross-referencing the list of jobs with the pipeline section below, you can infer what security level the outputs were written to.

The output security levels are:

  • highly_sensitive
    • Researchers can never directly view these outputs
    • Researchers can only request code is run against them
  • moderately_sensitive
    • Can be viewed by an approved researcher by logging into a highly secure environment
    • These are the only outputs that can be requested for public release via a controlled output review service.

Jobs

  • Action:
    query
    Status:
    Status: Succeeded
    Job identifier:
    znfcoazb3gkhpjre
  • Action:
    latest_import_dates
    Status:
    Status: Succeeded
    Job identifier:
    nvr2kcqarsapcpt2
  • Action:
    plot
    Status:
    Status: Succeeded
    Job identifier:
    hke7b5yyf72syyco
  • Action:
    render_report
    Status:
    Status: Succeeded
    Job identifier:
    l6ttqzb47ozjppii

Pipeline

Show project.yaml 
version: "3.0"

expectations:
  population_size: 1000

actions:
  query:
    run: >
      sqlrunner:latest
        --dummy-data-file analysis/dummy_rows.csv.gz
        --output output/query/rows.csv.gz
        --log-file output/query/log.json
        analysis/query.sql
    outputs:
      highly_sensitive:
        rows: output/query/rows.csv.gz
      moderately_sensitive:
        log: output/query/log.json

  latest_import_dates:
    needs: [query]
    run: python:latest python -m analysis.latest_import_dates
    outputs:
      moderately_sensitive:
        latest_import_dates: output/latest_import_dates/latest_import_dates.csv

  plot:
    needs: [query]
    run: python:latest python -m analysis.plot
    outputs:
      moderately_sensitive:
        latest_import_dates: output/plot/plot.png

  render_report:
    needs: [query, latest_import_dates, plot]
    run: python:latest python -m analysis.render_report
    outputs:
      moderately_sensitive:
        report: output/render_report/report.html

Timeline

  • Created:

  • Started:

  • Finished:

  • Runtime: 00:00:53

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job request

Status
Succeeded
Backend
TPP
Workspace
tpp-database-import-dates
Requested by
Peter Inglesby
Branch
main
Force run dependencies
Yes
Git commit hash
c636c92
Requested actions
  • run_all

Code comparison

Compare the code used in this job request