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covid-ve-change-over-time-main

Below are the logs for each job run in the covid-ve-change-over-time-main workspace of the project 22 - Investigating the effectiveness of the COVID-19 vaccination programme in the UK. They are grouped based on the actions which were requested.

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Failed
covid-ve-change-over-time-main TPP 2/58 data_eligible_ab, data_2nd_vax_dates, plot_2nd_vax_dates, data_eligible_cde, dummy_data_tests, generate_covid_tests_data, process_tests, plot_cumulative_incidence, table1, data_comparisons_process, data_tte_process_BNT162b2, data_tte_process_ChAdOx, data_tte_process_both, process_event_count_tables, preflight_BNT162b2_1_anytest, apply_model_cox_BNT162b2_1_anytest, preflight_BNT162b2_1_postest, apply_model_cox_BNT162b2_1_postest, preflight_BNT162b2_1_covidadmitted, apply_model_cox_BNT162b2_1_covidadmitted, preflight_BNT162b2_1_coviddeath, apply_model_cox_BNT162b2_1_coviddeath, preflight_BNT162b2_1_noncoviddeath, apply_model_cox_BNT162b2_1_noncoviddeath, tables_model_cox_BNT162b2_1, preflight_BNT162b2_2_anytest, apply_model_cox_BNT162b2_2_anytest, preflight_BNT162b2_2_postest, apply_model_cox_BNT162b2_2_postest, preflight_BNT162b2_2_covidadmitted, apply_model_cox_BNT162b2_2_covidadmitted, preflight_BNT162b2_2_coviddeath, apply_model_cox_BNT162b2_2_coviddeath, preflight_BNT162b2_2_noncoviddeath, apply_model_cox_BNT162b2_2_noncoviddeath, tables_model_cox_BNT162b2_2, preflight_BNT162b2_3_anytest, apply_model_cox_BNT162b2_3_anytest, preflight_BNT162b2_3_postest, apply_model_cox_BNT162b2_3_postest, preflight_BNT162b2_3_covidadmitted, apply_model_cox_BNT162b2_3_covidadmitted, preflight_BNT162b2_3_coviddeath, apply_model_cox_BNT162b2_3_coviddeath, preflight_BNT162b2_3_noncoviddeath, apply_model_cox_BNT162b2_3_noncoviddeath, tables_model_cox_BNT162b2_3, preflight_BNT162b2_4_anytest, apply_model_cox_BNT162b2_4_anytest, preflight_BNT162b2_4_postest, apply_model_cox_BNT162b2_4_postest, preflight_BNT162b2_4_covidadmitted, apply_model_cox_BNT162b2_4_covidadmitted, preflight_BNT162b2_4_coviddeath, apply_model_cox_BNT162b2_4_coviddeath, preflight_BNT162b2_4_noncoviddeath, apply_model_cox_BNT162b2_4_noncoviddeath, tables_model_cox_BNT162b2_4
Succeeded
covid-ve-change-over-time-main TPP 1/1 combine_estimates
Succeeded
covid-ve-change-over-time-main TPP 1/1 plot_hr_all
Succeeded
covid-ve-change-over-time-main TPP 38/38 