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Job request: 13375

Organisation:
Bennett Institute
Workspace:
vaccine-effectiveness-3dose
ID:
4gzcmkkyq64kepec
View repo View project.yaml

This page shows the technical details of what happened when the authorised researcher Elsie Horne requested one or more actions to be run against real patient data in the project, within a secure environment.

By cross-referencing the list of jobs with the pipeline section below, you can infer what security level various outputs were written to. Researchers can never directly view outputs marked as highly_sensitive ; they can only request that code runs against them. Outputs marked as moderately_sensitive can be viewed by an approved researcher by logging into a highly secure environment. Only outputs marked as moderately_sensitive can be requested for release to the public, via a controlled output review service.

Jobs

  • Action:
    process_controlfinal_mrna
    Status:
    Status: Succeeded
    Job identifier:
    ynleiwignjta3nus
  • Action:
    design
    Status:
    Status: Succeeded
    Job identifier:
    s3cjto2ndd43nv5t
  • Action:
    extract_covidtests_mrna_treated
    Status:
    Status: Failed
    Job identifier:
    3czp2tn26vumaafc
    Error:
    nonzero_exit: Job exited with error code 5: Something went wrong with the database, please contact tech support
  • Action:
    extract_covidtests_mrna_control
    Status:
    Status: Failed
    Job identifier:
    4cxkz3kzvno4nldt
    Error:
    nonzero_exit: Job exited with error code 5: Something went wrong with the database, please contact tech support
  • Action:
    process_covidtests_mrna
    Status:
    Status: Failed
    Job identifier:
    zshp5guvieqrcmky
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    summarise_covidtests_mrna
    Status:
    Status: Failed
    Job identifier:
    k5mzqj7knhunre3t
    Error:
    dependency_failed: Not starting as dependency failed

Pipeline

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Timeline

  • Created:

  • Started:

  • Finished:

  • Runtime: 00:45:11

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job request

Status
Failed
Backend
TPP
Workspace
vaccine-effectiveness-3dose
Requested by
Elsie Horne
Branch
main
Force run dependencies
No
Git commit hash
b510d67
Requested actions
  • design
  • process_controlfinal_mrna
  • extract_covidtests_mrna_treated
  • extract_covidtests_mrna_control
  • process_covidtests_mrna
  • summarise_covidtests_mrna

Code comparison

Compare the code used in this job request