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Job request: 5410

Organisation:
Bennett Institute
Workspace:
booster-effectiveness_main
ID:
ukkqpkdz74xgnjpb
View repo View project.yaml

This page shows the technical details of what happened when the authorised researcher Will Hulme requested one or more actions to be run against real patient data within a secure environment.

By cross-referencing the list of jobs with the pipeline section below, you can infer what security level the outputs were written to.

The output security levels are:

  • highly_sensitive
    • Researchers can never directly view these outputs
    • Researchers can only request code is run against them
  • moderately_sensitive
    • Can be viewed by an approved researcher by logging into a highly secure environment
    • These are the only outputs that can be requested for public release via a controlled output review service.

Jobs

  • Action:
    match_seqtrialcox_pfizer
    Status:
    Failed
    Job identifier:
    2nki5qbr2o2casre
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    match_seqtrialcox_moderna
    Status:
    Failed
    Job identifier:
    ixfr7rrtrlrt4u7l
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    manuscript_objects
    Status:
    Failed
    Job identifier:
    jcap7hjloezefvj4
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    model_seqtrialcox_moderna_covidadmitted_vax12_type-az-az
    Status:
    Failed
    Job identifier:
    c4sz4gzirxzygwuz
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    model_seqtrialcox_moderna_covidadmitted_vax12_type-pfizer-pfizer
    Status:
    Failed
    Job identifier:
    onmzsvmlq5glgos7
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    model_seqtrialcox_moderna_coviddeath_none
    Status:
    Failed
    Job identifier:
    klgm63vuqzfg3slu
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    model_seqtrialcox_moderna_coviddeath_vax12_type-pfizer-pfizer
    Status:
    Failed
    Job identifier:
    uty763ezop327w5n
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    model_seqtrialcox_pfizer_postest_none
    Status:
    Failed
    Job identifier:
    dk4jonxtryn3cyv6
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    report_seqtrialcox_moderna_covidadmitted_none
    Status:
    Failed
    Job identifier:
    twwqchqlddpmf5tp
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    report_seqtrialcox_moderna_coviddeath_none
    Status:
    Failed
    Job identifier:
    gffwau6z6ispt6gi
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    report_seqtrialcox_moderna_coviddeath_vax12_type-az-az
    Status:
    Failed
    Job identifier:
    xqbkpkssxhuuzh74
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    report_seqtrialcox_moderna_covidemergency_none
    Status:
    Failed
    Job identifier:
    r6rurus4jyzvdxp7
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    report_seqtrialcox_moderna_covidemergency_vax12_type-az-az
    Status:
    Failed
    Job identifier:
    mh5sniu5d6kl5woh
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    report_seqtrialcox_moderna_postest_vax12_type-az-az
    Status:
    Failed
    Job identifier:
    vm33th5zcbythdiv
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    report_seqtrialcox_pfizer_covidadmitted_none
    Status:
    Failed
    Job identifier:
    vgqesvzkmqzmlwby
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    report_seqtrialcox_pfizer_coviddeath_vax12_type-az-az
    Status:
    Failed
    Job identifier:
    bycp6tpyg4wk4csp
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    report_seqtrialcox_pfizer_covidemergency_none
    Status:
    Failed
    Job identifier:
    tik6ru72pmijty4r
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    model_seqtrialcox_moderna_covidemergency_vax12_type-az-az
    Status:
    Failed
    Job identifier:
    lrqczv54i7iozo2a
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    model_seqtrialcox_moderna_postest_vax12_type-az-az
    Status:
    Failed
    Job identifier:
    hbtu3ghjtrruiohf
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    model_seqtrialcox_pfizer_covidadmitted_vax12_type-az-az
    Status:
    Failed
    Job identifier:
    bqqpppcpy5kxmrrd
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    model_seqtrialcox_pfizer_covidadmitted_vax12_type-pfizer-pfizer
    Status:
    Failed
    Job identifier:
    trfk5goiylqx23h5
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    model_seqtrialcox_pfizer_coviddeath_none
    Status:
    Failed
    Job identifier:
    sfi6fin6r4colq4h
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    model_seqtrialcox_pfizer_coviddeath_vax12_type-pfizer-pfizer
    Status:
    Failed
    Job identifier:
    5wlhlhlpq77xrtzf
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    model_seqtrialcox_pfizer_covidemergency_none
    Status:
    Failed
    Job identifier:
    b6cgciie7v2rn5mk
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    model_seqtrialcox_pfizer_covidemergency_vax12_type-pfizer-pfizer
    Status:
    Failed
    Job identifier:
    5jnxm5xfb3euunmt