preflight_both_1_anytest, apply_model_cox_both_1_anytest, preflight_both_1_postest, apply_model_cox_both_1_postest, preflight_both_1_covidadmitted, apply_model_cox_both_1_covidadmitted, preflight_both_1_coviddeath, apply_model_cox_both_1_coviddeath, preflight_both_1_noncoviddeath, apply_model_cox_both_1_noncoviddeath, tables_model_cox_both_1, preflight_both_3_anytest, apply_model_cox_both_3_anytest, preflight_both_3_postest, apply_model_cox_both_3_postest, preflight_both_3_covidadmitted, apply_model_cox_both_3_covidadmitted, preflight_both_3_coviddeath, apply_model_cox_both_3_coviddeath, preflight_both_3_noncoviddeath, apply_model_cox_both_3_noncoviddeath, tables_model_cox_both_3, preflight_both_4_anytest, apply_model_cox_both_4_anytest, preflight_both_4_postest, apply_model_cox_both_4_postest, preflight_both_4_covidadmitted, apply_model_cox_both_4_covidadmitted, preflight_both_4_coviddeath, apply_model_cox_both_4_coviddeath, preflight_both_4_noncoviddeath, apply_model_cox_both_4_noncoviddeath, tables_model_cox_both_4, plot_hr_anytest_BNT162b2andChAdOx, plot_hr_BNT162b2andChAdOx, plot_hr_anytest_BNT162b2vsChAdOx, plot_hr_BNT162b2vsChAdOx, plot_coefs_both
Succeeded
covid-ve-change-over-time-main TPP 3/3 tables_model_cox_BNT162b2_3, plot_hr_BNT162b2, plot_coefs_BNT162b2
Succeeded
covid-ve-change-over-time-main TPP 38/38 preflight_BNT162b2_3_coviddeath, apply_model_cox_BNT162b2_3_coviddeath, preflight_ChAdOx_1_anytest, apply_model_cox_ChAdOx_1_anytest, preflight_ChAdOx_1_postest, apply_model_cox_ChAdOx_1_postest, preflight_ChAdOx_1_covidadmitted, apply_model_cox_ChAdOx_1_covidadmitted, preflight_ChAdOx_1_coviddeath, apply_model_cox_ChAdOx_1_coviddeath, preflight_ChAdOx_1_noncoviddeath, apply_model_cox_ChAdOx_1_noncoviddeath, tables_model_cox_ChAdOx_1, preflight_ChAdOx_3_anytest, apply_model_cox_ChAdOx_3_anytest, preflight_ChAdOx_3_postest, apply_model_cox_ChAdOx_3_postest, preflight_ChAdOx_3_covidadmitted, apply_model_cox_ChAdOx_3_covidadmitted, preflight_ChAdOx_3_coviddeath, apply_model_cox_ChAdOx_3_coviddeath, preflight_ChAdOx_3_noncoviddeath, apply_model_cox_ChAdOx_3_noncoviddeath, tables_model_cox_ChAdOx_3, preflight_ChAdOx_4_anytest, apply_model_cox_ChAdOx_4_anytest, preflight_ChAdOx_4_postest, apply_model_cox_ChAdOx_4_postest, preflight_ChAdOx_4_covidadmitted, apply_model_cox_ChAdOx_4_covidadmitted, preflight_ChAdOx_4_coviddeath, apply_model_cox_ChAdOx_4_coviddeath, preflight_ChAdOx_4_noncoviddeath, apply_model_cox_ChAdOx_4_noncoviddeath, tables_model_cox_ChAdOx_4, plot_hr_anytest_ChAdOx, plot_hr_ChAdOx, plot_coefs_ChAdOx
Failed
covid-ve-change-over-time-main TPP 42/47 preflight_BNT162b2_1_anytest, apply_model_cox_BNT162b2_1_anytest, preflight_BNT162b2_1_postest, apply_model_cox_BNT162b2_1_postest, preflight_BNT162b2_1_covidadmitted, apply_model_cox_BNT162b2_1_covidadmitted, preflight_BNT162b2_1_coviddeath, apply_model_cox_BNT162b2_1_coviddeath, preflight_BNT162b2_1_noncoviddeath, apply_model_cox_BNT162b2_1_noncoviddeath, tables_model_cox_BNT162b2_1, preflight_BNT162b2_2_anytest, apply_model_cox_BNT162b2_2_anytest, preflight_BNT162b2_2_postest, apply_model_cox_BNT162b2_2_postest, preflight_BNT162b2_2_covidadmitted, apply_model_cox_BNT162b2_2_covidadmitted, preflight_BNT162b2_2_coviddeath, apply_model