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Job request: 1182

Organisation:
Bennett Institute
Workspace:
covid-vaccine-effectiveness-research_speed-up
ID:
un5gknkqx4ru4r7l
View repo View project.yaml

This page shows the technical details of what happened when the authorised researcher Will Hulme requested one or more actions to be run against real patient data within a secure environment.

By cross-referencing the list of jobs with the pipeline section below, you can infer what security level the outputs were written to.

The output security levels are:

  • highly_sensitive
    • Researchers can never directly view these outputs
    • Researchers can only request code is run against them
  • moderately_sensitive
    • Can be viewed by an approved researcher by logging into a highly secure environment
    • These are the only outputs that can be requested for public release via a controlled output review service.

Jobs

  • Action:
    extract_all
    Status:
    Succeeded
    Job identifier:
    5vfoflaui2yzf5c2
  • Action:
    data_process_all
    Status:
    Succeeded
    Job identifier:
    7fgfvx7zw6iyrusm
  • Action:
    data_properties_all
    Status:
    Succeeded
    Job identifier:
    npjmncmlgwmwele2
  • Action:
    data_define_cohorts
    Status:
    Succeeded
    Job identifier:
    2s3b6dks5tbfy2hx
  • Action:
    data_stset_over80s
    Status:
    Succeeded
    Job identifier:
    qxtdgenw2v5hukzx
  • Action:
    data_properties_over80s_fixed
    Status:
    Succeeded
    Job identifier:
    46tw2uyza5eeqiyi
  • Action:
    data_properties_over80s_tte
    Status:
    Succeeded
    Job identifier:
    2k5asxun7llf2gps
  • Action:
    descr_table1_over80s
    Status:
    Succeeded
    Job identifier:
    ltmr2brdkx5ee2z3
  • Action:
    descr_events_over80s
    Status:
    Succeeded
    Job identifier:
    dj5yystrmnpu3rsv
  • Action:
    models_msm_over80s_any_all_dose1
    Status:
    Failed
    Job identifier:
    st3o5jaknpm6d7z7
    Error:
    nonzero_exit: Job exited with an error code
  • Action:
    models_msm_over80s_pfizer_all_dose1
    Status:
    Succeeded
    Job identifier:
    uvefqevyazfe2jxg
  • Action:
    models_msm_over80s_az_all_dose1
    Status:
    Failed
    Job identifier:
    hahqr7jwwhryu6an
    Error:
    nonzero_exit: Job exited with an error code
  • Action:
    models_msm_over80s_any_sex_dose1
    Status:
    Succeeded
    Job identifier:
    uwucsyyykhwawght
  • Action:
    models_msm_over80s_pfizer_sex_dose1
    Status:
    Succeeded
    Job identifier:
    bqtuqiltuhsonhav
  • Action:
    models_msm_over80s_az_sex_dose1
    Status:
    Succeeded
    Job identifier:
    zw4rwj7xbcbv5p2n
  • Action:
    report_msm_over80s_az_sex_dose1
    Status:
    Succeeded
    Job identifier:
    nizbvj6fkzzdcy3s
  • Action:
    report_msm_over80s_pfizer_sex_dose1
    Status:
    Succeeded
    Job identifier:
    mrazuyq5ng2hprcg
  • Action:
    report_msm_over80s_pfizer_all_dose1
    Status:
    Succeeded
    Job identifier:
    xxxhvunnucrva36k
  • Action:
    report_msm_over80s_any_sex_dose1
    Status:
    Succeeded
    Job identifier:
    jh4a3uedraedo5z3
  • Action:
    report_msm_over80s_az_all_dose1
    Status:
    Failed
    Job identifier:
    5jbn7ebcofcpiifd
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    report_msm_over80s_any_all_dose1
    Status:
    Failed
    Job identifier:
    sglxf2xc2rlac2y4
    Error:
    dependency_failed: Not starting as dependency failed

Pipeline

Show project.yaml
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Timeline

  • Created:

  • Started:

  • Finished:

  • Runtime: 25:55:22

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job request

Status
Failed
Backend
TPP
Workspace
covid-vaccine-effectiveness-research_speed-up
Requested by
Will Hulme
Branch
speed-up
Force run dependencies
No
Git commit hash
ff65744
Requested actions
  • extract_all
  • data_process_all
  • data_properties_all
  • data_define_cohorts
  • data_stset_over80s
  • data_properties_over80s_fixed
  • data_properties_over80s_tte
  • descr_table1_over80s
  • descr_events_over80s
  • models_msm_over80s_any_all_dose1
  • report_msm_over80s_any_all_dose1
  • models_msm_over80s_pfizer_all_dose1
  • report_msm_over80s_pfizer_all_dose1
  • models_msm_over80s_az_all_dose1
  • report_msm_over80s_az_all_dose1
  • models_msm_over80s_any_sex_dose1
  • report_msm_over80s_any_sex_dose1
  • models_msm_over80s_pfizer_sex_dose1
  • report_msm_over80s_pfizer_sex_dose1
  • models_msm_over80s_az_sex_dose1
  • report_msm_over80s_az_sex_dose1

Code comparison

Compare the code used in this job request

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