Job request: 13683
- Organisation:
- University of Bristol
- Workspace:
- post-covid-diabetes
- ID:
- cam5mbzixltqdswr
This page shows the technical details of what happened when the authorised researcher Kurt Taylor requested one or more actions to be run against real patient data within a secure environment.
By cross-referencing the list of jobs with the pipeline section below, you can infer what security level the outputs were written to.
The output security levels are:
-
highly_sensitive
- Researchers can never directly view these outputs
- Researchers can only request code is run against them
-
moderately_sensitive
- Can be viewed by an approved researcher by logging into a highly secure environment
- These are the only outputs that can be requested for public release via a controlled output review service.
Jobs
-
- Job identifier:
-
lilgcgxy2fjon3pe
-
- Job identifier:
-
h4fvtyrfnce5tjet
-
- Job identifier:
-
7ok2cjxv65xnrgsk
-
- Job identifier:
-
mrspwedzmbuffane
-
- Job identifier:
-
fsr42t3wstt6eblf
-
- Job identifier:
-
hvbz3ujo6vjhs5lf
-
- Job identifier:
-
w6vijoivuy7j24du
-
- Job identifier:
-
mveezbppkxu6wtm7
-
- Job identifier:
-
63gtxm6tckomuuk2
-
- Job identifier:
-
an7s6fjc2lyo6vsc
-
- Job identifier:
-
x5mntwiv26ssir2q
-
- Job identifier:
-
oi44zqlxdpybcfc2 - Error:
- nonzero_exit: Job exited with error code 1
-
- Job identifier:
-
vnt4ybhm7jsrwgxr - Error:
- nonzero_exit: Job exited with error code 1
-
- Job identifier:
-
6gr24y2smeg43eyd
-
- Job identifier:
-
v5dqbvd4iazb26ph
-
- Job identifier:
-
ujkrj2rpo7utfcex - Error:
- nonzero_exit: Job exited with error code 1
-
- Job identifier:
-
4thywlvnpjxwuidp
-
- Job identifier:
-
h3er5lqp7iviv5ta
-
- Job identifier:
-
fz6dk6mrnwkpkhl2
-
- Job identifier:
-
5bayy475c6yaqh6c
-
- Job identifier:
-
ijptbbnmkyo3zwmy - Error:
- unmatched_patterns: No outputs found matching patterns: - output/not-for-review/describe_data_surv_t2dm_*_vax_*_time_periods.txt
-
- Job identifier:
-
tgmscqkljdqwiti6 - Error:
- unmatched_patterns: No outputs found matching patterns: - output/not-for-review/describe_data_surv_t2dm_obes_*_vax_*_time_periods.txt
-
- Job identifier:
-
mjjvmiegalmqbzpr - Error:
- unmatched_patterns: No outputs found matching patterns: - output/not-for-review/describe_data_surv_otherdm_*_vax_*_time_periods.txt
-
- Job identifier:
-
am6hawuwqzqcduqo - Error:
- unmatched_patterns: No outputs found matching patterns: - output/not-for-review/describe_data_surv_t1dm_*_vax_*_time_periods.txt
-
- Job identifier:
-
a5rqlzvj4cxcmhte - Error:
- unmatched_patterns: No outputs found matching patterns: - output/not-for-review/describe_data_surv_t2dm_pd_*_vax_*_time_periods.txt
-
- Job identifier:
-
jrzyhhrv7oum5qvb - Error:
- unmatched_patterns: No outputs found matching patterns: - output/not-for-review/describe_data_surv_t2dm_obes_*_unvax_*_time_periods.txt
-
- Job identifier:
-
oqaliszvjzemtcwy - Error:
- unmatched_patterns: No outputs found matching patterns: - output/not-for-review/describe_data_surv_gestationaldm_*_vax_*_time_periods.txt
