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Job request: 5464

Organisation:
Bennett Institute
Workspace:
booster-effectiveness_matching
ID:
yuay46noezbupzkz
View repo View project.yaml

This page shows the technical details of what happened when the authorised researcher Will Hulme requested one or more actions to be run against real patient data within a secure environment.

By cross-referencing the list of jobs with the pipeline section below, you can infer what security level the outputs were written to.

The output security levels are:

  • highly_sensitive
    • Researchers can never directly view these outputs
    • Researchers can only request code is run against them
  • moderately_sensitive
    • Can be viewed by an approved researcher by logging into a highly secure environment
    • These are the only outputs that can be requested for public release via a controlled output review service.

Jobs

  • Action:
    extract
    Status:
    Status: Succeeded
    Job identifier:
    4tpbu6kv3fvptz34
  • Action:
    data_process
    Status:
    Status: Succeeded
    Job identifier:
    tebucbns2bfte7lm
  • Action:
    data_selection
    Status:
    Status: Succeeded
    Job identifier:
    rxxef76singjzusl
  • Action:
    skim_process
    Status:
    Status: Succeeded
    Job identifier:
    xge4c5db6nrrps3c
  • Action:
    data_process_long
    Status:
    Status: Succeeded
    Job identifier:
    xccnkzgnt4s7eesg
  • Action:
    match_seqtrialcox_moderna
    Status:
    Status: Failed
    Job identifier:
    azy5tuu5yde5c7us
    Error:
    nonzero_exit: Job exited with error code 137: likely means it ran out of memory
  • Action:
    match_seqtrialcox_pfizer
    Status:
    Status: Failed
    Job identifier:
    icrcg36tzlcl7x6k
    Error:
    nonzero_exit: Job exited with error code 137: likely means it ran out of memory
  • Action:
    combine_match
    Status:
    Status: Failed
    Job identifier:
    vklfuxis3ll2gw3l
    Error:
    dependency_failed: Not starting as dependency failed

Pipeline

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Timeline

  • Created:

  • Started:

  • Finished:

  • Runtime: 05:25:39

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job request

Status
Failed
Backend
TPP
Workspace
booster-effectiveness_matching
Requested by
Will Hulme
Branch
matching
Force run dependencies
No
Git commit hash
dbd43bd
Requested actions
  • extract
  • data_process
  • skim_process
  • data_process_long
  • data_selection
  • match_seqtrialcox_pfizer
  • match_seqtrialcox_moderna
  • combine_match

Code comparison

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  • No previous job request available for comparison