_cox_BNT162b2_2_coviddeath, preflight_BNT162b2_2_noncoviddeath, apply_model_cox_BNT162b2_2_noncoviddeath, tables_model_cox_BNT162b2_2, preflight_BNT162b2_3_anytest, apply_model_cox_BNT162b2_3_anytest, preflight_BNT162b2_3_postest, apply_model_cox_BNT162b2_3_postest, preflight_BNT162b2_3_covidadmitted, apply_model_cox_BNT162b2_3_covidadmitted, preflight_BNT162b2_3_coviddeath, apply_model_cox_BNT162b2_3_coviddeath, preflight_BNT162b2_3_noncoviddeath, apply_model_cox_BNT162b2_3_noncoviddeath, tables_model_cox_BNT162b2_3, preflight_BNT162b2_4_anytest, apply_model_cox_BNT162b2_4_anytest, preflight_BNT162b2_4_postest, apply_model_cox_BNT162b2_4_postest, preflight_BNT162b2_4_covidadmitted, apply_model_cox_BNT162b2_4_covidadmitted, preflight_BNT162b2_4_coviddeath, apply_model_cox_BNT162b2_4_coviddeath, preflight_BNT162b2_4_noncoviddeath, apply_model_cox_BNT162b2_4_noncoviddeath, tables_model_cox_BNT162b2_4, plot_hr_anytest_BNT162b2, plot_hr_BNT162b2, plot_coefs_BNT162b2
Succeeded
covid-ve-change-over-time-main TPP 5/5 preflight_ChAdOx_3_noncoviddeath, apply_model_cox_ChAdOx_3_noncoviddeath, tables_model_cox_ChAdOx_3, plot_hr_ChAdOx, plot_coefs_ChAdOx
Succeeded
covid-ve-change-over-time-main TPP 3/3 apply_model_cox_ChAdOx_3_noncoviddeath, plot_hr_ChAdOx, plot_coefs_ChAdOx
Succeeded
covid-ve-change-over-time-main TPP 36/36 preflight_ChAdOx_1_anytest, apply_model_cox_ChAdOx_1_anytest, preflight_ChAdOx_1_postest, apply_model_cox_ChAdOx_1_postest, preflight_ChAdOx_1_covidadmitted, apply_model_cox_ChAdOx_1_covidadmitted, preflight_ChAdOx_1_coviddeath, apply_model_cox_ChAdOx_1_coviddeath, preflight_ChAdOx_1_noncoviddeath, apply_model_cox_ChAdOx_1_noncoviddeath, tables_model_cox_ChAdOx_1, preflight_ChAdOx_3_anytest, apply_model_cox_ChAdOx_3_anytest, preflight_ChAdOx_3_postest, apply_model_cox_ChAdOx_3_postest, preflight_ChAdOx_3_covidadmitted, apply_model_cox_ChAdOx_3_covidadmitted, preflight_ChAdOx_3_coviddeath, apply_model_cox_ChAdOx_3_coviddeath, preflight_ChAdOx_3_noncoviddeath, apply_model_cox_ChAdOx_3_noncoviddeath, tables_model_cox_ChAdOx_3, preflight_ChAdOx_4_anytest, apply_model_cox_ChAdOx_4_anytest, preflight_ChAdOx_4_postest, apply_model_cox_ChAdOx_4_postest, preflight_ChAdOx_4_covidadmitted, apply_model_cox_ChAdOx_4_covidadmitted, preflight_ChAdOx_4_coviddeath, apply_model_cox_ChAdOx_4_coviddeath, preflight_ChAdOx_4_noncoviddeath, apply_model_cox_ChAdOx_4_noncoviddeath, tables_model_cox_ChAdOx_4, plot_hr_anytest_ChAdOx, plot_hr_ChAdOx, plot_coefs_ChAdOx
Succeeded
covid-ve-change-over-time-main TPP 1/1 plot_coefs_BNT162b2
Succeeded
covid-ve-change-over-time-main TPP 2/2 plot_hr_anytest_BNT162b2, plot_hr_BNT162b2
Succeeded
