Skip to content

Job request: 5412

Organisation:
Bennett Institute
Workspace:
booster-effectiveness_main
ID:
cqf5aopp7xynp3rt

This page shows the technical details of what happened when the authorised researcher Will Hulme requested one or more actions to be run against real patient data within a secure environment.

By cross-referencing the list of jobs with the pipeline section below, you can infer what security level the outputs were written to.

The output security levels are:

  • highly_sensitive
    • Researchers can never directly view these outputs
    • Researchers can only request code is run against them
  • moderately_sensitive
    • Can be viewed by an approved researcher by logging into a highly secure environment
    • These are the only outputs that can be requested for public release via a controlled output review service.

Jobs

  • Action:
    match_seqtrialcox_moderna
    Status:
    Succeeded
    Job identifier:
    b3xaslbzo65hf5y4
  • Action:
    match_seqtrialcox_pfizer
    Status:
    Succeeded
    Job identifier:
    rjoqehzqfyp6xer7
  • Action:
    model_seqtrialcox_moderna_covidadmitted_vax12_type-pfizer-pfizer
    Status:
    Succeeded
    Job identifier:
    aar5f2m3i7gjy5u6
  • Action:
    model_seqtrialcox_moderna_coviddeath_vax12_type-pfizer-pfizer
    Status:
    Succeeded
    Job identifier:
    pu3vp5dwhx2hc4rf
  • Action:
    model_seqtrialcox_moderna_covidemergency_vax12_type-pfizer-pfizer
    Status:
    Succeeded
    Job identifier:
    xgql5pds3kyc7haa
  • Action:
    model_seqtrialcox_moderna_covidemergency_vax12_type-az-az
    Status:
    Succeeded
    Job identifier:
    ls226mdmufwsrd3i
  • Action:
    model_seqtrialcox_moderna_coviddeath_none
    Status:
    Succeeded
    Job identifier:
    554zr7ankklea4xu
  • Action:
    model_seqtrialcox_moderna_coviddeath_vax12_type-az-az
    Status:
    Succeeded
    Job identifier:
    3534ic5wisnqkvxl
  • Action:
    model_seqtrialcox_moderna_postest_vax12_type-az-az
    Status:
    Succeeded
    Job identifier:
    qyae4lmsgvyj55ya
  • Action:
    model_seqtrialcox_moderna_postest_vax12_type-pfizer-pfizer
    Status:
    Succeeded
    Job identifier:
    cw2na55jh5thl3ox
  • Action:
    model_seqtrialcox_moderna_covidadmitted_none
    Status:
    Succeeded
    Job identifier:
    e35akoo3bhdoyuoy
  • Action:
    model_seqtrialcox_moderna_covidadmitted_vax12_type-az-az
    Status:
    Succeeded
    Job identifier:
    xza2r3ihyjbfx3hv
  • Action:
    model_seqtrialcox_moderna_postest_none
    Status:
    Succeeded
    Job identifier:
    tcswwat2xggtkfoa
  • Action:
    model_seqtrialcox_moderna_covidemergency_none
    Status:
    Succeeded
    Job identifier:
    pu3uwwchnppblhw5
  • Action:
    report_seqtrialcox_moderna_covidadmitted_vax12_type-pfizer-pfizer
    Status:
    Succeeded
    Job identifier:
    kap2u4bwdz36rx4d
  • Action:
    report_seqtrialcox_moderna_covidemergency_vax12_type-pfizer-pfizer
    Status:
    Succeeded
    Job identifier:
    kk5f5oyprnk63ver
  • Action:
    report_seqtrialcox_moderna_coviddeath_vax12_type-pfizer-pfizer
    Status:
    Succeeded
    Job identifier:
    smdw7asww5xyoymu
  • Action:
    report_seqtrialcox_moderna_postest_vax12_type-pfizer-pfizer
    Status:
    Succeeded
    Job identifier:
    gqvj7l7shpdicvjv
  • Action:
    model_seqtrialcox_pfizer_covidemergency_vax12_type-az-az
    Status:
    Succeeded
    Job identifier:
    evfxuljeyhxgvx7a
  • Action:
    model_seqtrialcox_pfizer_postest_vax12_type-az-az
    Status:
    Succeeded
    Job identifier:
    4rzszwtaz25mhbrt
  • Action:
    model_seqtrialcox_pfizer_postest_vax12_type-pfizer-pfizer
    Status:
    Succeeded
    Job identifier:
    vsigvvpdxktk3otn
  • Action:
    model_seqtrialcox_pfizer_covidadmitted_vax12_type-pfizer-pfizer
    Status:
    Succeeded
    Job identifier:
    viklpv7bgjft4ubb
  • Action:
    report_seqtrialcox_moderna_covidemergency_vax12_type-az-az
    Status:
    Succeeded
    Job identifier:
    zkmrtdqfhmcw4zts
  • Action:
    model_seqtrialcox_pfizer_coviddeath_none
    Status:
    Failed
    Job identifier:
    3ni2tpiitk63tpsu
    Error:
    nonzero_exit: Job exited with error code 137: likely means it ran out of memory
  • Action:
