Job request: 5748
- Organisation:
- Bennett Institute
- Workspace:
- booster-effectiveness_main
- ID:
- 2uzzf3ftmbzz57md
This page shows the technical details of what happened when the authorised researcher Will Hulme requested one or more actions to be run against real patient data within a secure environment.
By cross-referencing the list of jobs with the pipeline section below, you can infer what security level the outputs were written to.
The output security levels are:
-
highly_sensitive
- Researchers can never directly view these outputs
- Researchers can only request code is run against them
-
moderately_sensitive
- Can be viewed by an approved researcher by logging into a highly secure environment
- These are the only outputs that can be requested for public release via a controlled output review service.
Jobs
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- Job identifier:
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gl3x56crhj2oagal - Error:
- nonzero_exit: Job exited with error code 1
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uod766weijrm4mqg - Error:
- nonzero_exit: Job exited with error code 2
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- Job identifier:
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uuuzzv2zn2kffsvb - Error:
- nonzero_exit: Job exited with error code 1
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- Job identifier:
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pzr672vjjdasiojb - Error:
- nonzero_exit: Job exited with error code 1
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- Job identifier:
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ve2vd7drf3ixcezf - Error:
- Internal error
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- Job identifier:
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uqxikcjaamv7hdup - Error:
- nonzero_exit: Job exited with error code 137: likely means it ran out of memory
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- Job identifier:
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k4ewbztn3trz6oea - Error:
- nonzero_exit: Job exited with error code 1
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- Job identifier:
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axvyf2stmegnfo25 - Error:
- nonzero_exit: Job exited with error code 1
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- Job identifier:
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3tzpozapqymud43k - Error:
- nonzero_exit: Job exited with error code 1
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- Job identifier:
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l6vx5c436ghklosj - Error:
- nonzero_exit: Job exited with error code 137: likely means it ran out of memory
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- Job identifier:
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pqbufrqwjtw5nuaw - Error:
- nonzero_exit: Job exited with error code 1
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eghckvgwhetmhjqt
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5yn3anbudymh4aei
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knh754niywks7bst - Error:
- nonzero_exit: Job exited with error code 1
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265oaqdqanlbzgd4
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- Job identifier:
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ryu4q4jaokn3drhz
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- Job identifier:
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sjyjdqgwbh3aoprs - Error:
- Failed to start docker container: Command '['docker', 'run', '--init', '--detach', '--label', 'job-runner', '--name', 'os-job-sjyjdqgwbh3aoprs', '--network', 'none', '--volume', 'os-volume-sjyjdqgwbh3aoprs:/workspace', '--label', 'jobrunner-local', '--label', 'workspace=booster-effectiveness_main', '--label', 'action=model_seqtrialcox_pfizer_postest_age65plus-TRUE', '--env', 'OPENSAFELY_BACKEND', 'ghcr.io/opensafely-core/r:latest', 'analysis/model_seqtrialcox.R', 'pfizer', 'postest', 'age65plus-TRUE']' returned non-zero exit status 125.
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- Job identifier:
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kf23anpf7mcyvy7a - Error:
- nonzero_exit: Job exited with error code 1
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- Job identifier:
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f3q6un5jbg4vwct4 - Error:
- Failed to start docker container: Command '['docker', 'run', '--init', '--detach', '--label', 'job-runner', '--name', 'os-job-f3q6un5jbg4vwct4', '--network', 'none', '--volume', 'os-volume-f3q6un5jbg4vwct4:/workspace', '--label', 'jobrunner-local', '--label', 'workspace=booster-effectiveness_main', '--label', 'action=model_seqtrialcox_moderna_covidadmitted_cev-TRUE', '--env', 'OPENSAFELY_BACKEND', 'ghcr.io/opensafely-core/r:latest', 'analysis/model_seqtrialcox.R', 'moderna', 'covidadmitted', 'cev-TRUE']' returned non-zero exit status 125.
