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Job request: 5931

Organisation:
Bennett Institute
Workspace:
booster-effectiveness_main
ID:
6hxbp5eyrmivntcm
View repo View project.yaml

This page shows the technical details of what happened when the authorised researcher Will Hulme requested one or more actions to be run against real patient data within a secure environment.

By cross-referencing the list of jobs with the pipeline section below, you can infer what security level the outputs were written to.

The output security levels are:

  • highly_sensitive
    • Researchers can never directly view these outputs
    • Researchers can only request code is run against them
  • moderately_sensitive
    • Can be viewed by an approved researcher by logging into a highly secure environment
    • These are the only outputs that can be requested for public release via a controlled output review service.

Jobs

  • Action:
    extract
    Status:
    Failed
    Job identifier:
    wlgrygxe57n63r3v
    Error:
    Internal error
  • Action:
    model_seqtrialcox_pfizer_covidadmittedproxy1_none
    Status:
    Failed
    Job identifier:
    3urwtm26osudh2bd
    Error:
    Internal error
  • Action:
    model_seqtrialcox_pfizer_postest_none
    Status:
    Failed
    Job identifier:
    q7dkb7r3u5jjg3he
    Error:
    Internal error
  • Action:
    report_seqtrialcox_pfizer_coviddeath_none
    Status:
    Failed
    Job identifier:
    twgn4rctr64uetzu
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    model_seqtrialcox_pfizer_noncovidadmitted_none
    Status:
    Failed
    Job identifier:
    sayayrm5f6ssiy3g
    Error:
    Internal error
  • Action:
    combine_match
    Status:
    Failed
    Job identifier:
    yxpe3o3j7wemawxv
    Error:
    Internal error
  • Action:
    data_process
    Status:
    Failed
    Job identifier:
    fbidqoml5ou33rut
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    data_process_long
    Status:
    Failed
    Job identifier:
    ht7ikd5lrfonhk66
    Error:
    Internal error
  • Action:
    data_selection
    Status:
    Failed
    Job identifier:
    fdq7dazyshyjp5rf
    Error:
    Internal error
  • Action:
    descriptive_table1
    Status:
    Failed
    Job identifier:
    qvqiormpuhj7at73
    Error:
    Internal error
  • Action:
    descriptive_vaxdate
    Status:
    Failed
    Job identifier:
    whes5kj7aekw2752
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    match_seqtrialcox_moderna
    Status:
    Failed
    Job identifier:
    bdpiah25ycpg2fgp
    Error:
    Internal error
  • Action:
    match_seqtrialcox_pfizer
    Status:
    Failed
    Job identifier:
    temwmjffro4zlyws
    Error:
    Internal error
  • Action:
    merge_seqtrialcox_pfizer
    Status:
    Failed
    Job identifier:
    6ewf3kds3qkcdu3y
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    report_seqtrialcox_pfizer_covidemergency_none
    Status:
    Failed
    Job identifier:
    lxol3k2utzsjjh2x
    Error:
    Internal error
  • Action:
    report_seqtrialcox_pfizer_noncoviddeath_none
    Status:
    Failed
    Job identifier:
    e37uqntackkz7xmf
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    model_seqtrialcox_pfizer_covidadmitted_none
    Status:
    Failed
    Job identifier:
    fbfhskylcoirvuno
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    model_seqtrialcox_pfizer_coviddeath_none
    Status:
    Failed
    Job identifier:
    n4ojgxzjcdkpitu7
    Error:
    Internal error
  • Action:
    model_seqtrialcox_pfizer_covidemergency_none
    Status:
    Failed
    Job identifier:
    nrsqvvn6abxgspun
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    model_seqtrialcox_pfizer_noncoviddeath_none
    Status:
    Failed
    Job identifier:
    m6ttf35u3mp2viw4
    Error:
    Internal error
  • Action:
    report_seqtrialcox_pfizer_covidadmitted_none
    Status:
    Failed
    Job identifier:
    34essoqu4sbz2uu5
    Error:
    Internal error
  • Action:
    report_seqtrialcox_pfizer_covidadmittedproxy1_none
    Status:
    Failed
    Job identifier:
    fulr5lc2s3h4sfct
    Error:
    Internal error
  • Action:
    report_seqtrialcox_pfizer_postest_none
    Status:
    Failed
    Job identifier:
    btijmjitx2lqco37
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    skim_process
    Status:
    Failed
    Job identifier:
    y3vcu25rjympmban
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    skim_selection
    Status:
    Failed
    Job identifier:
    ionbwgof7zcftf6d
    Error:
    Internal error
  • Action:
    merge_seqtrialcox_moderna
    Status:
    Failed
    Job identifier:
    4iknr7c5weygouhu
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    report_seqtrialcox_pfizer_noncovidadmitted_none
    Status:
    Failed
    Job identifier:
    sm7ka4llbcmymay3
    Error:
    Internal error

Pipeline

Show project.yaml
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Timeline

  • Created:

  • Started:

  • Finished:

  • Runtime: 03:00:08

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job request

Status
Failed
Backend
TPP
Workspace
booster-effectiveness_main
Requested by
Will Hulme
Branch
main
Force run dependencies
No
Git commit hash
ada033e
Requested actions
  • extract
  • data_process
  • skim_process
  • data_process_long
  • data_selection
  • skim_selection
  • descriptive_table1
  • descriptive_vaxdate
  • match_seqtrialcox_pfizer
  • merge_seqtrialcox_pfizer
  • match_seqtrialcox_moderna
  • merge_seqtrialcox_moderna
  • combine_match
  • model_seqtrialcox_pfizer_postest_none
  • report_seqtrialcox_pfizer_postest_none
  • model_seqtrialcox_pfizer_covidemergency_none
  • report_seqtrialcox_pfizer_covidemergency_none
  • model_seqtrialcox_pfizer_covidadmittedproxy1_none
  • report_seqtrialcox_pfizer_covidadmittedproxy1_none
  • model_seqtrialcox_pfizer_covidadmitted_none
  • report_seqtrialcox_pfizer_covidadmitted_none
  • model_seqtrialcox_pfizer_noncovidadmitted_none
  • report_seqtrialcox_pfizer_noncovidadmitted_none
  • model_seqtrialcox_pfizer_coviddeath_none
  • report_seqtrialcox_pfizer_coviddeath_none
  • model_seqtrialcox_pfizer_noncoviddeath_none
  • report_seqtrialcox_pfizer_noncoviddeath_none

Code comparison

Compare the code used in this job request