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Job request: 5408

Organisation:
Bennett Institute
Workspace:
booster-effectiveness_main
ID:
guwigyc7c7vyzxlm
View repo View project.yaml

This page shows the technical details of what happened when the authorised researcher Will Hulme requested one or more actions to be run against real patient data within a secure environment.

By cross-referencing the list of jobs with the pipeline section below, you can infer what security level the outputs were written to.

The output security levels are:

  • highly_sensitive
    • Researchers can never directly view these outputs
    • Researchers can only request code is run against them
  • moderately_sensitive
    • Can be viewed by an approved researcher by logging into a highly secure environment
    • These are the only outputs that can be requested for public release via a controlled output review service.

Jobs

  • Action:
    match_seqtrialcox_moderna
    Status:
    Failed
    Job identifier:
    mmau3fludpn55xqy
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    match_seqtrialcox_pfizer
    Status:
    Failed
    Job identifier:
    yr5jngitecca6fcw
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    model_seqtrialcox_pfizer_coviddeath_vax12_type-az-az
    Status:
    Failed
    Job identifier:
    txx24uk6nsnd7e7a
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    model_seqtrialcox_pfizer_covidemergency_none
    Status:
    Failed
    Job identifier:
    5g6rft4bex5ym7dj
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    model_seqtrialcox_pfizer_covidemergency_vax12_type-az-az
    Status:
    Failed
    Job identifier:
    gfi7w3xg2xj6cval
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    report_seqtrialcox_moderna_covidadmitted_vax12_type-az-az
    Status:
    Failed
    Job identifier:
    vke77lhk2ichu6ju
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    report_seqtrialcox_moderna_covidadmitted_vax12_type-pfizer-pfizer
    Status:
    Failed
    Job identifier:
    toaw7icrv46hc7ea
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    report_seqtrialcox_moderna_coviddeath_none
    Status:
    Failed
    Job identifier:
    theskuu7psvsn353
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    report_seqtrialcox_moderna_covidemergency_none
    Status:
    Failed
    Job identifier:
    cv7gxiegmxy3uvui
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    report_seqtrialcox_moderna_covidemergency_vax12_type-az-az
    Status:
    Failed
    Job identifier:
    hvhrvl4symornzbx
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    model_seqtrialcox_moderna_postest_vax12_type-pfizer-pfizer
    Status:
    Failed
    Job identifier:
    ktrdgtdi6atgnroi
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    model_seqtrialcox_pfizer_covidemergency_vax12_type-pfizer-pfizer
    Status:
    Failed
    Job identifier:
    gwgxmvlihozx32dt
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    report_seqtrialcox_pfizer_covidadmitted_none
    Status:
    Failed
    Job identifier:
    vw675d5m3u3nx5yo
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    model_seqtrialcox_moderna_coviddeath_none
    Status:
    Failed
    Job identifier:
    ckjxof76h25hmxui
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    report_seqtrialcox_pfizer_coviddeath_vax12_type-pfizer-pfizer
    Status:
    Failed
    Job identifier:
    5oappgzhlv32it54
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    combine_match
    Status:
    Failed
    Job identifier:
    6dntv25oa6ihqeqp
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    report_seqtrialcox_moderna_postest_none
    Status:
    Failed
    Job identifier:
    tf4paptytvzhy3fr
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    report_seqtrialcox_pfizer_covidadmitted_vax12_type-az-az
    Status:
    Failed
    Job identifier:
    onjeamk26ccwbega
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    model_seqtrialcox_pfizer_postest_none
    Status:
    Failed
    Job identifier:
    wxge4ltki6c37b22
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    model_seqtrialcox_moderna_covidadmitted_none
    Status:
    Failed
    Job identifier:
    xboifsznbpw5lzqq
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    combine_model
    Status:
    Failed
    Job identifier:
    xs7j2wwgolnypun4
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    report_seqtrialcox_moderna_postest_vax12_type-pfizer-pfizer
    Status:
    Failed
    Job identifier:
    y5wyqjv4kljsdzhw
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    combine_model_vax12_type
    Status:
    Failed
    Job identifier:
    y2m7azcwdrukay2o
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    model_seqtrialcox_pfizer_postest_vax12_type-pfizer-pfizer
    Status:
    Failed
    Job identifier:
    vwes4ifqtawdr37w
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    manuscript_objects
    Status:
    Failed
    Job identifier:
    6gxiprdrwtxk4lsu
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    model_seqtrialcox_moderna_covidadmitted_vax12_type-az-az
