Job request: 13023
- Organisation:
- PHC, University of Oxford
- Workspace:
- mainroute_cancer
- ID:
- a3qijllqkeevu2y6
This page shows the technical details of what happened when the authorised researcher Emma Mi requested one or more actions to be run against real patient data in the project, within a secure environment.
By cross-referencing the list of jobs with the
pipeline section below, you can infer what
security level
various outputs were written to. Researchers can never directly
view outputs marked as
highly_sensitive
;
they can only request that code runs against them. Outputs
marked as
moderately_sensitive
can be viewed by an approved researcher by logging into a highly
secure environment. Only outputs marked as
moderately_sensitive
can be requested for release to the public, via a controlled
output review service.
Jobs
-
- Job identifier:
-
7vx42tbbkbjs6en2
-
- Job identifier:
-
vk7tbzizlcz2yyto
Pipeline
Show project.yaml
version: '3.0'
expectations:
population_size: 1000
actions:
generate_2wwcolorectal_cohort:
run: cohortextractor:latest generate_cohort --study-definition study_definition_2wwcolorectal
outputs:
highly_sensitive:
cohort: output/input_2wwcolorectal.csv
describe:
run: python:latest python analysis/report_2wwcolorectal.py
needs: [generate_2wwcolorectal_cohort]
outputs:
moderately_sensitive:
all_figure: output/colorectal_cancer_10.jpg
all_figure2: output/colorectal_cancer_11.jpg
all_figure3: output/colorectal_cancer_12.jpg
all_figure4: output/colorectal_cancer_13.jpg
all_figure5: output/colorectal_cancer_14.jpg
all_figure6: output/colorectal_cancer_15.jpg
all_figure7: output/colorectal_cancer_16.jpg
all_figure8: output/colorectal_cancer_17.jpg
all_figure9: output/colorectal_cancer_18.jpg
all_figure10: output/colorectal_cancer_19.jpg
all_figure11: output/colorectal_cancer_20.jpg
Timeline
-
Created:
-
Started:
-
Finished:
-
Runtime: 00:53:40
These timestamps are generated and stored using the UTC timezone on the TPP backend.
Job information
- Status
-
Succeeded
- Backend
- TPP
- Workspace
- mainroute_cancer
- Requested by
- Emma Mi
- Branch
- main
- Force run dependencies
- Yes
- Git commit hash
- 59abe6c
- Requested actions
-
-
run_all
-
Code comparison
Compare the code used in this Job Request