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Job request: 13919

Organisation:
University of Bristol
Workspace:
post-covid-diabetes
ID:
kvqjhu7nw7cnftso
View repo View project.yaml

This page shows the technical details of what happened when the authorised researcher Kurt Taylor requested one or more actions to be run against real patient data within a secure environment.

By cross-referencing the list of jobs with the pipeline section below, you can infer what security level the outputs were written to.

The output security levels are:

  • highly_sensitive
    • Researchers can never directly view these outputs
    • Researchers can only request code is run against them
  • moderately_sensitive
    • Can be viewed by an approved researcher by logging into a highly secure environment
    • These are the only outputs that can be requested for public release via a controlled output review service.

Jobs

  • Action:
    stata_cox_model_t2dm_covid_pheno_non_hospitalised_vax_reduced
    Status:
    Succeeded
    Job identifier:
    u5pj3cu57b2eyu7d
  • Action:
    stata_cox_model_t2dm_follow_covid_pheno_hospitalised_prevax_reduced
    Status:
    Succeeded
    Job identifier:
    vdcbs7wuc3coagaf
  • Action:
    stata_cox_model_t2dm_follow_covid_pheno_non_hospitalised_prevax_reduced
    Status:
    Succeeded
    Job identifier:
    gezmbxfhbv55pw23
  • Action:
    Analysis_cox_t2dm_unvax
    Status:
    Failed
    Job identifier:
    ikggznbyuyihxok6
    Error:
    unmatched_patterns: No outputs found matching patterns: - output/input_t2dm_*_unvax_*_time_periods.csv
  • Action:
    Analysis_cox_t2dm_pd_no_prevax
    Status:
    Failed
    Job identifier:
    yumzsotef7gsi6uw
    Error:
    internal_error: Internal error: this usually means a platform issue rather than a problem for users to fix. The tech team are automatically notified of these errors and will be investigating.
  • Action:
    stata_cox_model_t2dm_follow_covid_pheno_non_hospitalised_prevax_day_zero_reduced
    Status:
    Succeeded
    Job identifier:
    xxlxf5bf5mmgzbuv
  • Action:
    Analysis_cox_t2dm_pd_no_unvax
    Status:
    Failed
    Job identifier:
    aij5ep2pbqud4dtk
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    stata_cox_model_t2dm_follow_covid_pheno_hospitalised_prevax_day_zero_reduced
    Status:
    Succeeded
    Job identifier:
    67qnr5qh4usjrgrn
  • Action:
    stata_cox_model_t2dm_follow_main_prevax_day_zero_reduced
    Status:
    Succeeded
    Job identifier:
    esqpldwngv5hzija
  • Action:
    Analysis_cox_t2dm_prevax
    Status:
    Failed
    Job identifier:
    2w7f3w5tzjyab3sb
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    stata_cox_model_t2dm_covid_pheno_non_hospitalised_vax_day_zero_reduced
    Status:
    Succeeded
    Job identifier:
    2qvlpd63r246irmw
  • Action:
    Analysis_cox_t2dm_obes_no_vax
    Status:
    Failed
    Job identifier:
    rdd6yksvg7xzoueu
    Error:
    unmatched_patterns: No outputs found matching patterns: - output/input_t2dm_obes_no_*_vax_*_time_periods.csv
  • Action:
    stata_cox_model_t2dm_post_rec_main_prevax_day_zero_reduced
    Status:
    Failed
    Job identifier:
    qjkzlpi4hccaaa6i
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    stata_cox_model_t2dm_post_rec_covid_pheno_hospitalised_prevax_day_zero_reduced
    Status:
    Succeeded
    Job identifier:
    q2um5gf3lj6bbw6n
  • Action:
    Analysis_cox_t2dm_pre_rec_prevax
    Status:
    Failed
    Job identifier:
    d6oqa2n4lsk4rfgg
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    stata_cox_model_t2dm_covid_pheno_hospitalised_vax_reduced
    Status:
    Succeeded
    Job identifier:
    dkvfn7fwjap5enqv
  • Action:
    stata_cox_model_t2dm_main_vax_day_zero_reduced
    Status:
    Failed
    Job identifier:
    6qyjtaydqgj5v5kb
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    stata_cox_model_t2dm_rec_covid_pheno_hospitalised_prevax_reduced
    Status:
    Failed
    Job identifier:
    3iwsw3jo6e4fyz2y
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    stata_cox_model_t2dm_post_rec_main_prevax_reduced
    Status:
    Failed
    Job identifier:
    br2cl3w7yjf6vubn
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    stata_cox_model_t2dm_rec_main_prevax_day_zero_reduced
    Status:
    Failed
    Job identifier:
    d7pngfilsx6vzvpk
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    stata_cox_model_t2dm_post_rec_covid_pheno_hospitalised_prevax_reduced
    Status:
    Failed
    Job identifier:
    q3lyhsp4txw5zx6q
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    stata_cox_model_t2dm_covid_pheno_hospitalised_vax_day_zero_reduced
    Status:
    Succeeded
    Job identifier:
    ik7sxrmk53obsudm
  • Action:
    stata_cox_model_t2dm_main_vax_reduced
    Status:
    Succeeded
    Job identifier:
    xhtoxnvohf6aknsh
  • Action:
    stata_cox_model_t2dm_extended_follow_up_covid_pheno_non_hospitalised_prevax_normal
    Status:
    Failed
