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Job request: 5921

Organisation:
Bennett Institute
Workspace:
booster-effectiveness_main
ID:
o5vxezqx3vynzblf
View repo View project.yaml

This page shows the technical details of what happened when the authorised researcher Will Hulme requested one or more actions to be run against real patient data within a secure environment.

By cross-referencing the list of jobs with the pipeline section below, you can infer what security level the outputs were written to.

The output security levels are:

  • highly_sensitive
    • Researchers can never directly view these outputs
    • Researchers can only request code is run against them
  • moderately_sensitive
    • Can be viewed by an approved researcher by logging into a highly secure environment
    • These are the only outputs that can be requested for public release via a controlled output review service.

Jobs

  • Action:
    extract
    Status:
    Failed
    Job identifier:
    t4ss4fbzvyeh3mfk
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    report_seqtrialcox_pfizer_noncovidadmitted_none
    Status:
    Failed
    Job identifier:
    hpyvhmslbfue5li6
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    data_selection
    Status:
    Failed
    Job identifier:
    rbllki4d3yqxevvb
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    merge_seqtrialcox_moderna
    Status:
    Failed
    Job identifier:
    gfz4x6w5ilop5flo
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    model_seqtrialcox_pfizer_covidadmitted_none
    Status:
    Failed
    Job identifier:
    6h32hx4x3wl4dejv
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    model_seqtrialcox_pfizer_noncoviddeath_none
    Status:
    Failed
    Job identifier:
    hx6uxlqhegq5yyby
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    report_seqtrialcox_pfizer_noncoviddeath_none
    Status:
    Failed
    Job identifier:
    q63pkpvp3susmx3m
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    skim_process
    Status:
    Failed
    Job identifier:
    7magy5pzcibixv4t
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    match_seqtrialcox_moderna
    Status:
    Failed
    Job identifier:
    etuqspthurux6bcu
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    match_seqtrialcox_pfizer
    Status:
    Failed
    Job identifier:
    hjabyd7uttqnhcps
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    report_seqtrialcox_pfizer_covidadmitted_none
    Status:
    Failed
    Job identifier:
    ryduu76vukkle5co
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    report_seqtrialcox_pfizer_covidadmittedproxy1_none
    Status:
    Failed
    Job identifier:
    jfo6bbvh4pt3tiz2
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    report_seqtrialcox_pfizer_coviddeath_none
    Status:
    Failed
    Job identifier:
    5z4op3dstd55vn4o
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    report_seqtrialcox_pfizer_covidemergency_none
    Status:
    Failed
    Job identifier:
    jimsvd76y4o7vf7k
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    report_seqtrialcox_pfizer_postest_none
    Status:
    Failed
    Job identifier:
    em7vafi6sc3eeo3k
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    merge_seqtrialcox_pfizer
    Status:
    Failed
    Job identifier:
    t3noanqmnxiijcn4
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    model_seqtrialcox_pfizer_covidadmittedproxy1_none
    Status:
    Failed
    Job identifier:
    6axdtdkl7h3i5jwo
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    model_seqtrialcox_pfizer_coviddeath_none
    Status:
    Failed
    Job identifier:
    mfiswvth2se6q7bj
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    cohort_report
    Status:
    Failed
    Job identifier:
    slvrzbr7icivbfc5
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    combine_match
    Status:
    Failed
    Job identifier:
    vmttaqnqezngsf6v
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    data_process
    Status:
    Failed
    Job identifier:
    bm3yq7k4l7y44qs4
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    data_process_long
    Status:
    Failed
    Job identifier:
    mfrgddwpnf35s5je
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    model_seqtrialcox_pfizer_covidemergency_none
    Status:
    Failed
    Job identifier:
    eyzsna6or6wih7tl
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    model_seqtrialcox_pfizer_postest_none
    Status:
    Failed
    Job identifier:
    pta7gpppm6b5pe6z
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    descriptive_table1
    Status:
    Failed
    Job identifier:
    gi4zlypb7vkmyqcz
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    model_seqtrialcox_pfizer_noncovidadmitted_none
    Status:
    Failed
    Job identifier:
    rpifrfl7dsj5di3w
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    descriptive_vaxdate
    Status:
    Failed
    Job identifier:
    h7jojge26kngfn7b
    Error:
    cancelled_by_user: Cancelled by user

Pipeline

Show project.yaml
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Timeline

  • Created:

  • Started:

  • Finished:

  • Runtime: 00:01:43

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job request

Status
Failed
Backend
TPP
Workspace
booster-effectiveness_main
Requested by
Will Hulme
Branch
main
Force run dependencies
No
Git commit hash
ada033e
Requested actions
  • extract
  • data_process
  • skim_process
  • data_process_long
  • data_selection
  • cohort_report
  • descriptive_table1
  • descriptive_vaxdate
  • match_seqtrialcox_pfizer
  • merge_seqtrialcox_pfizer
  • match_seqtrialcox_moderna
  • merge_seqtrialcox_moderna
  • combine_match
  • model_seqtrialcox_pfizer_postest_none
  • report_seqtrialcox_pfizer_postest_none
  • model_seqtrialcox_pfizer_covidemergency_none
  • report_seqtrialcox_pfizer_covidemergency_none
  • model_seqtrialcox_pfizer_covidadmittedproxy1_none
  • report_seqtrialcox_pfizer_covidadmittedproxy1_none
  • model_seqtrialcox_pfizer_covidadmitted_none
  • report_seqtrialcox_pfizer_covidadmitted_none
  • model_seqtrialcox_pfizer_noncovidadmitted_none
  • report_seqtrialcox_pfizer_noncovidadmitted_none
  • model_seqtrialcox_pfizer_coviddeath_none
  • report_seqtrialcox_pfizer_coviddeath_none
  • model_seqtrialcox_pfizer_noncoviddeath_none
  • report_seqtrialcox_pfizer_noncoviddeath_none

Code comparison

Compare the code used in this job request