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Job request: 16888

Organisation:
University of Bristol
Workspace:
post-covid-gastrointestina-extf
ID:
qwj4gfxlipji7r4s

This page shows the technical details of what happened when the authorised researcher Marwa Al Arab requested one or more actions to be run against real patient data in the project, within a secure environment.

By cross-referencing the list of jobs with the pipeline section below, you can infer what security level various outputs were written to. Researchers can never directly view outputs marked as highly_sensitive ; they can only request that code runs against them. Outputs marked as moderately_sensitive can be viewed by an approved researcher by logging into a highly secure environment. Only outputs marked as moderately_sensitive can be requested for release to the public, via a controlled output review service.

Jobs

Pipeline

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Timeline

  • Created:

  • Started:

  • Finished:

  • Runtime: 106:45:04

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job information

Status
Failed
Backend
TPP
Requested by
Marwa Al Arab
Branch
main
Force run dependencies
No
Git commit hash
b566884
Requested actions
  • make_model_input-cohort_prevax-sub_covid_nonhospitalised-acute_pancreatitis
  • cox_ipw-cohort_prevax-sub_covid_nonhospitalised-acute_pancreatitis
  • make_model_input-cohort_prevax-sub_covid_nonhospitalised-appendicitis
  • cox_ipw-cohort_prevax-sub_covid_nonhospitalised-appendicitis
  • make_model_input-cohort_prevax-sub_covid_nonhospitalised-belching
  • cox_ipw-cohort_prevax-sub_covid_nonhospitalised-belching
  • make_model_input-cohort_prevax-sub_covid_nonhospitalised-bloody_stools
  • cox_ipw-cohort_prevax-sub_covid_nonhospitalised-bloody_stools
  • make_model_input-cohort_prevax-sub_covid_nonhospitalised-bowel_ischaemia
  • cox_ipw-cohort_prevax-sub_covid_nonhospitalised-bowel_ischaemia
  • make_model_input-cohort_prevax-sub_covid_nonhospitalised-diarrhoea
  • cox_ipw-cohort_prevax-sub_covid_nonhospitalised-diarrhoea
  • make_model_input-cohort_prevax-sub_covid_nonhospitalised-dyspepsia
  • cox_ipw-cohort_prevax-sub_covid_nonhospitalised-dyspepsia
  • make_model_input-cohort_prevax-sub_covid_nonhospitalised-gallstones_disease
  • cox_ipw-cohort_prevax-sub_covid_nonhospitalised-gallstones_disease
  • make_model_input-cohort_prevax-sub_covid_nonhospitalised-gastro_oesophageal_reflux_disease
  • cox_ipw-cohort_prevax-sub_covid_nonhospitalised-gastro_oesophageal_reflux_disease
  • make_model_input-cohort_prevax-sub_covid_nonhospitalised-ibs
  • cox_ipw-cohort_prevax-sub_covid_nonhospitalised-ibs
  • make_model_input-cohort_prevax-sub_covid_nonhospitalised-intestinal_obstruction
  • cox_ipw-cohort_prevax-sub_covid_nonhospitalised-intestinal_obstruction
  • make_model_input-cohort_prevax-sub_covid_nonhospitalised-lower_gi_bleeding