    model_seqtrialcox_pfizer_coviddeath_vax12_type-pfizer-pfizer
    Status:
    Succeeded
    Job identifier:
    yw3cf4jfibrkjdah
  • Action:
    report_seqtrialcox_moderna_coviddeath_vax12_type-az-az
    Status:
    Succeeded
    Job identifier:
    si4gddqtpqet5yqt
  • Action:
    model_seqtrialcox_pfizer_covidemergency_vax12_type-pfizer-pfizer
    Status:
    Succeeded
    Job identifier:
    og7353sifhvpz2hr
  • Action:
    model_seqtrialcox_pfizer_covidadmitted_none
    Status:
    Succeeded
    Job identifier:
    dj7ezzeonwgm24o7
  • Action:
    model_seqtrialcox_pfizer_postest_none
    Status:
    Succeeded
    Job identifier:
    sticqwabsqbrrrww
  • Action:
    model_seqtrialcox_pfizer_covidemergency_none
    Status:
    Failed
    Job identifier:
    mqqtno2jykkaz4xg
    Error:
    nonzero_exit: Job exited with error code 137: likely means it ran out of memory
  • Action:
    model_seqtrialcox_pfizer_coviddeath_vax12_type-az-az
    Status:
    Succeeded
    Job identifier:
    3e4ss635tbr4zvzy
  • Action:
    combine_match
    Status:
    Succeeded
    Job identifier:
    upaazkmuhrsm34mn
  • Action:
    report_seqtrialcox_moderna_postest_none
    Status:
    Succeeded
    Job identifier:
    uzd4x4y6l5v6xkif
  • Action:
    report_seqtrialcox_moderna_postest_vax12_type-az-az
    Status:
    Succeeded
    Job identifier:
    ax44wmwvkjs6rkeo
  • Action:
    model_seqtrialcox_pfizer_covidadmitted_vax12_type-az-az
    Status:
    Succeeded
    Job identifier:
    tvadhfzqnl45jru2
  • Action:
    report_seqtrialcox_moderna_coviddeath_none
    Status:
    Succeeded
    Job identifier:
    wlz6i7px5wkizgin
  • Action:
    report_seqtrialcox_moderna_covidadmitted_none
    Status:
    Succeeded
    Job identifier:
    vbxignbuhxewii22
  • Action:
    report_seqtrialcox_moderna_covidadmitted_vax12_type-az-az
    Status:
    Succeeded
    Job identifier:
    4tftyf2en3dofbve
  • Action:
    report_seqtrialcox_moderna_covidemergency_none
    Status:
    Succeeded
    Job identifier:
    aab7z6pzx63cm5le
  • Action:
    report_seqtrialcox_pfizer_coviddeath_vax12_type-pfizer-pfizer
    Status:
    Succeeded
    Job identifier:
    n2peviujyvul7ord
  • Action:
    report_seqtrialcox_pfizer_covidadmitted_vax12_type-pfizer-pfizer
    Status:
    Succeeded
    Job identifier:
    in25tlye5jldnnmq
  • Action:
    report_seqtrialcox_pfizer_covidemergency_vax12_type-pfizer-pfizer
    Status:
    Succeeded
    Job identifier:
    62s3zxrinumoteao
  • Action:
    report_seqtrialcox_pfizer_postest_vax12_type-pfizer-pfizer
    Status:
    Succeeded
    Job identifier:
    q2lpfsuuvj4qrvwb
  • Action:
    report_seqtrialcox_pfizer_covidemergency_vax12_type-az-az
    Status:
    Succeeded
    Job identifier:
    4glqdi7lrx7xcqdg
  • Action:
    report_seqtrialcox_pfizer_coviddeath_vax12_type-az-az
    Status:
    Succeeded
    Job identifier:
    em7tryf2g63zdayo
  • Action:
    report_seqtrialcox_pfizer_covidadmitted_vax12_type-az-az
    Status:
    Succeeded
    Job identifier:
    gria63hzy653q5rr
  • Action:
    report_seqtrialcox_pfizer_postest_vax12_type-az-az
    Status:
    Succeeded
    Job identifier:
    dasrcrsintebg7dg
  • Action:
    combine_model_vax12_type
    Status:
    Succeeded
    Job identifier:
    3b7za23s53aant3u
  • Action:
    report_seqtrialcox_pfizer_covidadmitted_none
    Status:
    Succeeded
    Job identifier:
    lep5ianyuhktxfrt
  • Action:
    report_seqtrialcox_pfizer_postest_none
    Status:
    Succeeded
    Job identifier:
    yw2lu7optrydey4a
  • Action:
    report_seqtrialcox_pfizer_coviddeath_none
    Status:
    Failed
    Job identifier:
    kgklpfrvap2cemto
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    report_seqtrialcox_pfizer_covidemergency_none
    Status:
    Failed
    Job identifier:
    qyopy7w4lqtsg4uy
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    combine_model
    Status:
    Failed
    Job identifier:
    uguikezj7ofqm4qw
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    manuscript_objects
    Status:
    Failed
    Job identifier:
    r4tklpr7wmy2eu3z
    Error:
    dependency_failed: Not starting as dependency failed

Pipeline

Show project.yaml
This file is too large to render, try viewing it on GitHub .