    Job identifier:
    7nfo6qligyh55cfm
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    stata_cox_model_t2dm_extended_follow_up_main_prevax_reduced
    Status:
    Failed
    Job identifier:
    473pjfxzx7zhkoqc
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    stata_cox_model_t2dm_main_prevax_reduced
    Status:
    Failed
    Job identifier:
    fluneo6zdyjenedn
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    stata_cox_model_t2dm_pre_rec_covid_pheno_hospitalised_prevax_day_zero_reduced
    Status:
    Failed
    Job identifier:
    txwa3hu5nraazjwk
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    stata_cox_model_t2dm_rec_covid_pheno_hospitalised_prevax_day_zero_reduced
    Status:
    Failed
    Job identifier:
    cttlzrqubtigblxt
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    stata_cox_model_t2dm_rec_main_prevax_reduced
    Status:
    Failed
    Job identifier:
    iyk52hiyk4ai43xj
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    Analysis_cox_t2dm_obes_no_prevax
    Status:
    Failed
    Job identifier:
    lu5uihqwqgu7sw5d
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    stata_cox_model_t2dm_main_unvax_day_zero_reduced
    Status:
    Failed
    Job identifier:
    p5zijjpaodulmgv2
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    stata_cox_model_t2dm_main_unvax_reduced
    Status:
    Failed
    Job identifier:
    4pncpw4fpaa3rsjm
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    stata_cox_model_t2dm_pre_rec_covid_pheno_hospitalised_prevax_reduced
    Status:
    Failed
    Job identifier:
    nakxjf6nxzxxdxlb
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    stata_cox_model_t2dm_pre_rec_main_prevax_day_zero_reduced
    Status:
    Failed
    Job identifier:
    3hgamel5txtbwhpg
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    stata_cox_model_t2dm_pre_rec_main_prevax_reduced
    Status:
    Failed
    Job identifier:
    pkmp55ejlupcmgg6
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    stata_cox_model_t2dm_covid_pheno_hospitalised_prevax_day_zero_reduced
    Status:
    Failed
    Job identifier:
    xc2s4qtagx2hwr37
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    stata_cox_model_t2dm_main_prevax_day_zero_reduced
    Status:
    Failed
    Job identifier:
    ktf2pmm5xdqgohgl
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    stata_cox_model_t2dm_covid_pheno_hospitalised_unvax_reduced
    Status:
    Failed
    Job identifier:
    5knvoogqh6zfeyqn
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    stata_cox_model_t2dm_covid_pheno_non_hospitalised_unvax_day_zero_reduced
    Status:
    Failed
    Job identifier:
    lcty33kt3nfh7sdp
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    stata_cox_model_t2dm_extended_follow_up_covid_pheno_non_hospitalised_prevax_reduced
    Status:
    Failed
    Job identifier:
    ztubuqrovppth7yf
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    stata_cox_model_t2dm_extended_follow_up_main_prevax_normal
    Status:
    Failed
    Job identifier:
    po67geeypewlzthc
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    stata_cox_model_t2dm_covid_pheno_non_hospitalised_prevax_reduced
    Status:
    Failed
    Job identifier:
    slw36lbfdc4pqqyo
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    stata_cox_model_t2dm_follow_main_prevax_reduced
    Status:
    Failed
    Job identifier:
    lgaaej7yklafo7sk
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    stata_cox_model_t2dm_covid_pheno_hospitalised_prevax_reduced
    Status:
    Failed
    Job identifier:
    rwwaw7nvjfoppxvx
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    Analysis_cox_t2dm_extended_follow_up_prevax
    Status:
    Failed
    Job identifier:
    jq6jtmnceyjnjr46
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    Analysis_cox_t2dm_pre_rec_unvax
    Status:
    Failed
    Job identifier:
    xt67bp2aoahaaeqn
    Error:
    cancelled_by_user: Cancelled by user
  • Action:
    stata_cox_model_t2dm_covid_pheno_hospitalised_unvax_day_zero_reduced
    Status:
    Failed
    Job identifier:
    ixm2lbpaeahlkhzh
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    stata_cox_model_t2dm_covid_pheno_non_hospitalised_prevax_day_zero_reduced
    Status:
    Failed
    Job identifier:
    mmd7qjnyctuukl5u
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    stata_cox_model_t2dm_covid_pheno_non_hospitalised_unvax_reduced
    Status:
    Failed
    Job identifier:
    ghngqqkyz2zozxgk
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    stata_cox_model_t2dm_extended_follow_up_covid_pheno_hospitalised_prevax_normal
    Status:
    Failed
    Job identifier:
    ssnd2j7lqfcp7jtl
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    stata_cox_model_t2dm_extended_follow_up_covid_pheno_hospitalised_prevax_reduced
    Status:
    Failed
    Job identifier:
    3wvhecef2hph7frz
    Error:
    dependency_failed: Not starting as dependency failed