-
- Job identifier:
-
v5kt6qeltd5t2jwu - Error:
- unmatched_patterns: No outputs found matching patterns: - output/not-for-review/describe_data_surv_t2dm_obes_no_*_vax_*_time_periods.txt
-
- Job identifier:
-
tu7cry7l636lojgv - Error:
- unmatched_patterns: No outputs found matching patterns: - output/not-for-review/describe_data_surv_t2dm_pre_rec_*_vax_*_time_periods.txt
-
- Job identifier:
-
slc7zerp3ntmnbql - Error:
- unmatched_patterns: No outputs found matching patterns: - output/not-for-review/describe_data_surv_t2dm_*_unvax_*_time_periods.txt
-
- Job identifier:
-
mwpdr6m27jv3di2b - Error:
- unmatched_patterns: No outputs found matching patterns: - output/not-for-review/describe_data_surv_t2dm_obes_no_*_unvax_*_time_periods.txt
-
- Job identifier:
-
w55eo4u2khrl72ek - Error:
- unmatched_patterns: No outputs found matching patterns: - output/not-for-review/describe_data_surv_t2dm_pd_no_*_unvax_*_time_periods.txt
-
- Job identifier:
-
p4xgt75vhoqbcjio - Error:
- unmatched_patterns: No outputs found matching patterns: - output/not-for-review/describe_data_surv_t2dm_pre_rec_*_unvax_*_time_periods.txt
-
- Job identifier:
-
ib5s42xm7yeaqzfn - Error:
- unmatched_patterns: No outputs found matching patterns: - output/not-for-review/describe_data_surv_t2dm_pd_no_*_vax_*_time_periods.txt
-
- Job identifier:
-
uu4pveawir3rxsmf
-
- Job identifier:
-
sw6ebe3zmpxe7upl - Error:
- unmatched_patterns: No outputs found matching patterns: - output/not-for-review/describe_data_surv_gestationaldm_*_unvax_*_time_periods.txt
-
- Job identifier:
-
vjceib22zro2qjvz
-
- Job identifier:
-
vkuh2b7hsbov24xe - Error:
- unmatched_patterns: No outputs found matching patterns: - output/not-for-review/describe_data_surv_t1dm_*_unvax_*_time_periods.txt
-
- Job identifier:
-
vutqtlqghhq3qeij - Error:
- unmatched_patterns: No outputs found matching patterns: - output/not-for-review/describe_data_surv_t2dm_obes_*_prevax_*_time_periods.txt
-
- Job identifier:
-
nzb7e7fi6a4le3lu - Error:
- nonzero_exit: Job exited with error code 1
-
- Job identifier:
-
oouascq6clq2upfb - Error:
- unmatched_patterns: No outputs found matching patterns: - output/not-for-review/describe_data_surv_t1dm_extended_follow_up_*_prevax_*_time_periods.txt
-
- Job identifier:
-
vy5yn2kqu2ttxjnj - Error:
- unmatched_patterns: No outputs found matching patterns: - output/not-for-review/describe_data_surv_t2dm_post_rec_*_prevax_*_time_periods.txt
-
- Job identifier:
-
6bmmosfx5p372xop - Error:
- unmatched_patterns: No outputs found matching patterns: - output/not-for-review/describe_data_surv_t2dm_*_prevax_*_time_periods.txt
-
- Job identifier:
-
zodqaumsamglz7se - Error:
- unmatched_patterns: No outputs found matching patterns: - output/not-for-review/describe_data_surv_otherdm_extended_follow_up_*_prevax_*_time_periods.txt
-
- Job identifier:
-
avnv4qdkgqiy565f - Error:
- unmatched_patterns: No outputs found matching patterns: - output/not-for-review/describe_data_surv_otherdm_*_prevax_*_time_periods.txt
-
- Job identifier:
-
zvg7cwgvzadkwmkt - Error:
