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Job request: 5688

Organisation:
Bennett Institute
Workspace:
booster-effectiveness_main
ID:
63dimgknwbadjdgp
View repo View project.yaml

This page shows the technical details of what happened when the authorised researcher Will Hulme requested one or more actions to be run against real patient data within a secure environment.

By cross-referencing the list of jobs with the pipeline section below, you can infer what security level the outputs were written to.

The output security levels are:

  • highly_sensitive
    • Researchers can never directly view these outputs
    • Researchers can only request code is run against them
  • moderately_sensitive
    • Can be viewed by an approved researcher by logging into a highly secure environment
    • These are the only outputs that can be requested for public release via a controlled output review service.

Jobs

  • Action:
    data_selection
    Status:
    Succeeded
    Job identifier:
    idlgr34kd2wwmbvh
  • Action:
    match_seqtrialcox_pfizer
    Status:
    Succeeded
    Job identifier:
    4tmpmwu5t4dy4o5i
  • Action:
    skim_selection
    Status:
    Succeeded
    Job identifier:
    32k45rrc7gspt5yc
  • Action:
    match_seqtrialcox_moderna
    Status:
    Succeeded
    Job identifier:
    howk36ngmsnjxgrt
  • Action:
    descriptive_vaxdate
    Status:
    Succeeded
    Job identifier:
    iy2ef2rgol52g43o
  • Action:
    merge_seqtrialcox_moderna
    Status:
    Succeeded
    Job identifier:
    kco2tenqjil74l67
  • Action:
    model_seqtrialcox_pfizer_covidadmittedproxy1_none
    Status:
    Failed
    Job identifier:
    c7raf6kneuvk3rv5
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    model_seqtrialcox_pfizer_postest_none
    Status:
    Failed
    Job identifier:
    zabub7pnkzulwxjf
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    model_seqtrialcox_pfizer_covidadmittedproxy1_vax12_type-az-az
    Status:
    Failed
    Job identifier:
    qewmmruchraz4nzr
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    model_seqtrialcox_pfizer_covidadmitted_vax12_type-pfizer-pfizer
    Status:
    Failed
    Job identifier:
    woshtqyjbztboifn
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    model_seqtrialcox_pfizer_covidadmittedproxy1_vax12_type-pfizer-pfizer
    Status:
    Failed
    Job identifier:
    r5sogxxusgqkyaxw
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    model_seqtrialcox_pfizer_postest_vax12_type-az-az
    Status:
    Failed
    Job identifier:
    bdbshlorplhn3dac
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    model_seqtrialcox_pfizer_postest_vax12_type-pfizer-pfizer
    Status:
    Failed
    Job identifier:
    t54eenqajbl7nc44
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    model_seqtrialcox_pfizer_covidadmitted_vax12_type-az-az
    Status:
    Failed
    Job identifier:
    p3hdf6o3l7hp4gxx
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    model_seqtrialcox_pfizer_covidadmitted_none
    Status:
    Failed
    Job identifier:
    3vxzosj65gewd7v2
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    merge_seqtrialcox_pfizer
    Status:
    Succeeded
    Job identifier:
    xgyahnjjr7qsklts
  • Action:
    combine_match
    Status:
    Succeeded
    Job identifier:
    ucbaovaofn7pvrzd
  • Action:
    report_seqtrialcox_pfizer_covidadmittedproxy1_none
    Status:
    Failed
    Job identifier:
    4ej7e2abdyt5o5vv
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    report_seqtrialcox_pfizer_postest_none
    Status:
    Failed
    Job identifier:
    vweey5hfzknznttn
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    report_seqtrialcox_pfizer_postest_vax12_type-az-az
    Status:
    Failed
    Job identifier:
    iz2rguywbw7bsnbq
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    report_seqtrialcox_pfizer_postest_vax12_type-pfizer-pfizer
    Status:
    Failed
    Job identifier:
    eomk6nmrwrfnqc7x
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    report_seqtrialcox_pfizer_covidadmitted_vax12_type-pfizer-pfizer
    Status:
    Failed
    Job identifier:
    6wggn34z3ermyobp
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    report_seqtrialcox_pfizer_covidadmitted_none
    Status:
    Failed
    Job identifier:
    nuxqe67gk2wtia2d
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    report_seqtrialcox_pfizer_covidadmittedproxy1_vax12_type-pfizer-pfizer
    Status:
    Failed
    Job identifier:
    zssmoi52ktrk7kic
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    report_seqtrialcox_pfizer_covidadmittedproxy1_vax12_type-az-az
    Status:
    Failed
    Job identifier:
    wyuly6oxeghlklmk
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    report_seqtrialcox_pfizer_covidadmitted_vax12_type-az-az
    Status:
    Failed
    Job identifier:
    rlpocdxe4cnw47mj
    Error:
    dependency_failed: Not starting as dependency failed

Pipeline

Show project.yaml
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Timeline

  • Created:

  • Started:

  • Finished:

  • Runtime: 28:01:54

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job request

Status
Failed
Backend
TPP
Workspace
booster-effectiveness_main
Requested by
Will Hulme
Branch
main
Force run dependencies
No
Git commit hash
02de159
Requested actions
  • data_selection
  • skim_selection
  • descriptive_vaxdate
  • match_seqtrialcox_pfizer
  • merge_seqtrialcox_pfizer
  • match_seqtrialcox_moderna
  • merge_seqtrialcox_moderna
  • combine_match
  • model_seqtrialcox_pfizer_postest_none
  • report_seqtrialcox_pfizer_postest_none
  • model_seqtrialcox_pfizer_postest_vax12_type-az-az
  • report_seqtrialcox_pfizer_postest_vax12_type-az-az
  • model_seqtrialcox_pfizer_postest_vax12_type-pfizer-pfizer
  • report_seqtrialcox_pfizer_postest_vax12_type-pfizer-pfizer
  • model_seqtrialcox_pfizer_covidadmittedproxy1_none
  • report_seqtrialcox_pfizer_covidadmittedproxy1_none
  • model_seqtrialcox_pfizer_covidadmittedproxy1_vax12_type-az-az
  • report_seqtrialcox_pfizer_covidadmittedproxy1_vax12_type-az-az
  • model_seqtrialcox_pfizer_covidadmittedproxy1_vax12_type-pfizer-pfizer
  • report_seqtrialcox_pfizer_covidadmittedproxy1_vax12_type-pfizer-pfizer
  • model_seqtrialcox_pfizer_covidadmitted_none
  • report_seqtrialcox_pfizer_covidadmitted_none
  • model_seqtrialcox_pfizer_covidadmitted_vax12_type-az-az
  • report_seqtrialcox_pfizer_covidadmitted_vax12_type-az-az
  • model_seqtrialcox_pfizer_covidadmitted_vax12_type-pfizer-pfizer
  • report_seqtrialcox_pfizer_covidadmitted_vax12_type-pfizer-pfizer

Code comparison

Compare the code used in this job request