Job request: 20897
- Organisation:
- Bennett Institute
- Workspace:
- tpp-database-schema
- ID:
- ncfgluznrluml6hq
This page shows the technical details of what happened when the authorised researcher Iain Dillingham requested one or more actions to be run against real patient data within a secure environment.
By cross-referencing the list of jobs with the pipeline section below, you can infer what security level the outputs were written to.
The output security levels are:
-
highly_sensitive
- Researchers can never directly view these outputs
- Researchers can only request code is run against them
-
moderately_sensitive
- Can be viewed by an approved researcher by logging into a highly secure environment
- These are the only outputs that can be requested for public release via a controlled output review service.
Jobs
-
- Job identifier:
-
nzrkobjo3qychn5j - Error:
- nonzero_exit: Job exited with an error
-
- Job identifier:
-
ek5aczbd6aaslaub - Error:
- dependency_failed: Not starting as dependency failed
Pipeline
Show project.yaml
version: "3.0"
expectations:
population_size: 1000
actions:
query:
run: >
sqlrunner:latest
--output output/rows.csv
--dummy-data-file analysis/dummy_rows.csv
--log-file output/log.json
analysis/query.sql
outputs:
moderately_sensitive:
rows: output/rows.csv
log: output/log.json
make-html-reports:
# --execute
# execute notebooks before converting them to HTML reports
# --no-input
# exclude input cells and output prompts from HTML reports
# --to=html
# convert notebooks to HTML reports (not e.g. to PDF reports)
# --template basic
# use the basic (unstyled) template for HTML reports
# --output-dir=output
# write HTML reports to the `output` directory
run: >
python:latest jupyter nbconvert
--execute
--no-input
--to=html
--template basic
--output-dir=output
analysis/*.ipynb
needs:
- query
outputs:
moderately_sensitive:
reports: output/*.html
Timeline
-
Created:
-
Started:
-
Finished:
-
Runtime: 00:00:07
These timestamps are generated and stored using the UTC timezone on the TPP backend.
Job request
- Status
-
Failed
- Backend
- TPP
- Workspace
- tpp-database-schema
- Requested by
- Iain Dillingham
- Branch
- main
- Force run dependencies
- Yes
- Git commit hash
- 521c975
- Requested actions
-
-
run_all
-
Code comparison
Compare the code used in this job request