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    model_seqtrialcox_pfizer_postest_vax12_type-pfizer-pfizer
    Status:
    Failed
    Job identifier:
    y3rwcbzpmdvt2gpn
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    report_seqtrialcox_moderna_covidemergency_vax12_type-pfizer-pfizer
    Status:
    Failed
    Job identifier:
    f2opxvpalrbgeqhz
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    report_seqtrialcox_moderna_postest_none
    Status:
    Failed
    Job identifier:
    jf7m34dnhi7gsn7z
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    report_seqtrialcox_pfizer_coviddeath_vax12_type-pfizer-pfizer
    Status:
    Failed
    Job identifier:
    q2jsvb73cluv623r
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    report_seqtrialcox_pfizer_postest_none
    Status:
    Failed
    Job identifier:
    hpj436dxhtagqqlh
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    model_seqtrialcox_moderna_covidemergency_none
    Status:
    Failed
    Job identifier:
    ouhsrmqtunxqzqi4
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    model_seqtrialcox_moderna_postest_vax12_type-pfizer-pfizer
    Status:
    Failed
    Job identifier:
    t6kxnkqxwpv4ivrx
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    model_seqtrialcox_pfizer_postest_vax12_type-az-az
    Status:
    Failed
    Job identifier:
    c5k2rpcga3a4fhla
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    report_seqtrialcox_pfizer_covidadmitted_vax12_type-az-az
    Status:
    Failed
    Job identifier:
    jifjw3e4ydnfw4em
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    report_seqtrialcox_pfizer_covidadmitted_vax12_type-pfizer-pfizer
    Status:
    Failed
    Job identifier:
    nebgvim526ue6xbj
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    report_seqtrialcox_pfizer_coviddeath_none
    Status:
    Failed
    Job identifier:
    pkvokpxzhikag73o
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    report_seqtrialcox_pfizer_covidemergency_vax12_type-pfizer-pfizer
    Status:
    Failed
    Job identifier:
    ag2bzlvx55y2zhnw
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    report_seqtrialcox_pfizer_postest_vax12_type-az-az
    Status:
    Failed
    Job identifier:
    gnrlmvcqzufpbarv
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    combine_model_vax12_type
    Status:
    Failed
    Job identifier:
    qhslkorzv4vedaki
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    model_seqtrialcox_moderna_covidadmitted_none
    Status:
    Failed
    Job identifier:
    74buekzip4hqnt2o
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    model_seqtrialcox_moderna_coviddeath_vax12_type-az-az
    Status:
    Failed
    Job identifier:
    q3i2zvuaiy5aejuu
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    model_seqtrialcox_moderna_covidemergency_vax12_type-pfizer-pfizer
    Status:
    Failed
    Job identifier:
    2kumswaokmgwalta
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    model_seqtrialcox_moderna_postest_none
    Status:
    Failed
    Job identifier:
    osi42lgczkxoyce7
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    model_seqtrialcox_pfizer_covidadmitted_none
    Status:
    Failed
    Job identifier:
    n32kl7vze7fyl2dz
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    model_seqtrialcox_pfizer_coviddeath_vax12_type-az-az
    Status:
    Failed
    Job identifier:
    en7gkzs7gqaf2gqr
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    model_seqtrialcox_pfizer_covidemergency_vax12_type-az-az
    Status:
    Failed
    Job identifier:
    pa76um2cn6npby5x
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    report_seqtrialcox_moderna_covidadmitted_vax12_type-az-az
    Status:
    Failed
    Job identifier:
    6zzwwc4rrca7hpvd
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    report_seqtrialcox_moderna_covidadmitted_vax12_type-pfizer-pfizer
    Status:
    Failed
    Job identifier:
    njckx44gfuyt56en
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    report_seqtrialcox_moderna_coviddeath_vax12_type-pfizer-pfizer
    Status:
    Failed
    Job identifier:
    yrl5zddpn4omzzjp
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    report_seqtrialcox_moderna_postest_vax12_type-pfizer-pfizer
    Status:
    Failed
    Job identifier:
    tgnm3gub4k5wn5d4
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    report_seqtrialcox_pfizer_covidemergency_vax12_type-az-az
    Status:
    Failed
    Job identifier:
    rsavrhswe2ut3cm6
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    combine_match
    Status:
    Failed
    Job identifier:
    vloirsbt45rhzzez
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    report_seqtrialcox_pfizer_postest_vax12_type-pfizer-pfizer
    Status:
    Failed
    Job identifier:
    kx3u35vf65zfsbdg
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    combine_model
    Status:
    Failed
    Job identifier:
    yp3polab3vexxhlg
    Error:
    dependency_failed: Not starting as dependency failed

Pipeline

Show project.yaml
This file is too large to render, try viewing it on GitHub .