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- Job identifier:
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k3x2yqdwnz45tmmu
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3ag5nbe6ardmjarf
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- Job identifier:
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yzn6ubkap6iqhsgb
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- Job identifier:
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umzrwi4vvfhj4poa - Error:
- nonzero_exit: Job exited with error code 1
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- Job identifier:
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6s7r42wumcqzuhpo
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- Job identifier:
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gj4h23ac3q666ofe - Error:
- nonzero_exit: Job exited with error code 1
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- Job identifier:
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ljozx5inacscwitx
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- Job identifier:
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q35sdqfo54ggqm4d - Error:
- nonzero_exit: Job exited with error code 1
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- Job identifier:
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uaokbnxk2lv4cbtj - Error:
- nonzero_exit: Job exited with error code 1
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- Job identifier:
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ymg7f33vzqoif7st
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- Job identifier:
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5kznmyp5zavgqs5x - Error:
- nonzero_exit: Job exited with error code 137: likely means it ran out of memory
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- Job identifier:
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h3olgjpreslg2lca - Error:
- nonzero_exit: Job exited with error code 1
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- Job identifier:
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crvmzfd3irf3z3be
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- Job identifier:
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jpgh35bqjr4rvllh - Error:
- nonzero_exit: Job exited with error code 1
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- Job identifier:
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vhz7gxo6jk4jwm7n - Error:
- nonzero_exit: Job exited with error code 1
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- Job identifier:
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7pckxai5b42yl6wf
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sppqlll6r3fro7fn
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qj5bqg74znct5ptl
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- Job identifier:
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qpswkvsuufkhy5co - Error:
- nonzero_exit: Job exited with error code 1
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- Job identifier:
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sm2p3vmzz32cwtnd
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baad2u5rtpjw6tw7
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3sbzrvxownomq4r3
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uol4plh25rpcocla
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zdcledc26dn7vt3v
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hnbrme5i7kegzi5i
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fvcvvw3hht5retds
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fspvbhzauvtwv4g2
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bkttkawvvcj3f55s
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423oyk7cs7llxo33
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- Job identifier:
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srnmakb7e7ncjhmb
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- Job identifier:
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5v5yrrytvj6qbbsw - Error:
- dependency_failed: Not starting as dependency failed
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- Job identifier:
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nznfxlgcuiectkmr - Error:
- dependency_failed: Not starting as dependency failed
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- Job identifier:
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5u7ifbfdfl3mwi4o - Error:
- Out of disk space, please try again later
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- Job identifier:
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uuk7w4goiipdkcj5 - Error:
- dependency_failed: Not starting as dependency failed
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- Job identifier:
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llwmndg5ygafl3ht - Error:
- dependency_failed: Not starting as dependency failed
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- Job identifier:
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ygnv42kcuannapkv - Error:
- dependency_failed: Not starting as dependency failed
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- Job identifier:
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w2wl4rrcnchmfart - Error:
- dependency_failed: Not starting as dependency failed
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- Job identifier:
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rrsmagujes36ekbc - Error:
- dependency_failed: Not starting as dependency failed
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- Job identifier:
