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Job request: 14780

Organisation:
University of Bristol
Workspace:
gastrointestinal-coxipw3
ID:
dlc4uknf4lsvdpb2
View repo View project.yaml

This page shows the technical details of what happened when the authorised researcher Marwa Al Arab requested one or more actions to be run against real patient data within a secure environment.

By cross-referencing the list of jobs with the pipeline section below, you can infer what security level the outputs were written to.

The output security levels are:

  • highly_sensitive
    • Researchers can never directly view these outputs
    • Researchers can only request code is run against them
  • moderately_sensitive
    • Can be viewed by an approved researcher by logging into a highly secure environment
    • These are the only outputs that can be requested for public release via a controlled output review service.

Jobs

  • Action:
    vax_eligibility_inputs
    Status:
    Succeeded
    Job identifier:
    msvkmqzih6onyd3l
  • Action:
    generate_study_population_prelim
    Status:
    Succeeded
    Job identifier:
    7og2xsryjkvpofmg
  • Action:
    generate_index_dates
    Status:
    Succeeded
    Job identifier:
    bub27odhyvtbmicf
  • Action:
    generate_study_population_prevax
    Status:
    Succeeded
    Job identifier:
    hwows2k6rgo2dapo
  • Action:
    generate_study_population_unvax
    Status:
    Succeeded
    Job identifier:
    rel725fbuc6eeqv2
  • Action:
    preprocess_data_unvax
    Status:
    Succeeded
    Job identifier:
    4oyvlzmzkovqk7nr
  • Action:
    preprocess_data_prevax
    Status:
    Succeeded
    Job identifier:
    sgyhxh7cnyenxcud
  • Action:
    generate_study_population_vax
    Status:
    Succeeded
    Job identifier:
    4usgtn7l7ci5bqqg
  • Action:
    preprocess_data_vax
    Status:
    Succeeded
    Job identifier:
    wjhojr262pg23lpv
  • Action:
    stage1_data_cleaning_all
    Status:
    Succeeded
    Job identifier:
    647aba4vwrqwihpf
  • Action:
    make_model_input-cohort_prevax-main-abdominal_distension
    Status:
    Failed
    Job identifier:
    imu5h2oza7wqrhwd
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    describe_model_input-cohort_prevax-main-abdominal_distension
    Status:
    Failed
    Job identifier:
    zmk3gci5y4ew7sne
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    cox_ipw-cohort_prevax-main-abdominal_distension
    Status:
    Failed
    Job identifier:
    wnmq5gp2jpqor2aw
    Error:
    dependency_failed: Not starting as dependency failed

Pipeline

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Timeline

  • Created:

  • Started:

  • Finished:

  • Runtime: 197:20:53

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job request

Status
Failed
Backend
TPP
Workspace
gastrointestinal-coxipw3
Requested by
Marwa Al Arab
Branch
fix-cox-ipw_3
Force run dependencies
No
Git commit hash
3c28dfb
Requested actions
  • vax_eligibility_inputs
  • generate_study_population_prelim
  • generate_index_dates
  • generate_study_population_prevax
  • generate_study_population_vax
  • generate_study_population_unvax
  • preprocess_data_prevax
  • preprocess_data_vax
  • preprocess_data_unvax
  • stage1_data_cleaning_all
  • make_model_input-cohort_prevax-main-abdominal_distension
  • describe_model_input-cohort_prevax-main-abdominal_distension
  • cox_ipw-cohort_prevax-main-abdominal_distension

Code comparison

Compare the code used in this job request

  • No previous job request available for comparison