Job request: 23593
- Organisation:
- Bennett Institute
- Workspace:
- tpp-database-schema
- ID:
- udqmom354xnowpfl
This page shows the technical details of what happened when the authorised researcher Becky Smith requested one or more actions to be run against the OpenSAFELY test environment.
None of the code was run against real patient data.
Jobs
-
- Job identifier:
-
xha5u6bni2fmfoiw - Error:
- internal_error: Internal error: this usually means a platform issue rather than a problem for users to fix. The tech team are automatically notified of these errors and will be investigating.
-
- Job identifier:
-
jq5dhpxmjt4xnwr5 - Error:
- internal_error: Internal error: this usually means a platform issue rather than a problem for users to fix. The tech team are automatically notified of these errors and will be investigating.
-
- Job identifier:
-
zqq6h6mkroaojxyc - Error:
- dependency_failed: Not starting as dependency failed
Pipeline
Show project.yaml
version: "3.0"
expectations:
population_size: 1000
actions:
query:
run: >
sqlrunner:latest
--output output/rows.csv
--log-file output/log.json
analysis/query.sql
outputs:
moderately_sensitive:
rows: output/rows.csv
log: output/log.json
data_dictionary_query:
run: >
sqlrunner:latest
--output output/data_dictionary.csv
--log-file output/data_dictionary_log.json
analysis/data_dictionary_query.sql
outputs:
moderately_sensitive:
rows: output/data_dictionary.csv
log: output/data_dictionary_log.json
make-html-reports:
# --execute
# execute notebooks before converting them to HTML reports
# --no-input
# exclude input cells and output prompts from HTML reports
# --to=html
# convert notebooks to HTML reports (not e.g. to PDF reports)
# --template basic
# use the basic (unstyled) template for HTML reports
# --output-dir=output
# write HTML reports to the `output` directory
run: >
python:latest jupyter nbconvert
--execute
--no-input
--to=html
--template basic
--output-dir=output
analysis/*.ipynb
needs:
- query
outputs:
moderately_sensitive:
reports: output/*.html
Timeline
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Created:
-
Started:
-
Finished:
-
Runtime:
These timestamps are generated and stored using the UTC timezone on the TEST backend.
Job request
- Status
-
Failed
- Backend
- Test
- Workspace
- tpp-database-schema
- Requested by
- Becky Smith
- Branch
- main
- Force run dependencies
- No
- Git commit hash
- a2d0972
- Requested actions
-
-
run_all
-
Code comparison
Compare the code used in this job request
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