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Job request: 14702

Organisation:
University of Bristol
Workspace:
gastrointestinal_cox
ID:
spal4ttcxeowyyi3
View repo View project.yaml

This page shows the technical details of what happened when the authorised researcher Marwa Al Arab requested one or more actions to be run against real patient data within a secure environment.

By cross-referencing the list of jobs with the pipeline section below, you can infer what security level the outputs were written to.

The output security levels are:

  • highly_sensitive
    • Researchers can never directly view these outputs
    • Researchers can only request code is run against them
  • moderately_sensitive
    • Can be viewed by an approved researcher by logging into a highly secure environment
    • These are the only outputs that can be requested for public release via a controlled output review service.

Jobs

  • Action:
    vax_eligibility_inputs
    Status:
    Succeeded
    Job identifier:
    jnelhgaterf2wn6m
  • Action:
    generate_study_population_prelim
    Status:
    Succeeded
    Job identifier:
    2yq2uz5nprhiwhpc
  • Action:
    generate_index_dates
    Status:
    Failed
    Job identifier:
    rddapduj37e2xuct
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    preprocess_data_prevax
    Status:
    Failed
    Job identifier:
    xzujieln7at7a2p3
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    generate_study_population_vax
    Status:
    Failed
    Job identifier:
    yma3teh56ppu6oew
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    preprocess_data_vax
    Status:
    Failed
    Job identifier:
    efzgmixycg2uhmsq
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    generate_study_population_prevax
    Status:
    Failed
    Job identifier:
    m63cnp734dmeysio
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    make_model_input-cohort_prevax-main-acute_pancreatitis
    Status:
    Failed
    Job identifier:
    5cowalftxvnpisn3
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    stage1_data_cleaning_all
    Status:
    Failed
    Job identifier:
    j4jz2fy5v74ogbk4
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    cox_ipw-cohort_prevax-main-acute_pancreatitis
    Status:
    Failed
    Job identifier:
    p6eytczrfzgim5mq
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    generate_study_population_unvax
    Status:
    Failed
    Job identifier:
    v5emjsswk2yf5w34
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    preprocess_data_unvax
    Status:
    Failed
    Job identifier:
    3wm7w4jv6vdmr6qg
    Error:
    dependency_failed: Not starting as dependency failed

Pipeline

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Timeline

  • Created:

  • Started:

  • Finished:

  • Runtime: 00:51:16

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job request

Status
Failed
Backend
TPP
Workspace
gastrointestinal_cox
Requested by
Marwa Al Arab
Branch
fix-coxipw-error
Force run dependencies
No
Git commit hash
fe4519b
Requested actions
  • cox_ipw-cohort_prevax-main-acute_pancreatitis

Code comparison

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