covid-ve-change-over-time-main TPP 49/49 data_comparisons_process, data_tte_process_BNT162b2, data_tte_process_ChAdOx, data_tte_process_both, process_event_count_tables, preflight_BNT162b2_1_anytest, apply_model_cox_BNT162b2_1_anytest, preflight_BNT162b2_1_postest, apply_model_cox_BNT162b2_1_postest, preflight_BNT162b2_1_covidadmitted, apply_model_cox_BNT162b2_1_covidadmitted, preflight_BNT162b2_1_coviddeath, apply_model_cox_BNT162b2_1_coviddeath, preflight_BNT162b2_1_noncoviddeath, apply_model_cox_BNT162b2_1_noncoviddeath, tables_model_cox_BNT162b2_1, preflight_BNT162b2_2_anytest, apply_model_cox_BNT162b2_2_anytest, preflight_BNT162b2_2_postest, apply_model_cox_BNT162b2_2_postest, preflight_BNT162b2_2_covidadmitted, apply_model_cox_BNT162b2_2_covidadmitted, preflight_BNT162b2_2_coviddeath, apply_model_cox_BNT162b2_2_coviddeath, preflight_BNT162b2_2_noncoviddeath, apply_model_cox_BNT162b2_2_noncoviddeath, tables_model_cox_BNT162b2_2, preflight_BNT162b2_3_anytest, apply_model_cox_BNT162b2_3_anytest, preflight_BNT162b2_3_postest, apply_model_cox_BNT162b2_3_postest, preflight_BNT162b2_3_covidadmitted, apply_model_cox_BNT162b2_3_covidadmitted, preflight_BNT162b2_3_coviddeath, apply_model_cox_BNT162b2_3_coviddeath, preflight_BNT162b2_3_noncoviddeath, apply_model_cox_BNT162b2_3_noncoviddeath, tables_model_cox_BNT162b2_3, preflight_BNT162b2_4_anytest, apply_model_cox_BNT162b2_4_anytest, preflight_BNT162b2_4_postest, apply_model_cox_BNT162b2_4_postest, preflight_BNT162b2_4_covidadmitted, apply_model_cox_BNT162b2_4_covidadmitted, preflight_BNT162b2_4_coviddeath, apply_model_cox_BNT162b2_4_coviddeath, preflight_BNT162b2_4_noncoviddeath, apply_model_cox_BNT162b2_4_noncoviddeath, tables_model_cox_BNT162b2_4
Succeeded
covid-ve-change-over-time-main TPP 7/7 plot_hr_anytest_BNT162b2, plot_hr_anytest_ChAdOx, plot_hr_anytest_BNT162b2andChAdOx, plot_hr_anytest_BNT162b2vsChAdOx, plot_coefs_BNT162b2, plot_coefs_ChAdOx, plot_coefs_both
Succeeded
covid-ve-change-over-time-main TPP 40/40 preflight_BNT162b2_3_anytest, apply_model_cox_BNT162b2_3_anytest, preflight_BNT162b2_3_postest, apply_model_cox_BNT162b2_3_postest, preflight_BNT162b2_3_covidadmitted, apply_model_cox_BNT162b2_3_covidadmitted, preflight_BNT162b2_3_coviddeath, apply_model_cox_BNT162b2_3_coviddeath, preflight_BNT162b2_3_noncoviddeath, apply_model_cox_BNT162b2_3_noncoviddeath, tables_model_cox_BNT162b2_3, preflight_ChAdOx_3_anytest, apply_model_cox_ChAdOx_3_anytest, preflight_ChAdOx_3_postest, apply_model_cox_ChAdOx_3_postest, preflight_ChAdOx_3_covidadmitted, apply_model_cox_ChAdOx_3_covidadmitted, preflight_ChAdOx_3_coviddeath, apply_model_cox_ChAdOx_3_coviddeath, preflight_ChAdOx_3_noncoviddeath, apply_model_cox_ChAdOx_3_noncoviddeath, tables_model_cox_ChAdOx_3, preflight_both_3_anytest, apply_model_cox_both_3_anytest, preflight_both_3_postest, apply_model_cox_both_3_postest, preflight_both_3_covidadmitted, apply_model_cox_both_3_covidadmitted, preflight_both_3_coviddeath, apply_model_cox_both_3_coviddeath, preflight_both_3_noncoviddeath, apply_model_cox_both_3_noncoviddeath, tables_model_cox_both_3, plot_hr_BNT162b2, plot_hr_ChAdOx, plot_hr_BNT162b2andChAdOx, plot_hr_BNT162b2vsChAdOx, plot_coefs_BNT162b2, plot_coefs_ChAdOx, plot_coefs_both
