Skip to content

Job request: 23281

Organisation:
The London School of Hygiene & Tropical Medicine
Workspace:
covid_risk_immunocompromised
ID:
poztek3qwo362qsa
View repo View project.yaml

This page shows the technical details of what happened when the authorised researcher Ed Parker requested one or more actions to be run against real patient data within a secure environment.

By cross-referencing the list of jobs with the pipeline section below, you can infer what security level the outputs were written to.

The output security levels are:

  • highly_sensitive
    • Researchers can never directly view these outputs
    • Researchers can only request code is run against them
  • moderately_sensitive
    • Can be viewed by an approved researcher by logging into a highly secure environment
    • These are the only outputs that can be requested for public release via a controlled output review service.

Jobs

  • Action:
    process_data_wavejn1
    Status:
    Status: Succeeded
    Job identifier:
    5s4ekqpfvj5bhvel
  • Action:
    filter_data_wavejn1
    Status:
    Status: Succeeded
    Job identifier:
    652bltzbfaoeztek
  • Action:
    skim_data_wavejn1
    Status:
    Status: Succeeded
    Job identifier:
    ounctgzwhy4phwtj
  • Action:
    calc_ir_hr_wavejn1_HC
    Status:
    Status: Failed
    Job identifier:
    jlyzh3c2lo47jqi6
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    calc_ir_hr_wavejn1_IMD
    Status:
    Status: Failed
    Job identifier:
    s5gom724rwudhchd
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    calc_ir_hr_wavejn1_IMM
    Status:
    Status: Failed
    Job identifier:
    zn3kdsoqtry6rdmj
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    calc_ir_hr_wavejn1_RC
    Status:
    Status: Failed
    Job identifier:
    nmm7vjqa7bg45acz
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    calc_ir_hr_wavejn1_Tx
    Status:
    Status: Failed
    Job identifier:
    m3vfgfcq7cmeygcx
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    imm_comb_wavejn1
    Status:
    Status: Succeeded
    Job identifier:
    ex35l4nzmmktljzn
  • Action:
    table_1_wavejn1_HC
    Status:
    Status: Failed
    Job identifier:
    jqr7ido2bsbbvigq
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    table_1_wavejn1_IMD
    Status:
    Status: Failed
    Job identifier:
    4xtfkustthoihb4n
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    table_1_wavejn1_IMM
    Status:
    Status: Failed
    Job identifier:
    ogj5vxufaf7ptuaf
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    table_1_wavejn1_RC
    Status:
    Status: Failed
    Job identifier:
    plx2mqscnvudiwjq
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    table_1_wavejn1_Tx
    Status:
    Status: Failed
    Job identifier:
    hzjqujo2h3bhegca
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    table_1_wavejn1_all
    Status:
    Status: Failed
    Job identifier:
    4sfpz4exf7oswzsa
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    collate_table_1_wavejn1
    Status:
    Status: Failed
    Job identifier:
    phbdyfepzyb3i2pa
    Error:
    dependency_failed: Not starting as dependency failed

Pipeline

Show project.yaml
This file is too large to render, try viewing it on GitHub .

Timeline

  • Created:

  • Started:

  • Finished:

  • Runtime: 00:30:37

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job request

Status
Failed
Backend
TPP
Workspace
covid_risk_immunocompromised
Requested by
Ed Parker
Branch
main
Force run dependencies
No
Git commit hash
7817540
Requested actions
  • process_data_wavejn1
  • skim_data_wavejn1
  • filter_data_wavejn1
  • imm_comb_wavejn1
  • table_1_wavejn1_all
  • table_1_wavejn1_Tx
  • table_1_wavejn1_HC
  • table_1_wavejn1_RC
  • table_1_wavejn1_IMM
  • table_1_wavejn1_IMD
  • collate_table_1_wavejn1
  • calc_ir_hr_wavejn1_Tx
  • calc_ir_hr_wavejn1_HC
  • calc_ir_hr_wavejn1_RC
  • calc_ir_hr_wavejn1_IMM
  • calc_ir_hr_wavejn1_IMD

Code comparison

Compare the code used in this job request