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University of Bristol logo Project number: 12

Investigating events following SARS-CoV-2 infection

Investigating events following SARS-CoV-2 infection is an OpenSAFELY project from University of Bristol. Every time a researcher runs their analytic code against patient data, it is audited in public here.

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Workspaces

  • Workspace:
    post-covid-autoimmune
    Status:
    Active
    GitHub repository:
    post-covid-autoimmune
    Git branch:
    main
    Created at:
  • Workspace:
    post-covid-autoimmune-studydef
    Status:
    Active
    GitHub repository:
    post-covid-autoimmune
    Git branch:
    Explore_study_def
    Created at:
  • Workspace:
    post-covid-autoimmune-v3
    Status:
    Active
    GitHub repository:
    post-covid-autoimmune
    Git branch:
    main
    Created at:
  • Workspace:
    post-covid-diabetes
    Status:
    Active
    GitHub repository:
    post-covid-diabetes
    Git branch:
    main
    Created at:
  • Workspace:
    post-covid-gastrointestinal-death
    Status:
    Active
    GitHub repository:
    post-covid-gastrointestinal
    Git branch:
    main
    Created at:
  • Workspace:
    post-covid-gi-bleeds
    Status:
    Active
    GitHub repository:
    post-covid-gi-bleeds
    Git branch:
    main
    Created at:
  • Workspace:
    post-covid-mentalhealth-v3
    Status:
    Active
    GitHub repository:
    post-covid-mentalhealth
    Git branch:
    rerun_dereg
    Created at:
  • Workspace:
    diabetes-post-hoc-analysis
    Status:
    Archived Creating new jobs is disabled
    GitHub repository:
    post-covid-diabetes
    Git branch:
    add-new-diabetes-analyses
    Created at:
  • Workspace:
    gastrointestinal_cox
    Status:
    Archived Creating new jobs is disabled
    GitHub repository:
    post-covid-gastrointestinal
    Git branch:
    fix-coxipw-error
    Created at:
  • Workspace:
    gastrointestinal-coxipw3
    Status:
    Archived Creating new jobs is disabled
    GitHub repository:
    post-covid-gastrointestinal
    Git branch:
    fix-cox-ipw_3
    Created at:
  • Workspace:
    gastrointestinal_subcovid_table2
    Status:
    Archived Creating new jobs is disabled
    GitHub repository:
    post-covid-gastrointestinal
    Git branch:
    main
    Created at:
  • Workspace:
    gastrointestinal_table2_subcovid
    Status:
    Archived Creating new jobs is disabled
    GitHub repository:
    post-covid-gastrointestinal
    Git branch:
    table2-turn-off-main-analysis
    Created at:
  • Workspace:
    nhsdtre_replication
    Status:
    Archived Creating new jobs is disabled
    GitHub repository:
    post-covid-bristol
    Git branch:
    main
    Created at:
  • Workspace:
    post-covid-cvd-methods
    Status:
    Archived Creating new jobs is disabled
    GitHub repository:
    post-covid-cvd-methods
    Git branch:
    main
    Created at:
  • Workspace:
    post-covid-cvd-methods-redux
    Status:
    Archived Creating new jobs is disabled
    GitHub repository:
    post-covid-cvd-methods-redux
    Git branch:
    main
    Created at:
  • Workspace:
    post-covid-diabetes-new-study-def-test
    Status:
    Archived Creating new jobs is disabled
    GitHub repository:
    post-covid-diabetes
    Git branch:
    make-diabetes-three-cohort-repo
    Created at:
  • Workspace:
    post-covid-gastrointestina-extf
    Status:
    Archived Creating new jobs is disabled
    GitHub repository:
    post-covid-gastrointestinal
    Git branch:
    main
    Created at:
  • Workspace:
    post-covid-gastrointestinal
    Status:
    Archived Creating new jobs is disabled
    GitHub repository:
    post-covid-gastrointestinal
    Git branch:
    main
    Created at:
  • Workspace:
    post-covid-mentalhealth
    Status:
    Archived Creating new jobs is disabled
