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Job request: 12622

Organisation:
ISARIC
Workspace:
hdruk-os-covid-paeds
ID:
i2to4gcfsqp7kyaa

This page shows the technical details of what happened when the authorised researcher James Farrell requested one or more actions to be run against real patient data within a secure environment.

By cross-referencing the list of jobs with the pipeline section below, you can infer what security level the outputs were written to.

The output security levels are:

  • highly_sensitive
    • Researchers can never directly view these outputs
    • Researchers can only request code is run against them
  • moderately_sensitive
    • Can be viewed by an approved researcher by logging into a highly secure environment
    • These are the only outputs that can be requested for public release via a controlled output review service.

Jobs

  • Action:
    create_matched_cohort
    Status:
    Succeeded
    Job identifier:
    sxyhhvdsjsr53lxu
  • Action:
    weight_matched_cohort
    Status:
    Succeeded
    Job identifier:
    55s3vbzp6j2fmejp
  • Action:
    count_regression_outpatient_respiratory_poisson_uni_var
    Status:
    Succeeded
    Job identifier:
    4g3q473hfuqpswjl
  • Action:
    count_regression_gp_genitourinary_system_poisson_uni_var
    Status:
    Succeeded
    Job identifier:
    jp3rhnwcoccpssuj
  • Action:
    count_regression_admissions_06_nervous_system_poisson_uni_var
    Status:
    Succeeded
    Job identifier:
    ss243nypmksuo2vx
  • Action:
    count_regression_outpatient_all_poisson_uni_var
    Status:
    Succeeded
    Job identifier:
    t7z74rpifqcsxbtg
  • Action:
    count_regression_beddays_14_genitourinary_system_poisson_uni_var
    Status:
    Succeeded
    Job identifier:
    t3y4ul22x3tnps44
  • Action:
    count_regression_beddays_23_self_harm_and_poisoning_by_drugs_poisson_uni_var
    Status:
    Succeeded
    Job identifier:
    4kgm4e36kp62mkzv
  • Action:
    count_regression_gp_mental_disorder_poisson_uni_var
    Status:
    Succeeded
    Job identifier:
    cykt5hkk3a5fdmcm
  • Action:
    count_regression_gp_self_harm_poisson_uni_var
    Status:
    Succeeded
    Job identifier:
    ani54ngdjlrj7dib
  • Action:
    count_regression_gp_cellular_component_of_blood_poisson_uni_var
    Status:
    Succeeded
    Job identifier:
    wkh2wl2hikzwrdfm
  • Action:
    count_regression_beddays_all_poisson_uni_var
    Status:
    Succeeded
    Job identifier:
    zehyijp2n3tczovl
  • Action:
    count_regression_beddays_01_infectious_and_parasitic_diseases_poisson_uni_var
    Status:
    Succeeded
    Job identifier:
    3voqx4g7pz45z5lm
  • Action:
    count_regression_admissions_11_digestive_system_poisson_uni_var
    Status:
    Succeeded
    Job identifier:
    ltym6yrp7wsaoxe2
  • Action:
    count_regression_beddays_02_neoplasms_poisson_uni_var
    Status:
    Succeeded
    Job identifier:
    vvdx4cva3icued4y
  • Action:
    count_regression_beddays_10_respiratory_system_poisson_uni_var
    Status:
    Succeeded
    Job identifier:
    spv6i34ycqb3s2pq
  • Action:
    count_regression_gp_all_poisson_uni_var
    Status:
    Succeeded
    Job identifier:
    a2o3msvgppvlsdre
  • Action:
    count_regression_outpatient_dermatology_poisson_uni_var
    Status:
    Succeeded
    Job identifier:
    otnyzuwtvnfuufmq
  • Action:
    count_regression_outpatient_endocrinology_poisson_uni_var
    Status:
    Succeeded
    Job identifier:
    u2kcblpmf7cbg2r5
  • Action:
    count_regression_gp_endocrine_system_poisson_uni_var
    Status:
    Succeeded
    Job identifier:
    dg4c2oprm5vdiw4k
  • Action:
    count_regression_outpatient_mental_health_poisson_uni_var
    Status:
    Succeeded
    Job identifier:
    mimknszbqu5k4wry
  • Action:
    count_regression_admissions_02_neoplasms_poisson_uni_var
    Status:
    Succeeded
    Job identifier:
    poopp4jbngnx7sox
  • Action:
    count_regression_admissions_04_endocrine_nutritional_and_metabolic_poisson_uni_var
    Status:
    Succeeded
    Job identifier:
    tsz56n6gmpmhmn6l
  • Action:
    count_regression_outpatient_infectious_disease_poisson_uni_var
    Status:
    Succeeded
    Job identifier:
    cztazwkmrz7cweja
  • Action:
    count_regression_gp_cardiovascular_system_poisson_uni_var