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3zxu5vbwmzqjls7p - Error:
- Out of disk space, please try again later
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- Job identifier:
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wj56rtznn5mdhbdk - Error:
- dependency_failed: Not starting as dependency failed
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- Job identifier:
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7xduewfboqeewnyv - Error:
- dependency_failed: Not starting as dependency failed
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- Job identifier:
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vayrxpuwgdafe72b - Error:
- dependency_failed: Not starting as dependency failed
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- Job identifier:
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vsgntrmldsqzynpl - Error:
- dependency_failed: Not starting as dependency failed
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- Job identifier:
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bprkijxm7w2hdng6 - Error:
- dependency_failed: Not starting as dependency failed
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- Job identifier:
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nnp2hfffsynzutvn - Error:
- Out of disk space, please try again later
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- Job identifier:
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gfthb523avzyh2nv - Error:
- dependency_failed: Not starting as dependency failed
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- Job identifier:
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rsaeskifk2ikeq2u - Error:
- dependency_failed: Not starting as dependency failed
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- Job identifier:
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hewe3dz5g7f2spur - Error:
- dependency_failed: Not starting as dependency failed
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- Job identifier:
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xythj7xvpioz464y - Error:
- dependency_failed: Not starting as dependency failed
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- Job identifier:
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hmclviqf6pzk7xid - Error:
- dependency_failed: Not starting as dependency failed
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- Job identifier:
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aeozx6vg75qenvyt - Error:
- dependency_failed: Not starting as dependency failed
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- Job identifier:
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at7kcndseeafqfy3 - Error:
- dependency_failed: Not starting as dependency failed
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- Job identifier:
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hdyyvwkhn6nhf6kg - Error:
- dependency_failed: Not starting as dependency failed
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- Job identifier:
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kyydw4ud3rdqsdlo - Error:
- dependency_failed: Not starting as dependency failed
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- Job identifier:
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35bbcochqn2c6t5g - Error:
- dependency_failed: Not starting as dependency failed
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- Job identifier:
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tmwxozehazglixvo - Error:
- dependency_failed: Not starting as dependency failed
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- Job identifier:
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dgenvl6b3xbhwasa - Error:
- dependency_failed: Not starting as dependency failed
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- Job identifier:
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fi2f6kswopbioj7l - Error:
- dependency_failed: Not starting as dependency failed
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- Job identifier:
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xif2ffnu4n35jov5 - Error:
- dependency_failed: Not starting as dependency failed
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- Job identifier:
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qaffns4pcrhl72up - Error:
- dependency_failed: Not starting as dependency failed
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- Job identifier:
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svwr6e7mfybuagc5 - Error:
- dependency_failed: Not starting as dependency failed
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- Job identifier:
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3fpmhtmaf6qeo7pk - Error:
- dependency_failed: Not starting as dependency failed
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- Job identifier:
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j33dymwzboragaek - Error:
- Out of disk space, please try again later
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- Job identifier:
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lq4e4j4u4uzhrkig - Error:
- Out of disk space, please try again later
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- Job identifier:
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tnylrn4j4ma2uzgv - Error:
- dependency_failed: Not starting as dependency failed
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- Job identifier:
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ntniisawwgd3dw5g - Error:
- dependency_failed: Not starting as dependency failed
