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Job request: 13242

Organisation:
ISARIC
Workspace:
hdruk-os-covid-paeds
ID:
qax3jxzmctfgxr2o
View repo View project.yaml

This page shows the technical details of what happened when the authorised researcher James Farrell requested one or more actions to be run against real patient data within a secure environment.

By cross-referencing the list of jobs with the pipeline section below, you can infer what security level the outputs were written to.

The output security levels are:

  • highly_sensitive
    • Researchers can never directly view these outputs
    • Researchers can only request code is run against them
  • moderately_sensitive
    • Can be viewed by an approved researcher by logging into a highly secure environment
    • These are the only outputs that can be requested for public release via a controlled output review service.

Jobs

  • Action:
    lcmm_data_prep
    Status:
    Status: Succeeded
    Job identifier:
    2pgac6e456oauhne
  • Action:
    lcmm_run_model_1
    Status:
    Status: Succeeded
    Job identifier:
    lrjflvhm3gets2g3
  • Action:
    lcmm_run_model_2
    Status:
    Status: Succeeded
    Job identifier:
    veubkfcsc6xlgwav
  • Action:
    lcmm_run_model_5
    Status:
    Status: Failed
    Job identifier:
    mnwkoytxooqoy4lu
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    lcmm_run_model_4
    Status:
    Status: Failed
    Job identifier:
    uj6gnxvighxwbovi
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    lcmm_results_1
    Status:
    Status: Failed
    Job identifier:
    rxe3hfj2rilgx3hm
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    lcmm_run_model_3
    Status:
    Status: Succeeded
    Job identifier:
    hv6eshkvxii5citf
  • Action:
    lcmm_results_2
    Status:
    Status: Failed
    Job identifier:
    ip63xdmdh3tpju3m
    Error:
    nonzero_exit: Job exited with error code 1
  • Action:
    lcmm_model_selection
    Status:
    Status: Failed
    Job identifier:
    6ya2olrjqna7v6sn
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    lcmm_results_5
    Status:
    Status: Failed
    Job identifier:
    3yzntjuad7z34qix
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    lcmm_results_4
    Status:
    Status: Failed
    Job identifier:
    7yqmpor5gl7jwxaz
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    lcmm_results_3
    Status:
    Status: Failed
    Job identifier:
    ndch4fkfxthtofzf
    Error:
    cancelled_by_user: Cancelled by user

Pipeline

Show project.yaml
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Timeline

  • Created:

  • Started:

  • Finished:

  • Runtime: 657:54:41

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job request

Status
Failed
Backend
TPP
Workspace
hdruk-os-covid-paeds
Requested by
James Farrell
Branch
main
Force run dependencies
No
Git commit hash
959139a
Requested actions
  • lcmm_data_prep
  • lcmm_run_model_1
  • lcmm_run_model_2
  • lcmm_run_model_3
  • lcmm_run_model_4
  • lcmm_run_model_5
  • lcmm_model_selection
  • lcmm_results_1
  • lcmm_results_2
  • lcmm_results_3
  • lcmm_results_4
  • lcmm_results_5

Code comparison

Compare the code used in this job request