    Status:
    Succeeded
    Job identifier:
    s5mghl7onhlnf4cv
  • Action:
    count_regression_gp_respiratory_system_poisson_uni_var
    Status:
    Succeeded
    Job identifier:
    zodweapvtv6z2sw6
  • Action:
    count_regression_gp_nervous_system_poisson_uni_var
    Status:
    Succeeded
    Job identifier:
    fpww6z2pezzmg4f4
  • Action:
    count_regression_admissions_23_self_harm_and_poisoning_by_drugs_poisson_uni_var
    Status:
    Succeeded
    Job identifier:
    37quciwwl5vd2bpt
  • Action:
    count_regression_beddays_11_digestive_system_poisson_uni_var
    Status:
    Succeeded
    Job identifier:
    h2xbq725faxvewpk
  • Action:
    count_regression_beddays_12_skin_and_subcutaneous_tissue_poisson_uni_var
    Status:
    Succeeded
    Job identifier:
    673chv2ppjszw5g7
  • Action:
    count_regression_outpatient_cardiology_poisson_uni_var
    Status:
    Succeeded
    Job identifier:
    dijbm5koiqzc2k4x
  • Action:
    count_regression_admissions_all_poisson_uni_var
    Status:
    Succeeded
    Job identifier:
    sjqxatv7jft6qaw4
  • Action:
    count_regression_admissions_05_mental_and_behavioural_disorders_poisson_uni_var
    Status:
    Succeeded
    Job identifier:
    xrmmg5obvt3yiqdp
  • Action:
    count_regression_gp_infectious_disease_poisson_uni_var
    Status:
    Succeeded
    Job identifier:
    dlfsg5wojokoqebz
  • Action:
    count_regression_admissions_09_circulatory_system_poisson_uni_var
    Status:
    Succeeded
    Job identifier:
    lakojs4qsg3hzayx
  • Action:
    count_regression_gp_neoplastic_disease_poisson_uni_var
    Status:
    Succeeded
    Job identifier:
    dl3ef7tu2ti3qbzz
  • Action:
    count_regression_beddays_05_mental_and_behavioural_disorders_poisson_uni_var
    Status:
    Succeeded
    Job identifier:
    urcaoqejgkwp2tph
  • Action:
    count_regression_outpatient_neurology_poisson_uni_var
    Status:
    Succeeded
    Job identifier:
    262xjn4kswi2wje3
  • Action:
    count_regression_admissions_14_genitourinary_system_poisson_uni_var
    Status:
    Succeeded
    Job identifier:
    dfbo433cb7lngoqm
  • Action:
    count_regression_admissions_10_respiratory_system_poisson_uni_var
    Status:
    Succeeded
    Job identifier:
    3wj6h5pbpcvri4ew
  • Action:
    count_regression_beddays_04_endocrine_nutritional_and_metabolic_poisson_uni_var
    Status:
    Succeeded
    Job identifier:
    hyd5buj5kzxcwzm5
  • Action:
    count_regression_admissions_03_diseases_of_the_blood_poisson_uni_var
    Status:
    Succeeded
    Job identifier:
    jbucvmt3nfpmzixu
  • Action:
    count_regression_beddays_06_nervous_system_poisson_uni_var
    Status:
    Succeeded
    Job identifier:
    x3ehyvfcdrtm4hji
  • Action:
    count_regression_gp_skin_subcutaneous_tissue_poisson_uni_var
    Status:
    Succeeded
    Job identifier:
    l6otstshoij4ifua
  • Action:
    count_regression_beddays_03_diseases_of_the_blood_poisson_uni_var
    Status:
    Succeeded
    Job identifier:
    qnquwrulhjxeekej
  • Action:
    count_regression_outpatient_haematology_poisson_uni_var
    Status:
    Succeeded
    Job identifier:
    xz5twukmw22oynhh
  • Action:
    count_regression_outpatient_gastrointestinal_poisson_uni_var
    Status:
    Succeeded
    Job identifier:
    5kf4a7zqfbd4pblz
  • Action:
    count_regression_outpatient_oncology_poisson_uni_var
    Status:
    Succeeded
    Job identifier:
    ata7fxd7cm3oy62i
  • Action:
    count_regression_admissions_12_skin_and_subcutaneous_tissue_poisson_uni_var
    Status:
    Succeeded
    Job identifier:
    xo7vdh2vgmm2qnet
  • Action:
    count_regression_gp_digestive_system_poisson_uni_var
    Status:
    Succeeded
    Job identifier:
    zp567c7iv3hvprzo
  • Action:
    count_regression_admissions_01_infectious_and_parasitic_diseases_poisson_uni_var
    Status:
    Succeeded
    Job identifier:
    tfoyfms7qvkze7xw
  • Action:
    count_regression_outpatient_renal_poisson_uni_var
    Status:
    Succeeded
    Job identifier:
    qljdn2gxxi25plj5
  • Action:
    count_regression_beddays_09_circulatory_system_poisson_uni_var
    Status:
    Succeeded
    Job identifier:
    lk6jxffyhyimjzzs
  • Action:
    summarise_irr
    Status:
    Succeeded
    Job identifier:
    ufvknpzdnedadoxi