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- Job identifier:
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3lfodayszuqjs673 - Error:
- dependency_failed: Not starting as dependency failed
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- Job identifier:
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f2js5d5qwnrkjs2r - Error:
- Out of disk space, please try again later
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- Job identifier:
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7mwz67umiw5gvcqr - Error:
- dependency_failed: Not starting as dependency failed
Pipeline
Show project.yaml
This file is too large to render, try viewing it on GitHub
.
Timeline
-
Created:
-
Started:
-
Finished:
-
Runtime: 68:26:08
These timestamps are generated and stored using the UTC timezone on the TPP backend.
Job request
- Status
-
Failed
- Backend
- TPP
- Workspace
- booster-effectiveness_main
- Requested by
- Will Hulme
- Branch
- main
- Force run dependencies
- No
- Git commit hash
- a6277c3
- Requested actions
-
-
merge_seqtrialcox_pfizer -
merge_seqtrialcox_moderna -
combine_match -
model_seqtrialcox_pfizer_postest_cev-FALSE -
report_seqtrialcox_pfizer_postest_cev-FALSE -
model_seqtrialcox_pfizer_postest_cev-TRUE -
report_seqtrialcox_pfizer_postest_cev-TRUE -
model_seqtrialcox_pfizer_covidemergency_cev-FALSE -
report_seqtrialcox_pfizer_covidemergency_cev-FALSE -
model_seqtrialcox_pfizer_covidemergency_cev-TRUE -
report_seqtrialcox_pfizer_covidemergency_cev-TRUE -
model_seqtrialcox_pfizer_covidadmittedproxy1_cev-FALSE -
report_seqtrialcox_pfizer_covidadmittedproxy1_cev-FALSE -
model_seqtrialcox_pfizer_covidadmittedproxy1_cev-TRUE -
report_seqtrialcox_pfizer_covidadmittedproxy1_cev-TRUE -
model_seqtrialcox_pfizer_covidadmitted_cev-FALSE -
report_seqtrialcox_pfizer_covidadmitted_cev-FALSE -
model_seqtrialcox_pfizer_covidadmitted_cev-TRUE -
report_seqtrialcox_pfizer_covidadmitted_cev-TRUE -
model_seqtrialcox_pfizer_coviddeath_cev-FALSE -
report_seqtrialcox_pfizer_coviddeath_cev-FALSE -
model_seqtrialcox_pfizer_coviddeath_cev-TRUE -
report_seqtrialcox_pfizer_coviddeath_cev-TRUE -
model_seqtrialcox_pfizer_postest_age65plus-FALSE -
report_seqtrialcox_pfizer_postest_age65plus-FALSE -
model_seqtrialcox_pfizer_postest_age65plus-TRUE -
report_seqtrialcox_pfizer_postest_age65plus-TRUE -
model_seqtrialcox_pfizer_covidemergency_age65plus-FALSE -
report_seqtrialcox_pfizer_covidemergency_age65plus-FALSE -
model_seqtrialcox_pfizer_covidemergency_age65plus-TRUE -
report_seqtrialcox_pfizer_covidemergency_age65plus-TRUE -
model_seqtrialcox_pfizer_covidadmittedproxy1_age65plus-FALSE -
report_seqtrialcox_pfizer_covidadmittedproxy1_age65plus-FALSE -
model_seqtrialcox_pfizer_covidadmittedproxy1_age65plus-TRUE -
report_seqtrialcox_pfizer_covidadmittedproxy1_age65plus-TRUE -
model_seqtrialcox_pfizer_covidadmitted_age65plus-FALSE -
report_seqtrialcox_pfizer_covidadmitted_age65plus-FALSE -
model_seqtrialcox_pfizer_covidadmitted_age65plus-TRUE -
report_seqtrialcox_pfizer_covidadmitted_age65plus-TRUE -
model_seqtrialcox_pfizer_coviddeath_age65plus-FALSE -
report_seqtrialcox_pfizer_coviddeath_age65plus-FALSE -
model_seqtrialcox_pfizer_coviddeath_age65plus-TRUE -
report_seqtrialcox_pfizer_coviddeath_age65plus-TRUE -
model_seqtrialcox_moderna_postest_cev-FALSE -
report_seqtrialcox_moderna_postest_cev-FALSE -
model_seqtrialcox_moderna_postest_cev-TRUE -
report_seqtrialcox_moderna_postest_cev-TRUE -
model_seqtrialcox_moderna_covidemergency_cev-FALSE -
report_seqtrialcox_moderna_covidemergency_cev-FALSE -
model_seqtrialcox_moderna_covidemergency_cev-TRUE -
report_seqtrialcox_moderna_covidemergency_cev-TRUE -
model_seqtrialcox_moderna_covidadmittedproxy1_cev-FALSE -
report_seqtrialcox_moderna_covidadmittedproxy1_cev-FALSE -
model_seqtrialcox_moderna_covidadmittedproxy1_cev-TRUE -
report_seqtrialcox_moderna_covidadmittedproxy1_cev-TRUE -
model_seqtrialcox_moderna_covidadmitted_cev-FALSE -
report_seqtrialcox_moderna_covidadmitted_cev-FALSE -
model_seqtrialcox_moderna_covidadmitted_cev-TRUE -
report_seqtrialcox_moderna_covidadmitted_cev-TRUE -
model_seqtrialcox_moderna_coviddeath_cev-FALSE -
report_seqtrialcox_moderna_coviddeath_cev-FALSE -
model_seqtrialcox_moderna_coviddeath_cev-TRUE -
report_seqtrialcox_moderna_coviddeath_cev-TRUE -
model_seqtrialcox_moderna_postest_age65plus-FALSE -
report_seqtrialcox_moderna_postest_age65plus-FALSE -
model_seqtrialcox_moderna_postest_age65plus-TRUE -
report_seqtrialcox_moderna_postest_age65plus-TRUE -
model_seqtrialcox_moderna_covidemergency_age65plus-FALSE -
report_seqtrialcox_moderna_covidemergency_age65plus-FALSE -
model_seqtrialcox_moderna_covidemergency_age65plus-TRUE -
report_seqtrialcox_moderna_covidemergency_age65plus-TRUE -
model_seqtrialcox_moderna_covidadmittedproxy1_age65plus-FALSE -
report_seqtrialcox_moderna_covidadmittedproxy1_age65plus-FALSE -
model_seqtrialcox_moderna_covidadmittedproxy1_age65plus-TRUE -
report_seqtrialcox_moderna_covidadmittedproxy1_age65plus-TRUE -
model_seqtrialcox_moderna_covidadmitted_age65plus-FALSE -
report_seqtrialcox_moderna_covidadmitted_age65plus-FALSE -
model_seqtrialcox_moderna_covidadmitted_age65plus-TRUE -
report_seqtrialcox_moderna_covidadmitted_age65plus-TRUE -
model_seqtrialcox_moderna_coviddeath_age65plus-FALSE -
report_seqtrialcox_moderna_coviddeath_age65plus-FALSE -
model_seqtrialcox_moderna_coviddeath_age65plus-TRUE -
report_seqtrialcox_moderna_coviddeath_age65plus-TRUE -
combine_model_none -
combine_model_vax12_type -
combine_model_cev -
combine_model_age65plus -
manuscript_objects
-
Code comparison
Compare the code used in this job request