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Job request: 24645

Organisation:
Bennett Institute
Workspace:
pifu-data-exploration
ID:
avnw4iulc2h5npul
View repo View project.yaml

This page shows the technical details of what happened when the authorised researcher Andrea Schaffer requested one or more actions to be run against real patient data within a secure environment.

By cross-referencing the list of jobs with the pipeline section below, you can infer what security level the outputs were written to.

The output security levels are:

  • highly_sensitive
    • Researchers can never directly view these outputs
    • Researchers can only request code is run against them
  • moderately_sensitive
    • Can be viewed by an approved researcher by logging into a highly secure environment
    • These are the only outputs that can be requested for public release via a controlled output review service.

Jobs

  • Action:
    measures
    Status:
    Status: Failed
    Job identifier:
    reczlp7os24tj6kn
    Error:
    cancelled_by_user: Cancelled by user

Pipeline

Show project.yaml 
version: '4.0'

actions:
  generate_dataset:
    run: ehrql:v1 generate-dataset analysis/dataset_definition.py --output output/dataset.csv.gz
    outputs:
      highly_sensitive:
        dataset: output/dataset.csv.gz

  measures:
    run: ehrql:v1 generate-measures analysis/measures.py --output output/measures/measures.csv
    outputs:
      moderately_sensitive:
        dataset: output/measures/measures.csv

  table:
    run: r:latest analysis/process/pop_characteristics.R
    needs: [generate_dataset]
    outputs:
      moderately_sensitive:
        table: output/dataset/table.csv

Timeline

  • Created:

  • Finished:

  • Runtime:

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job request

Status
Failed
Backend
TPP
Workspace
pifu-data-exploration
Requested by
Andrea Schaffer
Branch
main
Force run dependencies
No
Git commit hash
bafb802
Requested actions
  • measures

Code comparison

Compare the code used in this job request