Job request: 2397
- Organisation:
- The London School of Hygiene & Tropical Medicine
- Workspace:
- sgtf-617-research
- ID:
- svttocukupous4nj
This page shows the technical details of what happened when the authorised researcher Daniel Grint requested one or more actions to be run against real patient data within a secure environment.
By cross-referencing the list of jobs with the pipeline section below, you can infer what security level the outputs were written to.
The output security levels are:
-
highly_sensitive
- Researchers can never directly view these outputs
- Researchers can only request code is run against them
-
moderately_sensitive
- Can be viewed by an approved researcher by logging into a highly secure environment
- These are the only outputs that can be requested for public release via a controlled output review service.
Pipeline
Show project.yaml
version: '3.0'
expectations:
population_size: 50000
actions:
generate_cohort:
run: cohortextractor:latest generate_cohort --study-definition study_definition
outputs:
highly_sensitive:
cohort: output/input.csv
crMAIN:
run: stata-mp:latest analysis/cr_analysis_dataset.do
needs: [generate_cohort]
outputs:
moderately_sensitive:
log: logs/cr_analysis_dataset.log
highly_sensitive:
data: output/cr_analysis_dataset.dta
anTAB1:
run: stata-mp:latest analysis/an_table1.do
needs: [crMAIN]
outputs:
moderately_sensitive:
log: logs/an_table1.log
table1text: output/table1.txt
table1xlsx: output/table1.xlsx
figure1: output/ae_hist.svg
figure2: output/ae_kden.svg
Timeline
-
Created:
-
Started:
-
Finished:
-
Runtime: 00:01:01
These timestamps are generated and stored using the UTC timezone on the TPP backend.
Job request
- Status
-
Succeeded
- Backend
- TPP
- Workspace
- sgtf-617-research
- Requested by
- Daniel Grint
- Branch
- master
- Force run dependencies
- No
- Git commit hash
- 54cec26
- Requested actions
-
-
crMAIN -
anTAB1
-
Code comparison
Compare the code used in this job request