  • cox_ipw-cohort_prevax-sub_covid_nonhospitalised-lower_gi_bleeding
  • make_model_input-cohort_prevax-sub_covid_nonhospitalised-nausea
  • cox_ipw-cohort_prevax-sub_covid_nonhospitalised-nausea
  • make_model_input-cohort_prevax-sub_covid_nonhospitalised-nonalcoholic_steatohepatitis
  • cox_ipw-cohort_prevax-sub_covid_nonhospitalised-nonalcoholic_steatohepatitis
  • make_model_input-cohort_prevax-sub_covid_nonhospitalised-nonvariceal_gi_bleeding
  • cox_ipw-cohort_prevax-sub_covid_nonhospitalised-nonvariceal_gi_bleeding
  • make_model_input-cohort_prevax-sub_covid_nonhospitalised-peptic_ulcer
  • cox_ipw-cohort_prevax-sub_covid_nonhospitalised-peptic_ulcer
  • make_model_input-cohort_prevax-sub_covid_nonhospitalised-upper_gi_bleeding
  • cox_ipw-cohort_prevax-sub_covid_nonhospitalised-upper_gi_bleeding
  • make_model_input-cohort_prevax-sub_covid_nonhospitalised-variceal_gi_bleeding
  • cox_ipw-cohort_prevax-sub_covid_nonhospitalised-variceal_gi_bleeding
  • make_model_input-cohort_prevax-sub_covid_nonhospitalised-vomiting
  • cox_ipw-cohort_prevax-sub_covid_nonhospitalised-vomiting
  • make_model_input-cohort_unvax-sub_covid_nonhospitalised-abdominal_distension
  • cox_ipw-cohort_unvax-sub_covid_nonhospitalised-abdominal_distension
  • make_model_input-cohort_unvax-sub_covid_nonhospitalised-abdominal_paindiscomfort
  • cox_ipw-cohort_unvax-sub_covid_nonhospitalised-abdominal_paindiscomfort
  • make_model_input-cohort_unvax-sub_covid_nonhospitalised-acute_pancreatitis
  • cox_ipw-cohort_unvax-sub_covid_nonhospitalised-acute_pancreatitis
  • make_model_input-cohort_unvax-sub_covid_nonhospitalised-appendicitis
  • cox_ipw-cohort_unvax-sub_covid_nonhospitalised-appendicitis
  • make_model_input-cohort_unvax-sub_covid_nonhospitalised-belching
  • cox_ipw-cohort_unvax-sub_covid_nonhospitalised-belching
  • make_model_input-cohort_unvax-sub_covid_nonhospitalised-bloody_stools
  • cox_ipw-cohort_unvax-sub_covid_nonhospitalised-bloody_stools
  • make_model_input-cohort_unvax-sub_covid_nonhospitalised-bowel_ischaemia
  • cox_ipw-cohort_unvax-sub_covid_nonhospitalised-bowel_ischaemia
  • make_model_input-cohort_unvax-sub_covid_nonhospitalised-diarrhoea
  • cox_ipw-cohort_unvax-sub_covid_nonhospitalised-diarrhoea
  • make_model_input-cohort_unvax-sub_covid_nonhospitalised-dyspepsia
  • cox_ipw-cohort_unvax-sub_covid_nonhospitalised-dyspepsia
  • make_model_input-cohort_unvax-sub_covid_nonhospitalised-gallstones_disease
  • cox_ipw-cohort_unvax-sub_covid_nonhospitalised-gallstones_disease
  • make_model_input-cohort_unvax-sub_covid_nonhospitalised-gastro_oesophageal_reflux_disease
  • cox_ipw-cohort_unvax-sub_covid_nonhospitalised-gastro_oesophageal_reflux_disease
  • make_model_input-cohort_unvax-sub_covid_nonhospitalised-ibs
  • cox_ipw-cohort_unvax-sub_covid_nonhospitalised-ibs
  • make_model_input-cohort_unvax-sub_covid_nonhospitalised-intestinal_obstruction
  • cox_ipw-cohort_unvax-sub_covid_nonhospitalised-intestinal_obstruction