    Status:
    Failed
    Job identifier:
    rmsiauycljb7ulbm
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    model_seqtrialcox_moderna_coviddeath_vax12_type-pfizer-pfizer
    Status:
    Failed
    Job identifier:
    3son7ucl3edch3ko
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    model_seqtrialcox_pfizer_covidadmitted_none
    Status:
    Failed
    Job identifier:
    flqj2zyd7dpw553s
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    report_seqtrialcox_pfizer_coviddeath_none
    Status:
    Failed
    Job identifier:
    qljkpei6yzkfuf4x
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    model_seqtrialcox_pfizer_covidadmitted_vax12_type-az-az
    Status:
    Failed
    Job identifier:
    4y3dh64xoqoqxfpa
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    report_seqtrialcox_moderna_coviddeath_vax12_type-pfizer-pfizer
    Status:
    Failed
    Job identifier:
    dg4k2njyqgm3e4kw
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    report_seqtrialcox_pfizer_coviddeath_vax12_type-az-az
    Status:
    Failed
    Job identifier:
    6cxkqcikwo3ivt4l
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    model_seqtrialcox_moderna_covidemergency_none
    Status:
    Failed
    Job identifier:
    kkjm6i5yzdj467ei
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    model_seqtrialcox_moderna_covidemergency_vax12_type-az-az
    Status:
    Failed
    Job identifier:
    3pypfeavm4hbh66g
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    model_seqtrialcox_moderna_postest_none
    Status:
    Failed
    Job identifier:
    yfpkupazho3zqbdt
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    model_seqtrialcox_moderna_postest_vax12_type-az-az
    Status:
    Failed
    Job identifier:
    6txm2zttupzv5kyv
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    report_seqtrialcox_pfizer_covidemergency_vax12_type-az-az
    Status:
    Failed
    Job identifier:
    lg2j436npehkimva
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    report_seqtrialcox_pfizer_covidemergency_vax12_type-pfizer-pfizer
    Status:
    Failed
    Job identifier:
    k6d2pqnkdbjpinkx
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    report_seqtrialcox_pfizer_postest_vax12_type-az-az
    Status:
    Failed
    Job identifier:
    kxclpzn5argqggnh
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    report_seqtrialcox_pfizer_postest_vax12_type-pfizer-pfizer
    Status:
    Failed
    Job identifier:
    b5u7xywujz74vme7
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    model_seqtrialcox_moderna_covidadmitted_vax12_type-pfizer-pfizer
    Status:
    Failed
    Job identifier:
    fxkksjho33mssfrh
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    model_seqtrialcox_moderna_coviddeath_vax12_type-az-az
    Status:
    Failed
    Job identifier:
    7gvmqzzldnuin3av
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    model_seqtrialcox_moderna_covidemergency_vax12_type-pfizer-pfizer
    Status:
    Failed
    Job identifier:
    lti7ju4jxgi7murc
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    model_seqtrialcox_pfizer_coviddeath_vax12_type-pfizer-pfizer
    Status:
    Failed
    Job identifier:
    343ottebx723bjet
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    model_seqtrialcox_pfizer_postest_vax12_type-az-az
    Status:
    Failed
    Job identifier:
    k6e5bsq6gxd53cug
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    report_seqtrialcox_moderna_covidadmitted_none
    Status:
    Failed
    Job identifier:
    3hudsr5egsmtzas7
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    report_seqtrialcox_moderna_coviddeath_vax12_type-az-az
    Status:
    Failed
    Job identifier:
    3rfxa2jl526kmnuk
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    report_seqtrialcox_moderna_covidemergency_vax12_type-pfizer-pfizer
    Status:
    Failed
    Job identifier:
    q3vlfws2fszzzkiz
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    report_seqtrialcox_moderna_postest_vax12_type-az-az
    Status:
    Failed
    Job identifier:
    6cayznpru6ethdzs
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    report_seqtrialcox_pfizer_covidadmitted_vax12_type-pfizer-pfizer
    Status:
    Failed
    Job identifier:
    4nfw2z5pr4345uzo
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    report_seqtrialcox_pfizer_covidemergency_none
    Status:
    Failed
    Job identifier:
    xx3gx4jeuq4xq5f6
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    model_seqtrialcox_pfizer_covidadmitted_vax12_type-pfizer-pfizer
    Status:
    Failed
    Job identifier:
    5gzkkbzthmqofyll
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    report_seqtrialcox_pfizer_postest_none
    Status:
    Failed
    Job identifier:
    w2q7sudjcmtbbevi
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    model_seqtrialcox_pfizer_coviddeath_none
    Status:
    Failed
    Job identifier:
    zakvrp5m6p323dmr
    Error:
    cancelled_by_user: Cancelled by user

Pipeline

Show project.yaml
This file is too large to render, try viewing it on GitHub .

