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Job request: 7678

Organisation:
University of Nottingham
Workspace:
tncc_ve
ID:
gprghopup7aec3ua
View repo View project.yaml

This page shows the technical details of what happened when the authorised researcher Louise Lansbury requested one or more actions to be run against real patient data within a secure environment.

By cross-referencing the list of jobs with the pipeline section below, you can infer what security level the outputs were written to.

The output security levels are:

  • highly_sensitive
    • Researchers can never directly view these outputs
    • Researchers can only request code is run against them
  • moderately_sensitive
    • Can be viewed by an approved researcher by logging into a highly secure environment
    • These are the only outputs that can be requested for public release via a controlled output review service.

Jobs

  • Action:
    generate_study_population
    Status:
    Status: Succeeded
    Job identifier:
    rildewpnwhphmfii
  • Action:
    run_model
    Status:
    Status: Failed
    Job identifier:
    k6ug6zrtd3k76pd2
    Error:
    nonzero_exit: Job exited with error code 1

Pipeline

Show project.yaml 
version: '3.0'

expectations:
  population_size: 10000

actions:

  generate_study_population:
    run: cohortextractor:latest generate_cohort --study-definition study_definition
    outputs:
      highly_sensitive:
        cohort: output/input.csv

  run_model:
    run: stata-mp:latest analysis/00a_cr_create_analysis_dataset.do
    needs: [generate_study_population]
    outputs:
      moderately_sensitive:
        log: logs/00a_cr_create_analysis_dataset.txt

Timeline

  • Created:

  • Started:

  • Finished:

  • Runtime: 13:45:04

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job request

Status
Failed
Backend
TPP
Workspace
tncc_ve
Requested by
Louise Lansbury
Branch
main
Force run dependencies
No
Git commit hash
770e3a4
Requested actions
  • generate_study_population
  • run_model

Code comparison

Compare the code used in this job request