- unmatched_patterns: No outputs found matching patterns: - output/not-for-review/describe_data_surv_t2dm_rec_*_prevax_*_time_periods.txt
-
- Job identifier:
-
lvx3kqdxrost6ftw - Error:
- unmatched_patterns: No outputs found matching patterns: - output/not-for-review/describe_data_surv_gestationaldm_*_prevax_*_time_periods.txt
-
- Job identifier:
-
kqg2vsh5zivwrjzr - Error:
- unmatched_patterns: No outputs found matching patterns: - output/not-for-review/describe_data_surv_t2dm_follow_*_prevax_*_time_periods.txt
-
- Job identifier:
-
iopflimbwxhxjqfx - Error:
- unmatched_patterns: No outputs found matching patterns: - output/not-for-review/describe_data_surv_t2dm_pd_*_prevax_*_time_periods.txt
-
- Job identifier:
-
vnq7wkrleqlh3scl - Error:
- unmatched_patterns: No outputs found matching patterns: - output/not-for-review/describe_data_surv_t2dm_obes_no_*_prevax_*_time_periods.txt
-
- Job identifier:
-
crkqrz5b2f6oa75r - Error:
- unmatched_patterns: No outputs found matching patterns: - output/not-for-review/describe_data_surv_t1dm_*_prevax_*_time_periods.txt
-
- Job identifier:
-
ssd6w7ivr54ktihb - Error:
- unmatched_patterns: No outputs found matching patterns: - output/not-for-review/describe_data_surv_t2dm_pd_no_*_prevax_*_time_periods.txt
-
- Job identifier:
-
jezkitsjruuniyxy - Error:
- unmatched_patterns: No outputs found matching patterns: - output/not-for-review/describe_data_surv_t2dm_extended_follow_up_*_prevax_*_time_periods.txt
-
- Job identifier:
-
jxmfdegakwcgzigi - Error:
- unmatched_patterns: No outputs found matching patterns: - output/not-for-review/describe_data_surv_t2dm_pre_rec_*_prevax_*_time_periods.txt
-
- Action:
- stata_cox_model_t2dm_extended_follow_up_covid_pheno_hospitalised_prevax_extended
- Status:
- Status: Failed
- Job identifier:
-
pgngmdukljeci62g - Error:
- dependency_failed: Not starting as dependency failed
-
- Job identifier:
-
i45uyegjrdzkk2h6 - Error:
- dependency_failed: Not starting as dependency failed
-
- Job identifier:
-
bms2bkueivnlvzkh - Error:
- dependency_failed: Not starting as dependency failed
-
- Job identifier:
-
wxdpwiet57756grj - Error:
- dependency_failed: Not starting as dependency failed
-
- Job identifier:
-
xq7vpo3rv7q5tor7 - Error:
- dependency_failed: Not starting as dependency failed
-
- Job identifier:
-
v73z32ij4equ5jdg - Error:
- dependency_failed: Not starting as dependency failed
-
- Job identifier:
-
k4goxxg33lqfu2ei - Error:
- dependency_failed: Not starting as dependency failed
-
- Action:
- stata_cox_model_t2dm_follow_covid_pheno_non_hospitalised_prevax_reduced
- Status:
- Status: Failed
- Job identifier:
-
hkkpvgo2377xzmu6 - Error:
- dependency_failed: Not starting as dependency failed
-
- Job identifier:
-
t7av2hxkzswahl7e - Error:
- dependency_failed: Not starting as dependency failed
-
- Job identifier:
-
hzrb2y5ftnfvyfga - Error:
- dependency_failed: Not starting as dependency failed
-
- Action:
- stata_cox_model_t2dm_post_rec_covid_pheno_hospitalised_prevax_reduced
- Status:
- Status: Failed