    GitHub repository:
    post-covid-mentalhealth
    Git branch:
    main
    Created at:
  • Workspace:
    post-covid-mentalhealth-studydef
    Status:
    Archived Creating new jobs is disabled
    GitHub repository:
    post-covid-mentalhealth
    Git branch:
    main
    Created at:
  • Workspace:
    post-covid-mentalhealth-v2
    Status:
    Archived Creating new jobs is disabled
    GitHub repository:
    post-covid-mentalhealth
    Git branch:
    main
    Created at:
  • Workspace:
    post-covid-neurodegenerative
    Status:
    Archived Creating new jobs is disabled
    GitHub repository:
    post-covid-neurodegenerative
    Git branch:
    main
    Created at:
  • Workspace:
    post-covid-neurodegenerative-extf
    Status:
    Archived Creating new jobs is disabled
    GitHub repository:
    post-covid-neurodegenerative
    Git branch:
    main
    Created at:
  • Workspace:
    post-covid-neuro-v3
    Status:
    Archived Creating new jobs is disabled
    GitHub repository:
    post-covid-neurodegenerative
    Git branch:
    main
    Created at:
  • Workspace:
    post-covid-pre-vaccinated-cardiovascular
    Status:
    Archived Creating new jobs is disabled
    GitHub repository:
    post-covid-pre-vaccinated-cardiovascular
    Git branch:
    main
    Created at:
  • Workspace:
    post-covid-renal
    Status:
    Archived Creating new jobs is disabled
    GitHub repository:
    post-covid-renal
    Git branch:
    main
    Created at:
  • Workspace:
    post-covid-renal-v2
    Status:
    Archived Creating new jobs is disabled
    GitHub repository:
    post-covid-renal
    Git branch:
    main
    Created at:
  • Workspace:
    post-covid-respiratory
    Status:
    Archived Creating new jobs is disabled
    GitHub repository:
    post-covid-respiratory
    Git branch:
    main
    Created at:
  • Workspace:
    post-covid-respiratory-extended-followup
    Status:
    Archived Creating new jobs is disabled
    GitHub repository:
    post-covid-respiratory
    Git branch:
    main
    Created at:
  • Workspace:
    post-covid-respiratory-incident-events
    Status:
    Archived Creating new jobs is disabled
    GitHub repository:
    post-covid-respiratory-incident-events
    Git branch:
    main
    Created at:
  • Workspace:
    post-covid-respiratory-repeat-events
    Status:
    Archived Creating new jobs is disabled
    GitHub repository:
    post-covid-respiratory
    Git branch:
    main
    Created at:
  • Workspace:
    post-covid-unvaccinated
    Status:
    Archived Creating new jobs is disabled
    GitHub repository:
    post-covid-unvaccinated
    Git branch:
    main
    Created at:
  • Workspace:
    post-covid-vaccinated
    Status:
    Archived Creating new jobs is disabled
    GitHub repository:
    post-covid-vaccinated
    Git branch:
    main
    Created at:

Project timeline

  • Project created:

  • Code first run:

Why is the code first run date before the project created date?

In OpenSAFELY Jobs, code is run within a workspace. The workspaces feature was introduced before the projects feature, meaning that in some cases, workspaces were created before projects.

Public repos

Private repos

These repos are currently not publicly visible

In accordance with the Principles of OpenSAFELY we expect all code from all users to be made public.

However, some GitHub repositories may be private during the development stage of a project, which means any links to them from this site will return a '404 Not Found' error unless you are logged in and have the relevant permissions.

Outputs

Researchers

  • Alex Whitmarsh
  • Elsie Horne
  • Emily Eyles
  • Emma Tarmey
  • Genevieve Cezard
  • Jose Ignacio Cuitun Coronado
  • Kurt Taylor
  • Marwa Al Arab
  • Michael Gulley
  • Rachel Denholm
  • Rochelle Knight
  • Scott Walter
  • Venexia Walker
  • Yinghui Wei