  • make_model_input-cohort_unvax-sub_covid_nonhospitalised-lower_gi_bleeding
  • cox_ipw-cohort_unvax-sub_covid_nonhospitalised-lower_gi_bleeding
  • make_model_input-cohort_unvax-sub_covid_nonhospitalised-nausea
  • cox_ipw-cohort_unvax-sub_covid_nonhospitalised-nausea
  • make_model_input-cohort_unvax-sub_covid_nonhospitalised-nonalcoholic_steatohepatitis
  • cox_ipw-cohort_unvax-sub_covid_nonhospitalised-nonalcoholic_steatohepatitis
  • make_model_input-cohort_unvax-sub_covid_nonhospitalised-nonvariceal_gi_bleeding
  • cox_ipw-cohort_unvax-sub_covid_nonhospitalised-nonvariceal_gi_bleeding
  • make_model_input-cohort_unvax-sub_covid_nonhospitalised-peptic_ulcer
  • cox_ipw-cohort_unvax-sub_covid_nonhospitalised-peptic_ulcer
  • make_model_input-cohort_unvax-sub_covid_nonhospitalised-upper_gi_bleeding
  • cox_ipw-cohort_unvax-sub_covid_nonhospitalised-upper_gi_bleeding
  • make_model_input-cohort_unvax-sub_covid_nonhospitalised-variceal_gi_bleeding
  • cox_ipw-cohort_unvax-sub_covid_nonhospitalised-variceal_gi_bleeding
  • make_model_input-cohort_unvax-sub_covid_nonhospitalised-vomiting
  • cox_ipw-cohort_unvax-sub_covid_nonhospitalised-vomiting
  • make_model_input-cohort_vax-sub_covid_nonhospitalised-abdominal_distension
  • cox_ipw-cohort_vax-sub_covid_nonhospitalised-abdominal_distension
  • make_model_input-cohort_vax-sub_covid_nonhospitalised-abdominal_paindiscomfort
  • cox_ipw-cohort_vax-sub_covid_nonhospitalised-abdominal_paindiscomfort
  • make_model_input-cohort_vax-sub_covid_nonhospitalised-acute_pancreatitis
  • cox_ipw-cohort_vax-sub_covid_nonhospitalised-acute_pancreatitis
  • make_model_input-cohort_vax-sub_covid_nonhospitalised-appendicitis
  • cox_ipw-cohort_vax-sub_covid_nonhospitalised-appendicitis
  • make_model_input-cohort_vax-sub_covid_nonhospitalised-belching
  • cox_ipw-cohort_vax-sub_covid_nonhospitalised-belching
  • make_model_input-cohort_vax-sub_covid_nonhospitalised-bloody_stools
  • cox_ipw-cohort_vax-sub_covid_nonhospitalised-bloody_stools
  • make_model_input-cohort_vax-sub_covid_nonhospitalised-bowel_ischaemia
  • cox_ipw-cohort_vax-sub_covid_nonhospitalised-bowel_ischaemia
  • make_model_input-cohort_vax-sub_covid_nonhospitalised-diarrhoea
  • cox_ipw-cohort_vax-sub_covid_nonhospitalised-diarrhoea
  • make_model_input-cohort_vax-sub_covid_nonhospitalised-dyspepsia
  • cox_ipw-cohort_vax-sub_covid_nonhospitalised-dyspepsia
  • make_model_input-cohort_vax-sub_covid_nonhospitalised-gallstones_disease
  • cox_ipw-cohort_vax-sub_covid_nonhospitalised-gallstones_disease
  • make_model_input-cohort_vax-sub_covid_nonhospitalised-gastro_oesophageal_reflux_disease
  • cox_ipw-cohort_vax-sub_covid_nonhospitalised-gastro_oesophageal_reflux_disease
  • make_model_input-cohort_vax-sub_covid_nonhospitalised-ibs
  • cox_ipw-cohort_vax-sub_covid_nonhospitalised-ibs
  • make_model_input-cohort_vax-sub_covid_nonhospitalised-intestinal_obstruction