- Job identifier:
-
kgm7xqa4ghtk7zv3 - Error:
- dependency_failed: Not starting as dependency failed
-
- Job identifier:
-
gs4oty7kci7uec3l - Error:
- dependency_failed: Not starting as dependency failed
-
- Job identifier:
-
buy24pjwi3l5z5q3 - Error:
- dependency_failed: Not starting as dependency failed
-
- Job identifier:
-
ecbgqogoshcgbbfj - Error:
- dependency_failed: Not starting as dependency failed
-
- Job identifier:
-
4qjkcdgaczaz3txe - Error:
- dependency_failed: Not starting as dependency failed
-
- Action:
- stata_cox_model_t2dm_extended_follow_up_covid_pheno_non_hospitalised_prevax_extended
- Status:
- Status: Failed
- Job identifier:
-
qm44o4btazcgshkg - Error:
- dependency_failed: Not starting as dependency failed
-
- Job identifier:
-
jjkqddvwhoywxfyy - Error:
- dependency_failed: Not starting as dependency failed
-
- Job identifier:
-
7w2uj6tuv623nw52 - Error:
- dependency_failed: Not starting as dependency failed
-
- Action:
- stata_cox_model_t2dm_covid_pheno_non_hospitalised_prevax_reduced_day_zero
- Status:
- Status: Failed
- Job identifier:
-
f4kmsbjwzoxnac2c - Error:
- dependency_failed: Not starting as dependency failed
-
- Job identifier:
-
w2ecxk7c3l4exf4p - Error:
- dependency_failed: Not starting as dependency failed
-
- Job identifier:
-
ms7x65gysgakt5oe - Error:
- dependency_failed: Not starting as dependency failed
-
- Job identifier:
-
3lgjg64ij7vuh7wh - Error:
- dependency_failed: Not starting as dependency failed
-
- Job identifier:
-
m5dmjtxmva3ktrxo - Error:
- dependency_failed: Not starting as dependency failed
-
- Job identifier:
-
fnohcsfhwudabgc6 - Error:
- dependency_failed: Not starting as dependency failed
-
- Action:
- stata_cox_model_t2dm_follow_covid_pheno_non_hospitalised_prevax_reduced_day_zero
- Status:
- Status: Failed
- Job identifier:
-
fnpfbrrnnrioa4lu - Error:
- dependency_failed: Not starting as dependency failed
-
- Action:
- stata_cox_model_t2dm_rec_covid_pheno_hospitalised_prevax_reduced_day_zero
- Status:
- Status: Failed
- Job identifier:
-
lgrzggqmvh424n5q - Error:
- dependency_failed: Not starting as dependency failed
-
- Action:
- stata_cox_model_t2dm_pre_rec_covid_pheno_hospitalised_prevax_reduced_day_zero
- Status:
- Status: Failed
- Job identifier:
-
alki3ahil5hingyo - Error:
- dependency_failed: Not starting as dependency failed
-
- Action:
- stata_cox_model_t2dm_covid_pheno_non_hospitalised_unvax_reduced_day_zero
- Status:
- Status: Failed
- Job identifier:
-
7io343kox2m4pq24 - Error:
- dependency_failed: Not starting as dependency failed
-
- Action:
- stata_cox_model_t2dm_follow_covid_pheno_hospitalised_prevax_reduced_day_zero
- Status:
- Status: Failed
- Job identifier:
-
mioemwx26wb6uyxa - Error:
- dependency_failed: Not starting as dependency failed
-
- Job identifier:
-
j5ome4au2vysuuqz - Error:
- dependency_failed: Not starting as dependency failed
-
- Action:
- stata_cox_model_t2dm_covid_pheno_hospitalised_prevax_reduced_day_zero
- Status:
- Status: Failed
- Job identifier:
-
milamvpb7zqp2sma - Error:
