Skip to content

Job request: 13371

Organisation:
ISARIC
Workspace:
hdruk-os-covid-paeds
ID:
u4cfmhbpsacisqus
View repo View project.yaml

This page shows the technical details of what happened when the authorised researcher James Farrell requested one or more actions to be run against real patient data within a secure environment.

By cross-referencing the list of jobs with the pipeline section below, you can infer what security level the outputs were written to.

The output security levels are:

  • highly_sensitive
    • Researchers can never directly view these outputs
    • Researchers can only request code is run against them
  • moderately_sensitive
    • Can be viewed by an approved researcher by logging into a highly secure environment
    • These are the only outputs that can be requested for public release via a controlled output review service.

Jobs

  • Action:
    generate_positive_cohort
    Status:
    Status: Succeeded
    Job identifier:
    q5kmbhb2o2z6r5zj
  • Action:
    mcc_data_prep
    Status:
    Status: Succeeded
    Job identifier:
    wgb7rxofg7oynkwk
  • Action:
    dtw_data_prep
    Status:
    Status: Succeeded
    Job identifier:
    5pddfwh6x3mqiwzs
  • Action:
    lcmm_data_prep
    Status:
    Status: Succeeded
    Job identifier:
    xt7lvymgf2mwkgdz
  • Action:
    lcmm_results_1
    Status:
    Status: Succeeded
    Job identifier:
    hfrx3puksnrzkf25
  • Action:
    lcmm_results_2
    Status:
    Status: Succeeded
    Job identifier:
    tbtcn33qoituebxw
  • Action:
    lcmm_results_3
    Status:
    Status: Succeeded
    Job identifier:
    d22zt6lwf7hbwrrp
  • Action:
    lcmm_results_4
    Status:
    Status: Failed
    Job identifier:
    a4kudmdbbavbd5di
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    lcmm_results_5
    Status:
    Status: Failed
    Job identifier:
    5m3ssymclb2sml5u
    Error:
    cancelled_by_user: Cancelled by user

Pipeline

Show project.yaml
This file is too large to render, try viewing it on GitHub .

Timeline

  • Created:

  • Started:

  • Finished:

  • Runtime: 00:17:55

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job request

Status
Failed
Backend
TPP
Workspace
hdruk-os-covid-paeds
Requested by
James Farrell
Branch
main
Force run dependencies
No
Git commit hash
d81cef0
Requested actions
  • generate_positive_cohort
  • mcc_data_prep
  • dtw_data_prep
  • lcmm_data_prep
  • lcmm_results_1
  • lcmm_results_2
  • lcmm_results_3
  • lcmm_results_4
  • lcmm_results_5

Code comparison

Compare the code used in this job request