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Job request: 11650

Organisation:
ISARIC
Workspace:
hdruk-os-covid-paeds
ID:
rgwwsowhazatkrxj
View repo View project.yaml

This page shows the technical details of what happened when the authorised researcher James Farrell requested one or more actions to be run against real patient data within a secure environment.

By cross-referencing the list of jobs with the pipeline section below, you can infer what security level the outputs were written to.

The output security levels are:

  • highly_sensitive
    • Researchers can never directly view these outputs
    • Researchers can only request code is run against them
  • moderately_sensitive
    • Can be viewed by an approved researcher by logging into a highly secure environment
    • These are the only outputs that can be requested for public release via a controlled output review service.

Jobs

  • Action:
    process_patient_ids
    Status:
    Succeeded
    Job identifier:
    m3w7fe5hymlklpua
  • Action:
    process_testing_data
    Status:
    Succeeded
    Job identifier:
    pmaatvipippkfuyv
  • Action:
    process_outpatient_data
    Status:
    Succeeded
    Job identifier:
    madhcpfzv6jc5je3
  • Action:
    process_gp_data
    Status:
    Succeeded
    Job identifier:
    gwclwfizekph66ae
  • Action:
    process_admissions_data
    Status:
    Succeeded
    Job identifier:
    tjcaiymkp5vbov4c
  • Action:
    process_patient_data
    Status:
    Succeeded
    Job identifier:
    fsizol5sjcuma2s6
  • Action:
    create_matched_cohort
    Status:
    Succeeded
    Job identifier:
    bczkyx7d5vgqwkbq
  • Action:
    construct_yearly_cohort
    Status:
    Succeeded
    Job identifier:
    3qqycdix36ganzs4
  • Action:
    monthly_beddays_23_self_harm_and_poisoning_by_drugs_overall
    Status:
    Succeeded
    Job identifier:
    sptwcobiappsxopo
  • Action:
    monthly_admissions_20_external_causes_excluding_self_harm_overall
    Status:
    Failed
    Job identifier:
    dlfmj6zxqw3fo3uk
    Error:
    No outputs found matching patterns: - output/descriptives/healthcare_use_2019_2022/tables/monthly_admissions_20_external_causes_excluding_self_harm_overall.csv - output/descriptives/healthcare_use_2019_2022/plots/monthly_admissions_20_external_causes_excluding_self_harm_overall.jpeg
  • Action:
    monthly_admissions_19_injury_and_poisoning_excluding_poisoning_by_drugs_overall
    Status:
    Succeeded
    Job identifier:
    4qiqydsmldoztzfz
  • Action:
    monthly_admissions_23_self_harm_and_poisoning_by_drugs_overall
    Status:
    Succeeded
    Job identifier:
    7dkivpy47fr4677q
  • Action:
    monthly_beddays_20_external_causes_excluding_self_harm_overall
    Status:
    Succeeded
    Job identifier:
    p4of3dimvi3igpx6
  • Action:
    monthly_beddays_19_injury_and_poisoning_excluding_poisoning_by_drugs_overall
    Status:
    Succeeded
    Job identifier:
    wpfcyyr5lqbmjgj4
  • Action:
    summarise_datasets
    Status:
    Succeeded
    Job identifier:
    igjgetzsacrbhzjr

Pipeline

Show project.yaml
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Timeline

  • Created:

  • Started:

  • Finished:

  • Runtime: 05:31:09

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job request

Status
Failed
Backend
TPP
Workspace
hdruk-os-covid-paeds
Requested by
James Farrell
Branch
main
Force run dependencies
No
Git commit hash
a1f35fa
Requested actions
  • process_patient_ids
  • process_admissions_data
  • process_gp_data
  • process_outpatient_data
  • process_testing_data
  • process_patient_data
  • summarise_datasets
  • construct_yearly_cohort
  • monthly_admissions_19_injury_and_poisoning_excluding_poisoning_by_drugs_overall
  • monthly_admissions_20_external_causes_excluding_self_harm_overall
  • monthly_admissions_23_self_harm_and_poisoning_by_drugs_overall
  • monthly_beddays_19_injury_and_poisoning_excluding_poisoning_by_drugs_overall
  • monthly_beddays_20_external_causes_excluding_self_harm_overall
  • monthly_beddays_23_self_harm_and_poisoning_by_drugs_overall
  • create_matched_cohort

Code comparison

Compare the code used in this job request