Timeline

  • Created:

  • Started:

  • Finished:

  • Runtime: 00:29:34

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job request

Status
Failed
Backend
TPP
Workspace
booster-effectiveness_main
Requested by
Will Hulme
Branch
main
Force run dependencies
No
Git commit hash
fe29d93
Requested actions
  • match_seqtrialcox_pfizer
  • match_seqtrialcox_moderna
  • model_seqtrialcox_pfizer_postest_none
  • report_seqtrialcox_pfizer_postest_none
  • model_seqtrialcox_pfizer_postest_vax12_type-az-az
  • report_seqtrialcox_pfizer_postest_vax12_type-az-az
  • model_seqtrialcox_pfizer_postest_vax12_type-pfizer-pfizer
  • report_seqtrialcox_pfizer_postest_vax12_type-pfizer-pfizer
  • model_seqtrialcox_moderna_postest_none
  • report_seqtrialcox_moderna_postest_none
  • model_seqtrialcox_moderna_postest_vax12_type-az-az
  • report_seqtrialcox_moderna_postest_vax12_type-az-az
  • model_seqtrialcox_moderna_postest_vax12_type-pfizer-pfizer
  • report_seqtrialcox_moderna_postest_vax12_type-pfizer-pfizer
  • model_seqtrialcox_pfizer_covidemergency_none
  • report_seqtrialcox_pfizer_covidemergency_none
  • model_seqtrialcox_pfizer_covidemergency_vax12_type-az-az
  • report_seqtrialcox_pfizer_covidemergency_vax12_type-az-az
  • model_seqtrialcox_pfizer_covidemergency_vax12_type-pfizer-pfizer
  • report_seqtrialcox_pfizer_covidemergency_vax12_type-pfizer-pfizer
  • model_seqtrialcox_moderna_covidemergency_none
  • report_seqtrialcox_moderna_covidemergency_none
  • model_seqtrialcox_moderna_covidemergency_vax12_type-az-az
  • report_seqtrialcox_moderna_covidemergency_vax12_type-az-az
  • model_seqtrialcox_moderna_covidemergency_vax12_type-pfizer-pfizer
  • report_seqtrialcox_moderna_covidemergency_vax12_type-pfizer-pfizer
  • model_seqtrialcox_pfizer_covidadmitted_none
  • report_seqtrialcox_pfizer_covidadmitted_none
  • model_seqtrialcox_pfizer_covidadmitted_vax12_type-az-az
  • report_seqtrialcox_pfizer_covidadmitted_vax12_type-az-az
  • model_seqtrialcox_pfizer_covidadmitted_vax12_type-pfizer-pfizer
  • report_seqtrialcox_pfizer_covidadmitted_vax12_type-pfizer-pfizer
  • model_seqtrialcox_moderna_covidadmitted_none
  • report_seqtrialcox_moderna_covidadmitted_none
  • model_seqtrialcox_moderna_covidadmitted_vax12_type-az-az
  • report_seqtrialcox_moderna_covidadmitted_vax12_type-az-az
  • model_seqtrialcox_moderna_covidadmitted_vax12_type-pfizer-pfizer
  • report_seqtrialcox_moderna_covidadmitted_vax12_type-pfizer-pfizer
  • model_seqtrialcox_pfizer_coviddeath_none
  • report_seqtrialcox_pfizer_coviddeath_none
  • model_seqtrialcox_pfizer_coviddeath_vax12_type-az-az
  • report_seqtrialcox_pfizer_coviddeath_vax12_type-az-az
  • model_seqtrialcox_pfizer_coviddeath_vax12_type-pfizer-pfizer
  • report_seqtrialcox_pfizer_coviddeath_vax12_type-pfizer-pfizer
  • model_seqtrialcox_moderna_coviddeath_none
  • report_seqtrialcox_moderna_coviddeath_none
  • model_seqtrialcox_moderna_coviddeath_vax12_type-az-az
  • report_seqtrialcox_moderna_coviddeath_vax12_type-az-az
  • model_seqtrialcox_moderna_coviddeath_vax12_type-pfizer-pfizer
  • report_seqtrialcox_moderna_coviddeath_vax12_type-pfizer-pfizer
  • combine_match
  • combine_model
  • combine_model_vax12_type
  • manuscript_objects

Code comparison

Compare the code used in this job request