Timeline

  • Created:

  • Started:

  • Finished:

  • Runtime: 44:14:50

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job request

Status
Failed
Backend
TPP
Requested by
Will Hulme
Branch
main
Force run dependencies
No
Git commit hash
cbfca0b
Requested actions
  • match_seqtrialcox_pfizer
  • match_seqtrialcox_moderna
  • model_seqtrialcox_pfizer_postest_none
  • report_seqtrialcox_pfizer_postest_none
  • model_seqtrialcox_pfizer_postest_vax12_type-az-az
  • report_seqtrialcox_pfizer_postest_vax12_type-az-az
  • model_seqtrialcox_pfizer_postest_vax12_type-pfizer-pfizer
  • report_seqtrialcox_pfizer_postest_vax12_type-pfizer-pfizer
  • model_seqtrialcox_moderna_postest_none
  • report_seqtrialcox_moderna_postest_none
  • model_seqtrialcox_moderna_postest_vax12_type-az-az
  • report_seqtrialcox_moderna_postest_vax12_type-az-az
  • model_seqtrialcox_moderna_postest_vax12_type-pfizer-pfizer
  • report_seqtrialcox_moderna_postest_vax12_type-pfizer-pfizer
  • model_seqtrialcox_pfizer_covidemergency_none
  • report_seqtrialcox_pfizer_covidemergency_none
  • model_seqtrialcox_pfizer_covidemergency_vax12_type-az-az
  • report_seqtrialcox_pfizer_covidemergency_vax12_type-az-az
  • model_seqtrialcox_pfizer_covidemergency_vax12_type-pfizer-pfizer
  • report_seqtrialcox_pfizer_covidemergency_vax12_type-pfizer-pfizer
  • model_seqtrialcox_moderna_covidemergency_none
  • report_seqtrialcox_moderna_covidemergency_none
  • model_seqtrialcox_moderna_covidemergency_vax12_type-az-az
  • report_seqtrialcox_moderna_covidemergency_vax12_type-az-az
  • model_seqtrialcox_moderna_covidemergency_vax12_type-pfizer-pfizer
  • report_seqtrialcox_moderna_covidemergency_vax12_type-pfizer-pfizer
  • model_seqtrialcox_pfizer_covidadmitted_none
  • report_seqtrialcox_pfizer_covidadmitted_none
  • model_seqtrialcox_pfizer_covidadmitted_vax12_type-az-az
  • report_seqtrialcox_pfizer_covidadmitted_vax12_type-az-az
  • model_seqtrialcox_pfizer_covidadmitted_vax12_type-pfizer-pfizer
  • report_seqtrialcox_pfizer_covidadmitted_vax12_type-pfizer-pfizer
  • model_seqtrialcox_moderna_covidadmitted_none
  • report_seqtrialcox_moderna_covidadmitted_none
  • model_seqtrialcox_moderna_covidadmitted_vax12_type-az-az
  • report_seqtrialcox_moderna_covidadmitted_vax12_type-az-az
  • model_seqtrialcox_moderna_covidadmitted_vax12_type-pfizer-pfizer
  • report_seqtrialcox_moderna_covidadmitted_vax12_type-pfizer-pfizer
  • model_seqtrialcox_pfizer_coviddeath_none
  • report_seqtrialcox_pfizer_coviddeath_none
  • model_seqtrialcox_pfizer_coviddeath_vax12_type-az-az
  • report_seqtrialcox_pfizer_coviddeath_vax12_type-az-az
  • model_seqtrialcox_pfizer_coviddeath_vax12_type-pfizer-pfizer
  • report_seqtrialcox_pfizer_coviddeath_vax12_type-pfizer-pfizer
  • model_seqtrialcox_moderna_coviddeath_none
  • report_seqtrialcox_moderna_coviddeath_none
  • model_seqtrialcox_moderna_coviddeath_vax12_type-az-az
  • report_seqtrialcox_moderna_coviddeath_vax12_type-az-az
  • model_seqtrialcox_moderna_coviddeath_vax12_type-pfizer-pfizer
  • report_seqtrialcox_moderna_coviddeath_vax12_type-pfizer-pfizer
  • combine_match
  • combine_model
  • combine_model_vax12_type
  • manuscript_objects

Code comparison

Compare the code used in this job request