  • cox_ipw-cohort_vax-sub_covid_nonhospitalised-intestinal_obstruction
  • make_model_input-cohort_vax-sub_covid_nonhospitalised-lower_gi_bleeding
  • cox_ipw-cohort_vax-sub_covid_nonhospitalised-lower_gi_bleeding
  • make_model_input-cohort_vax-sub_covid_nonhospitalised-nausea
  • cox_ipw-cohort_vax-sub_covid_nonhospitalised-nausea
  • make_model_input-cohort_vax-sub_covid_nonhospitalised-nonalcoholic_steatohepatitis
  • cox_ipw-cohort_vax-sub_covid_nonhospitalised-nonalcoholic_steatohepatitis
  • make_model_input-cohort_vax-sub_covid_nonhospitalised-nonvariceal_gi_bleeding
  • cox_ipw-cohort_vax-sub_covid_nonhospitalised-nonvariceal_gi_bleeding
  • make_model_input-cohort_vax-sub_covid_nonhospitalised-peptic_ulcer
  • cox_ipw-cohort_vax-sub_covid_nonhospitalised-peptic_ulcer
  • make_model_input-cohort_vax-sub_covid_nonhospitalised-upper_gi_bleeding
  • cox_ipw-cohort_vax-sub_covid_nonhospitalised-upper_gi_bleeding
  • make_model_input-cohort_vax-sub_covid_nonhospitalised-variceal_gi_bleeding
  • cox_ipw-cohort_vax-sub_covid_nonhospitalised-variceal_gi_bleeding
  • make_model_input-cohort_vax-sub_covid_nonhospitalised-vomiting
  • cox_ipw-cohort_vax-sub_covid_nonhospitalised-vomiting
  • make_model_input-cohort_prevax-sub_ethnicity_asian-diarrhoea
  • cox_ipw-cohort_prevax-sub_ethnicity_asian-diarrhoea
  • make_model_input-cohort_unvax-sub_ethnicity_asian-diarrhoea
  • cox_ipw-cohort_unvax-sub_ethnicity_asian-diarrhoea
  • make_model_input-cohort_vax-sub_ethnicity_asian-diarrhoea
  • cox_ipw-cohort_vax-sub_ethnicity_asian-diarrhoea
  • make_model_input-cohort_prevax-sub_ethnicity_black-diarrhoea
  • cox_ipw-cohort_prevax-sub_ethnicity_black-diarrhoea
  • make_model_input-cohort_unvax-sub_ethnicity_black-diarrhoea
  • cox_ipw-cohort_unvax-sub_ethnicity_black-diarrhoea
  • make_model_input-cohort_vax-sub_ethnicity_black-diarrhoea
  • cox_ipw-cohort_vax-sub_ethnicity_black-diarrhoea
  • make_model_input-cohort_prevax-sub_ethnicity_mixed-diarrhoea
  • cox_ipw-cohort_prevax-sub_ethnicity_mixed-diarrhoea
  • make_model_input-cohort_unvax-sub_ethnicity_mixed-diarrhoea
  • cox_ipw-cohort_unvax-sub_ethnicity_mixed-diarrhoea
  • make_model_input-cohort_vax-sub_ethnicity_mixed-diarrhoea
  • cox_ipw-cohort_vax-sub_ethnicity_mixed-diarrhoea
  • make_model_input-cohort_prevax-sub_ethnicity_other-diarrhoea
  • cox_ipw-cohort_prevax-sub_ethnicity_other-diarrhoea
  • make_model_input-cohort_unvax-sub_ethnicity_other-diarrhoea
  • cox_ipw-cohort_unvax-sub_ethnicity_other-diarrhoea
  • make_model_input-cohort_vax-sub_ethnicity_other-diarrhoea
  • cox_ipw-cohort_vax-sub_ethnicity_other-diarrhoea
  • make_model_input-cohort_prevax-sub_ethnicity_white-diarrhoea
  • cox_ipw-cohort_prevax-sub_ethnicity_white-diarrhoea
  • make_model_input-cohort_unvax-sub_ethnicity_white-diarrhoea
  • cox_ipw-cohort_unvax-sub_ethnicity_white-diarrhoea
  • make_model_input-cohort_vax-sub_ethnicity_white-diarrhoea