Pipeline

Show project.yaml
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Timeline

  • Created:

  • Started:

  • Finished:

  • Runtime: 13:09:59

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job request

Status
Failed
Backend
TPP
Workspace
post-covid-diabetes
Requested by
Kurt Taylor
Branch
main
Force run dependencies
No
Git commit hash
4c2d564
Requested actions
  • Analysis_cox_t2dm_prevax
  • Analysis_cox_t2dm_unvax
  • Analysis_cox_t2dm_pre_rec_prevax
  • Analysis_cox_t2dm_pre_rec_unvax
  • Analysis_cox_t2dm_pd_no_prevax
  • Analysis_cox_t2dm_pd_no_unvax
  • Analysis_cox_t2dm_obes_no_prevax
  • Analysis_cox_t2dm_obes_no_vax
  • Analysis_cox_t2dm_extended_follow_up_prevax
  • stata_cox_model_t2dm_covid_pheno_hospitalised_prevax_reduced
  • stata_cox_model_t2dm_covid_pheno_hospitalised_vax_reduced
  • stata_cox_model_t2dm_covid_pheno_hospitalised_unvax_reduced
  • stata_cox_model_t2dm_main_prevax_reduced
  • stata_cox_model_t2dm_main_vax_reduced
  • stata_cox_model_t2dm_main_unvax_reduced
  • stata_cox_model_t2dm_covid_pheno_non_hospitalised_prevax_reduced
  • stata_cox_model_t2dm_covid_pheno_non_hospitalised_vax_reduced
  • stata_cox_model_t2dm_covid_pheno_non_hospitalised_unvax_reduced
  • stata_cox_model_t2dm_follow_covid_pheno_hospitalised_prevax_reduced
  • stata_cox_model_t2dm_follow_main_prevax_reduced
  • stata_cox_model_t2dm_follow_covid_pheno_non_hospitalised_prevax_reduced
  • stata_cox_model_t2dm_rec_covid_pheno_hospitalised_prevax_reduced
  • stata_cox_model_t2dm_pre_rec_covid_pheno_hospitalised_prevax_reduced
  • stata_cox_model_t2dm_post_rec_covid_pheno_hospitalised_prevax_reduced
  • stata_cox_model_t2dm_rec_main_prevax_reduced
  • stata_cox_model_t2dm_pre_rec_main_prevax_reduced
  • stata_cox_model_t2dm_post_rec_main_prevax_reduced
  • stata_cox_model_t2dm_covid_pheno_hospitalised_prevax_day_zero_reduced
  • stata_cox_model_t2dm_covid_pheno_hospitalised_vax_day_zero_reduced
  • stata_cox_model_t2dm_covid_pheno_hospitalised_unvax_day_zero_reduced
  • stata_cox_model_t2dm_main_prevax_day_zero_reduced
  • stata_cox_model_t2dm_main_vax_day_zero_reduced
  • stata_cox_model_t2dm_main_unvax_day_zero_reduced
  • stata_cox_model_t2dm_covid_pheno_non_hospitalised_prevax_day_zero_reduced
  • stata_cox_model_t2dm_covid_pheno_non_hospitalised_vax_day_zero_reduced
  • stata_cox_model_t2dm_covid_pheno_non_hospitalised_unvax_day_zero_reduced
  • stata_cox_model_t2dm_follow_covid_pheno_hospitalised_prevax_day_zero_reduced
  • stata_cox_model_t2dm_follow_main_prevax_day_zero_reduced
  • stata_cox_model_t2dm_follow_covid_pheno_non_hospitalised_prevax_day_zero_reduced
  • stata_cox_model_t2dm_rec_covid_pheno_hospitalised_prevax_day_zero_reduced
  • stata_cox_model_t2dm_pre_rec_covid_pheno_hospitalised_prevax_day_zero_reduced
  • stata_cox_model_t2dm_post_rec_covid_pheno_hospitalised_prevax_day_zero_reduced
  • stata_cox_model_t2dm_rec_main_prevax_day_zero_reduced
  • stata_cox_model_t2dm_pre_rec_main_prevax_day_zero_reduced
  • stata_cox_model_t2dm_post_rec_main_prevax_day_zero_reduced
  • stata_cox_model_t2dm_extended_follow_up_main_prevax_normal
  • stata_cox_model_t2dm_extended_follow_up_main_prevax_reduced
  • stata_cox_model_t2dm_extended_follow_up_covid_pheno_non_hospitalised_prevax_normal
  • stata_cox_model_t2dm_extended_follow_up_covid_pheno_non_hospitalised_prevax_reduced
  • stata_cox_model_t2dm_extended_follow_up_covid_pheno_hospitalised_prevax_normal
  • stata_cox_model_t2dm_extended_follow_up_covid_pheno_hospitalised_prevax_reduced

Code comparison

Compare the code used in this job request