- dependency_failed: Not starting as dependency failed
-
- Job identifier:
-
dyhyjf7g73aex54p - Error:
- dependency_failed: Not starting as dependency failed
-
- Job identifier:
-
r2lwsiorzdunmu6p - Error:
- dependency_failed: Not starting as dependency failed
-
- Job identifier:
-
n2uanxeta2l3ejbw - Error:
- dependency_failed: Not starting as dependency failed
-
- Job identifier:
-
2ero72jqg6f7oq4k - Error:
- dependency_failed: Not starting as dependency failed
-
- Job identifier:
-
66ndzokkw2rgfnb6 - Error:
- dependency_failed: Not starting as dependency failed
-
- Job identifier:
-
a2mfynzrdbv2n627 - Error:
- dependency_failed: Not starting as dependency failed
-
- Job identifier:
-
qiv6dsar2e76myan - Error:
- dependency_failed: Not starting as dependency failed
-
- Job identifier:
-
ig67mruet627jkrn - Error:
- dependency_failed: Not starting as dependency failed
-
- Action:
- stata_cox_model_t2dm_covid_pheno_non_hospitalised_vax_reduced_day_zero
- Status:
- Status: Failed
- Job identifier:
-
zgaqjwm673cevw7c - Error:
- dependency_failed: Not starting as dependency failed
-
- Action:
- stata_cox_model_t2dm_post_rec_covid_pheno_hospitalised_prevax_reduced_day_zero
- Status:
- Status: Failed
- Job identifier:
-
n56b7o4cimpadjpo - Error:
- dependency_failed: Not starting as dependency failed
Pipeline
Show project.yaml
This file is too large to render, try viewing it on GitHub
.
Timeline
-
Created:
-
Started:
-
Finished:
-
Runtime: 150:23:29
These timestamps are generated and stored using the UTC timezone on the TPP backend.
Job request
- Status
-
Failed
- Backend
- TPP
- Workspace
- post-covid-diabetes
- Requested by
- Kurt Taylor
- Branch
- main
- Force run dependencies
- No
- Git commit hash
- 5f48d36
- Requested actions
-
-
stage1_data_cleaning_prevax -
stage1_data_cleaning_vax -
stage1_data_cleaning_unvax -
stage1_end_date_table_prevax -
stage1_end_date_table_vax -
stage1_end_date_table_unvax -
generate_study_population_prevax_diabetes_analyis -
generate_study_population_vax_diabetes_analyis -
generate_study_population_unvax_diabetes_analyis -
diabetes_post_hoc_prevax -
diabetes_post_hoc_vax -
diabetes_post_hoc_unvax -
stage2_missing_table1_all -
stage3_diabetes_flow_prevax -
stage3_diabetes_flow_vax -
stage3_diabetes_flow_unvax -
stage4_table_2_prevax -
stage4_table_2_vax -
stage4_table_2_unvax -
stage4_venn_diagram_all -
Analysis_cox_t1dm_prevax -
Analysis_cox_t1dm_vax -
Analysis_cox_t1dm_unvax -
Analysis_cox_t2dm_prevax -
Analysis_cox_t2dm_vax -
Analysis_cox_t2dm_unvax -
Analysis_cox_t2dm_pre_rec_prevax -
Analysis_cox_t2dm_pre_rec_vax -
Analysis_cox_t2dm_pre_rec_unvax -
Analysis_cox_t2dm_pd_prevax -
Analysis_cox_t2dm_pd_vax -
Analysis_cox_t2dm_pd_unvax -
Analysis_cox_t2dm_pd_no_prevax -
Analysis_cox_t2dm_pd_no_vax -
Analysis_cox_t2dm_pd_no_unvax -
Analysis_cox_t2dm_obes_prevax -
Analysis_cox_t2dm_obes_vax -
Analysis_cox_t2dm_obes_unvax -
Analysis_cox_t2dm_obes_no_prevax -
Analysis_cox_t2dm_obes_no_vax -
Analysis_cox_t2dm_obes_no_unvax -
Analysis_cox_otherdm_prevax -
Analysis_cox_otherdm_vax -