Succeeded
covid-ve-change-over-time-main TPP 41/41 preflight_both_1_anytest, apply_model_cox_both_1_anytest, preflight_both_1_postest, apply_model_cox_both_1_postest, preflight_both_1_covidadmitted, apply_model_cox_both_1_covidadmitted, preflight_both_1_coviddeath, apply_model_cox_both_1_coviddeath, preflight_both_1_noncoviddeath, apply_model_cox_both_1_noncoviddeath, tables_model_cox_both_1, preflight_both_3_anytest, apply_model_cox_both_3_anytest, preflight_both_3_postest, apply_model_cox_both_3_postest, preflight_both_3_covidadmitted, apply_model_cox_both_3_covidadmitted, preflight_both_3_coviddeath, apply_model_cox_both_3_coviddeath, preflight_both_3_noncoviddeath, apply_model_cox_both_3_noncoviddeath, tables_model_cox_both_3, preflight_both_4_anytest, apply_model_cox_both_4_anytest, preflight_both_4_postest, apply_model_cox_both_4_postest, preflight_both_4_covidadmitted, apply_model_cox_both_4_covidadmitted, preflight_both_4_coviddeath, apply_model_cox_both_4_coviddeath, preflight_both_4_noncoviddeath, apply_model_cox_both_4_noncoviddeath, tables_model_cox_both_4, plot_hr_anytest_BNT162b2, plot_hr_BNT162b2, plot_hr_anytest_ChAdOx, plot_hr_ChAdOx, plot_hr_anytest_BNT162b2andChAdOx, plot_hr_BNT162b2andChAdOx, plot_hr_anytest_BNT162b2vsChAdOx, plot_hr_BNT162b2vsChAdOx
Succeeded
covid-ve-change-over-time-main TPP 33/33 preflight_ChAdOx_1_anytest, apply_model_cox_ChAdOx_1_anytest, preflight_ChAdOx_1_postest, apply_model_cox_ChAdOx_1_postest, preflight_ChAdOx_1_covidadmitted, apply_model_cox_ChAdOx_1_covidadmitted, preflight_ChAdOx_1_coviddeath, apply_model_cox_ChAdOx_1_coviddeath, preflight_ChAdOx_1_noncoviddeath, apply_model_cox_ChAdOx_1_noncoviddeath, tables_model_cox_ChAdOx_1, preflight_ChAdOx_3_anytest, apply_model_cox_ChAdOx_3_anytest, preflight_ChAdOx_3_postest, apply_model_cox_ChAdOx_3_postest, preflight_ChAdOx_3_covidadmitted, apply_model_cox_ChAdOx_3_covidadmitted, preflight_ChAdOx_3_coviddeath, apply_model_cox_ChAdOx_3_coviddeath, preflight_ChAdOx_3_noncoviddeath, apply_model_cox_ChAdOx_3_noncoviddeath, tables_model_cox_ChAdOx_3, preflight_ChAdOx_4_anytest, apply_model_cox_ChAdOx_4_anytest, preflight_ChAdOx_4_postest, apply_model_cox_ChAdOx_4_postest, preflight_ChAdOx_4_covidadmitted, apply_model_cox_ChAdOx_4_covidadmitted, preflight_ChAdOx_4_coviddeath, apply_model_cox_ChAdOx_4_coviddeath, preflight_ChAdOx_4_noncoviddeath, apply_model_cox_ChAdOx_4_noncoviddeath, tables_model_cox_ChAdOx_4
Failed
