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Job request: 22820

Organisation:
Bennett Institute
Workspace:
prophy_effects_sotro_molnup
ID:
zc4zr3mysf6nywbe
View repo View project.yaml

This page shows the technical details of what happened when the authorised researcher Qing Wen requested one or more actions to be run against real patient data within a secure environment.

By cross-referencing the list of jobs with the pipeline section below, you can infer what security level the outputs were written to.

The output security levels are:

  • highly_sensitive
    • Researchers can never directly view these outputs
    • Researchers can only request code is run against them
  • moderately_sensitive
    • Can be viewed by an approved researcher by logging into a highly secure environment
    • These are the only outputs that can be requested for public release via a controlled output review service.

Jobs

  • Action:
    gen_dataset_table
    Status:
    Status: Failed
    Job identifier:
    zt5dnnmpetusc6se
    Error:
    nonzero_exit: Job exited with an error

Pipeline

Show project.yaml 
version: '3.0'

# Ignore this`expectation` block. It is required but not used, and will be removed in future versions.
expectations:
  population_size: 5000

actions:
  # generate_dataset:
  #   run: ehrql:v1 generate-dataset analysis/dataset_definition.py --output output/dataset.csv.gz
  #   outputs:
  #     highly_sensitive:
  #       dataset: output/dataset.csv.gz

  gen_dataset_table:
    run: ehrql:v1 generate-dataset analysis/dataset_definition.py --output output/data/dataset_table.csv.gz
    outputs:
      highly_sensitive:
        cohort: output/data/dataset_table.csv.gz

  prep_descrip:
   run: stata-mp:analysis/data_prep_descrip.do
   needs: [gen_dataset_table]
   outputs:
      moderately_sensitive:
        log: logs/data_preparation.log
      highly_sensitive:
        data1: output/main.dta
        data2: output/sensitivity.dta

Timeline

  • Created:

  • Started:

  • Finished:

  • Runtime: 00:00:08

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job request

Status
Failed
Backend
TPP
Workspace
prophy_effects_sotro_molnup
Requested by
Qing Wen
Branch
main
Force run dependencies
No
Git commit hash
4e67c9d
Requested actions
  • gen_dataset_table

Code comparison

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