  • cox_ipw-cohort_vax-sub_ethnicity_white-diarrhoea
  • make_model_input-cohort_prevax-sub_priorhistory_false-diarrhoea-cov_bin_overall_gi_and_symptoms
  • cox_ipw-cohort_prevax-sub_priorhistory_false-diarrhoea-cov_bin_overall_gi_and_symptoms
  • make_model_input-cohort_unvax-sub_priorhistory_false-diarrhoea-cov_bin_overall_gi_and_symptoms
  • cox_ipw-cohort_unvax-sub_priorhistory_false-diarrhoea-cov_bin_overall_gi_and_symptoms
  • make_model_input-cohort_vax-sub_priorhistory_false-diarrhoea-cov_bin_overall_gi_and_symptoms
  • cox_ipw-cohort_vax-sub_priorhistory_false-diarrhoea-cov_bin_overall_gi_and_symptoms
  • make_model_input-cohort_prevax-sub_priorhistory_true-diarrhoea-cov_bin_overall_gi_and_symptoms
  • cox_ipw-cohort_prevax-sub_priorhistory_true-diarrhoea-cov_bin_overall_gi_and_symptoms
  • make_model_input-cohort_unvax-sub_priorhistory_true-diarrhoea-cov_bin_overall_gi_and_symptoms
  • cox_ipw-cohort_unvax-sub_priorhistory_true-diarrhoea-cov_bin_overall_gi_and_symptoms
  • make_model_input-cohort_vax-sub_priorhistory_true-diarrhoea-cov_bin_overall_gi_and_symptoms
  • cox_ipw-cohort_vax-sub_priorhistory_true-diarrhoea-cov_bin_overall_gi_and_symptoms
  • make_model_input-cohort_prevax-sub_prioroperations_false-diarrhoea-cov_bin_gi_operations
  • cox_ipw-cohort_prevax-sub_prioroperations_false-diarrhoea-cov_bin_gi_operations
  • make_model_input-cohort_unvax-sub_prioroperations_false-diarrhoea-cov_bin_gi_operations
  • cox_ipw-cohort_unvax-sub_prioroperations_false-diarrhoea-cov_bin_gi_operations
  • make_model_input-cohort_vax-sub_prioroperations_false-diarrhoea-cov_bin_gi_operations
  • cox_ipw-cohort_vax-sub_prioroperations_false-diarrhoea-cov_bin_gi_operations
  • make_model_input-cohort_prevax-sub_prioroperations_true-diarrhoea-cov_bin_gi_operations
  • cox_ipw-cohort_prevax-sub_prioroperations_true-diarrhoea-cov_bin_gi_operations
  • make_model_input-cohort_unvax-sub_prioroperations_true-diarrhoea-cov_bin_gi_operations
  • cox_ipw-cohort_unvax-sub_prioroperations_true-diarrhoea-cov_bin_gi_operations
  • make_model_input-cohort_vax-sub_prioroperations_true-diarrhoea-cov_bin_gi_operations
  • cox_ipw-cohort_vax-sub_prioroperations_true-diarrhoea-cov_bin_gi_operations
  • make_model_input-cohort_prevax-sub_sex_female-diarrhoea
  • cox_ipw-cohort_prevax-sub_sex_female-diarrhoea
  • make_model_input-cohort_unvax-sub_sex_female-diarrhoea
  • cox_ipw-cohort_unvax-sub_sex_female-diarrhoea
  • make_model_input-cohort_vax-sub_sex_female-diarrhoea
  • cox_ipw-cohort_vax-sub_sex_female-diarrhoea
  • make_model_input-cohort_prevax-sub_sex_male-diarrhoea
  • cox_ipw-cohort_prevax-sub_sex_male-diarrhoea
  • make_model_input-cohort_unvax-sub_sex_male-diarrhoea
  • cox_ipw-cohort_unvax-sub_sex_male-diarrhoea
  • make_model_input-cohort_vax-sub_sex_male-diarrhoea
  • cox_ipw-cohort_vax-sub_sex_male-diarrhoea

Code comparison

Compare the code used in this Job Request