covid-ve-change-over-time-main TPP 33/35 preflight_BNT162b2_2_anytest, apply_model_cox_BNT162b2_2_anytest, preflight_BNT162b2_2_postest, apply_model_cox_BNT162b2_2_postest, preflight_BNT162b2_2_covidadmitted, apply_model_cox_BNT162b2_2_covidadmitted, preflight_BNT162b2_2_coviddeath, apply_model_cox_BNT162b2_2_coviddeath, preflight_BNT162b2_2_noncoviddeath, apply_model_cox_BNT162b2_2_noncoviddeath, tables_model_cox_BNT162b2_2, preflight_BNT162b2_3_anytest, apply_model_cox_BNT162b2_3_anytest, preflight_BNT162b2_3_postest, apply_model_cox_BNT162b2_3_postest, preflight_BNT162b2_3_covidadmitted, apply_model_cox_BNT162b2_3_covidadmitted, preflight_BNT162b2_3_coviddeath, apply_model_cox_BNT162b2_3_coviddeath, preflight_BNT162b2_3_noncoviddeath, apply_model_cox_BNT162b2_3_noncoviddeath, tables_model_cox_BNT162b2_3, preflight_BNT162b2_4_anytest, apply_model_cox_BNT162b2_4_anytest, preflight_BNT162b2_4_postest, apply_model_cox_BNT162b2_4_postest, preflight_BNT162b2_4_covidadmitted, apply_model_cox_BNT162b2_4_covidadmitted, preflight_BNT162b2_4_coviddeath, apply_model_cox_BNT162b2_4_coviddeath, preflight_BNT162b2_4_noncoviddeath, apply_model_cox_BNT162b2_4_noncoviddeath, tables_model_cox_BNT162b2_4, plot_hr_anytest_BNT162b2, plot_hr_BNT162b2
Succeeded
covid-ve-change-over-time-main TPP 17/17 table1, data_comparisons_process, data_tte_process_BNT162b2, data_tte_process_ChAdOx, data_tte_process_both, process_event_count_tables, preflight_BNT162b2_1_anytest, apply_model_cox_BNT162b2_1_anytest, preflight_BNT162b2_1_postest, apply_model_cox_BNT162b2_1_postest, preflight_BNT162b2_1_covidadmitted, apply_model_cox_BNT162b2_1_covidadmitted, preflight_BNT162b2_1_coviddeath, apply_model_cox_BNT162b2_1_coviddeath, preflight_BNT162b2_1_noncoviddeath, apply_model_cox_BNT162b2_1_noncoviddeath, tables_model_cox_BNT162b2_1
Succeeded
covid-ve-change-over-time-main TPP 1/1 table1
Failed
covid-ve-change-over-time-main TPP 0/1 table1
Failed
covid-ve-change-over-time-main TPP 16/17 data_input_process, data_eligible_ab, data_2nd_vax_dates, plot_2nd_vax_dates, data_eligible_cde, dummy_data_tests, generate_covid_tests_data, process_tests, plot_cumulative_incidence, table1, data_comparisons_process, data_tte_process_BNT162b2, data_tte_process_ChAdOx, data_tte_process_both, process_event_count_tables, preflight_BNT162b2_1_anytest, apply_model_cox_BNT162b2_1_anytest
Failed
covid-ve-change-over-time-main TPP 1/16 design, data_input_process, data_eligible_ab, data_2nd_vax_dates, plot_2nd_vax_dates, data_eligible_cde, dummy_data_tests, generate_covid_tests_data, process_tests, plot_cumulative_incidence, table1, data_comparisons_process, data_tte_process_BNT162b2, data_tte_process_ChAdOx, data_tte_process_both, process_event_count_tables
Succeeded
covid-ve-change-over-time-main TPP 5/5 preflight_both_4_postest, apply_model_cox_both_4_postest, preflight_both_4_covidadmitted, apply_model_cox_both_4_covidadmitted, tables_model_cox_both_4
Succeeded
covid-ve-change-over-time-main TPP 3/3 preflight_ChAdOx_4_noncoviddeath, apply_model_cox_ChAdOx_4_noncoviddeath, tables_model_cox_ChAdOx_4