Timeline

  • Created:

  • Started:

  • Finished:

  • Runtime: 01:23:43

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job request

Status
Failed
Backend
TPP
Workspace
booster-effectiveness_main
Requested by
Will Hulme
Branch
main
Force run dependencies
No
Git commit hash
093bd9d
Requested actions
  • match_seqtrialcox_pfizer
  • match_seqtrialcox_moderna
  • model_seqtrialcox_pfizer_postest_none
  • report_seqtrialcox_pfizer_postest_none
  • model_seqtrialcox_pfizer_postest_vax12_type-az-az
  • report_seqtrialcox_pfizer_postest_vax12_type-az-az
  • model_seqtrialcox_pfizer_postest_vax12_type-pfizer-pfizer
  • report_seqtrialcox_pfizer_postest_vax12_type-pfizer-pfizer
  • model_seqtrialcox_moderna_postest_none
  • report_seqtrialcox_moderna_postest_none
  • model_seqtrialcox_moderna_postest_vax12_type-az-az
  • report_seqtrialcox_moderna_postest_vax12_type-az-az
  • model_seqtrialcox_moderna_postest_vax12_type-pfizer-pfizer
  • report_seqtrialcox_moderna_postest_vax12_type-pfizer-pfizer
  • model_seqtrialcox_pfizer_covidemergency_none
  • report_seqtrialcox_pfizer_covidemergency_none
  • model_seqtrialcox_pfizer_covidemergency_vax12_type-az-az
  • report_seqtrialcox_pfizer_covidemergency_vax12_type-az-az
  • model_seqtrialcox_pfizer_covidemergency_vax12_type-pfizer-pfizer
  • report_seqtrialcox_pfizer_covidemergency_vax12_type-pfizer-pfizer
  • model_seqtrialcox_moderna_covidemergency_none
  • report_seqtrialcox_moderna_covidemergency_none
  • model_seqtrialcox_moderna_covidemergency_vax12_type-az-az
  • report_seqtrialcox_moderna_covidemergency_vax12_type-az-az
  • model_seqtrialcox_moderna_covidemergency_vax12_type-pfizer-pfizer
  • report_seqtrialcox_moderna_covidemergency_vax12_type-pfizer-pfizer
  • model_seqtrialcox_pfizer_covidadmitted_none
  • report_seqtrialcox_pfizer_covidadmitted_none
  • model_seqtrialcox_pfizer_covidadmitted_vax12_type-az-az
  • report_seqtrialcox_pfizer_covidadmitted_vax12_type-az-az
  • model_seqtrialcox_pfizer_covidadmitted_vax12_type-pfizer-pfizer
  • report_seqtrialcox_pfizer_covidadmitted_vax12_type-pfizer-pfizer
  • model_seqtrialcox_moderna_covidadmitted_none
  • report_seqtrialcox_moderna_covidadmitted_none
  • model_seqtrialcox_moderna_covidadmitted_vax12_type-az-az
  • report_seqtrialcox_moderna_covidadmitted_vax12_type-az-az
  • model_seqtrialcox_moderna_covidadmitted_vax12_type-pfizer-pfizer
  • report_seqtrialcox_moderna_covidadmitted_vax12_type-pfizer-pfizer
  • model_seqtrialcox_pfizer_coviddeath_none
  • report_seqtrialcox_pfizer_coviddeath_none
  • model_seqtrialcox_pfizer_coviddeath_vax12_type-az-az
  • report_seqtrialcox_pfizer_coviddeath_vax12_type-az-az
  • model_seqtrialcox_pfizer_coviddeath_vax12_type-pfizer-pfizer
  • report_seqtrialcox_pfizer_coviddeath_vax12_type-pfizer-pfizer
  • model_seqtrialcox_moderna_coviddeath_none
  • report_seqtrialcox_moderna_coviddeath_none
  • model_seqtrialcox_moderna_coviddeath_vax12_type-az-az
  • report_seqtrialcox_moderna_coviddeath_vax12_type-az-az
  • model_seqtrialcox_moderna_coviddeath_vax12_type-pfizer-pfizer
  • report_seqtrialcox_moderna_coviddeath_vax12_type-pfizer-pfizer
  • combine_match
  • combine_model
  • combine_model_vax12_type
  • manuscript_objects

Code comparison

Compare the code used in this job request