Analysis_cox_otherdm_unvax -
Analysis_cox_gestationaldm_prevax -
Analysis_cox_gestationaldm_vax -
Analysis_cox_gestationaldm_unvax -
Analysis_cox_t2dm_rec_prevax -
Analysis_cox_t2dm_post_rec_prevax -
Analysis_cox_t2dm_follow_prevax -
Analysis_cox_t1dm_extended_follow_up_prevax -
Analysis_cox_t2dm_extended_follow_up_prevax -
Analysis_cox_otherdm_extended_follow_up_prevax -
Analysis_cox_gestationaldm_extended_follow_up_prevax -
stata_cox_model_t2dm_covid_pheno_hospitalised_prevax_reduced -
stata_cox_model_t2dm_covid_pheno_hospitalised_vax_reduced -
stata_cox_model_t2dm_covid_pheno_hospitalised_unvax_reduced -
stata_cox_model_t2dm_main_prevax_reduced -
stata_cox_model_t2dm_main_vax_reduced -
stata_cox_model_t2dm_main_unvax_reduced -
stata_cox_model_t2dm_covid_pheno_non_hospitalised_prevax_reduced -
stata_cox_model_t2dm_covid_pheno_non_hospitalised_vax_reduced -
stata_cox_model_t2dm_covid_pheno_non_hospitalised_unvax_reduced -
stata_cox_model_t2dm_follow_covid_pheno_hospitalised_prevax_reduced -
stata_cox_model_t2dm_follow_main_prevax_reduced -
stata_cox_model_t2dm_follow_covid_pheno_non_hospitalised_prevax_reduced -
stata_cox_model_t2dm_rec_covid_pheno_hospitalised_prevax_reduced -
stata_cox_model_t2dm_pre_rec_covid_pheno_hospitalised_prevax_reduced -
stata_cox_model_t2dm_post_rec_covid_pheno_hospitalised_prevax_reduced -
stata_cox_model_t2dm_rec_main_prevax_reduced -
stata_cox_model_t2dm_pre_rec_main_prevax_reduced -
stata_cox_model_t2dm_post_rec_main_prevax_reduced -
stata_cox_model_t2dm_covid_pheno_hospitalised_prevax_reduced_day_zero -
stata_cox_model_t2dm_covid_pheno_hospitalised_vax_reduced_day_zero -
stata_cox_model_t2dm_covid_pheno_hospitalised_unvax_reduced_day_zero -
stata_cox_model_t2dm_main_prevax_reduced_day_zero -
stata_cox_model_t2dm_main_vax_reduced_day_zero -
stata_cox_model_t2dm_main_unvax_reduced_day_zero -
stata_cox_model_t2dm_covid_pheno_non_hospitalised_prevax_reduced_day_zero -
stata_cox_model_t2dm_covid_pheno_non_hospitalised_vax_reduced_day_zero -
stata_cox_model_t2dm_covid_pheno_non_hospitalised_unvax_reduced_day_zero -
stata_cox_model_t2dm_follow_covid_pheno_hospitalised_prevax_reduced_day_zero -
stata_cox_model_t2dm_follow_main_prevax_reduced_day_zero -
stata_cox_model_t2dm_follow_covid_pheno_non_hospitalised_prevax_reduced_day_zero -
stata_cox_model_t2dm_rec_covid_pheno_hospitalised_prevax_reduced_day_zero -
stata_cox_model_t2dm_pre_rec_covid_pheno_hospitalised_prevax_reduced_day_zero -
stata_cox_model_t2dm_post_rec_covid_pheno_hospitalised_prevax_reduced_day_zero -
stata_cox_model_t2dm_rec_main_prevax_reduced_day_zero -
stata_cox_model_t2dm_pre_rec_main_prevax_reduced_day_zero -
stata_cox_model_t2dm_post_rec_main_prevax_reduced_day_zero -
stata_cox_model_t2dm_extended_follow_up_main_prevax_extended -
stata_cox_model_t2dm_extended_follow_up_covid_pheno_non_hospitalised_prevax_extended -
stata_cox_model_t2dm_extended_follow_up_covid_pheno_hospitalised_prevax_extended -
format_stata_output -
format_hazard_ratios
-
Code comparison
Compare the code used in this job request