Pipeline

Show project.yaml
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Timeline

  • Created:

  • Started:

  • Finished:

  • Runtime: 07:25:09

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job request

Status
Succeeded
Backend
TPP
Requested by
James Farrell
Branch
main
Force run dependencies
No
Git commit hash
d984006
Requested actions
  • create_matched_cohort
  • weight_matched_cohort
  • count_regression_admissions_all_poisson_uni_var
  • count_regression_admissions_01_infectious_and_parasitic_diseases_poisson_uni_var
  • count_regression_admissions_02_neoplasms_poisson_uni_var
  • count_regression_admissions_03_diseases_of_the_blood_poisson_uni_var
  • count_regression_admissions_04_endocrine_nutritional_and_metabolic_poisson_uni_var
  • count_regression_admissions_05_mental_and_behavioural_disorders_poisson_uni_var
  • count_regression_admissions_06_nervous_system_poisson_uni_var
  • count_regression_admissions_09_circulatory_system_poisson_uni_var
  • count_regression_admissions_10_respiratory_system_poisson_uni_var
  • count_regression_admissions_11_digestive_system_poisson_uni_var
  • count_regression_admissions_12_skin_and_subcutaneous_tissue_poisson_uni_var
  • count_regression_admissions_14_genitourinary_system_poisson_uni_var
  • count_regression_admissions_23_self_harm_and_poisoning_by_drugs_poisson_uni_var
  • count_regression_beddays_all_poisson_uni_var
  • count_regression_beddays_01_infectious_and_parasitic_diseases_poisson_uni_var
  • count_regression_beddays_02_neoplasms_poisson_uni_var
  • count_regression_beddays_03_diseases_of_the_blood_poisson_uni_var
  • count_regression_beddays_04_endocrine_nutritional_and_metabolic_poisson_uni_var
  • count_regression_beddays_05_mental_and_behavioural_disorders_poisson_uni_var
  • count_regression_beddays_06_nervous_system_poisson_uni_var
  • count_regression_beddays_09_circulatory_system_poisson_uni_var
  • count_regression_beddays_10_respiratory_system_poisson_uni_var
  • count_regression_beddays_11_digestive_system_poisson_uni_var
  • count_regression_beddays_12_skin_and_subcutaneous_tissue_poisson_uni_var
  • count_regression_beddays_14_genitourinary_system_poisson_uni_var
  • count_regression_beddays_23_self_harm_and_poisoning_by_drugs_poisson_uni_var
  • count_regression_outpatient_all_poisson_uni_var
  • count_regression_outpatient_infectious_disease_poisson_uni_var
  • count_regression_outpatient_oncology_poisson_uni_var
  • count_regression_outpatient_haematology_poisson_uni_var
  • count_regression_outpatient_endocrinology_poisson_uni_var
  • count_regression_outpatient_mental_health_poisson_uni_var
  • count_regression_outpatient_neurology_poisson_uni_var
  • count_regression_outpatient_cardiology_poisson_uni_var
  • count_regression_outpatient_respiratory_poisson_uni_var
  • count_regression_outpatient_gastrointestinal_poisson_uni_var
  • count_regression_outpatient_dermatology_poisson_uni_var
  • count_regression_outpatient_renal_poisson_uni_var
  • count_regression_gp_all_poisson_uni_var
  • count_regression_gp_infectious_disease_poisson_uni_var
  • count_regression_gp_neoplastic_disease_poisson_uni_var
  • count_regression_gp_cellular_component_of_blood_poisson_uni_var
  • count_regression_gp_endocrine_system_poisson_uni_var
  • count_regression_gp_mental_disorder_poisson_uni_var
  • count_regression_gp_nervous_system_poisson_uni_var
  • count_regression_gp_cardiovascular_system_poisson_uni_var
  • count_regression_gp_respiratory_system_poisson_uni_var
  • count_regression_gp_digestive_system_poisson_uni_var
  • count_regression_gp_skin_subcutaneous_tissue_poisson_uni_var
  • count_regression_gp_genitourinary_system_poisson_uni_var
  • count_regression_gp_self_harm_poisson_uni_var
  • summarise_irr

Code comparison

Compare the code used in this job request