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Job request: 19478

Organisation:
University of Bristol
Workspace:
post-covid-gastrointestina-extf
ID:
2fzmj35gr2ufqqn5
View repo View project.yaml

This page shows the technical details of what happened when the authorised researcher Marwa Al Arab requested one or more actions to be run against real patient data within a secure environment.

By cross-referencing the list of jobs with the pipeline section below, you can infer what security level the outputs were written to.

The output security levels are:

  • highly_sensitive
    • Researchers can never directly view these outputs
    • Researchers can only request code is run against them
  • moderately_sensitive
    • Can be viewed by an approved researcher by logging into a highly secure environment
    • These are the only outputs that can be requested for public release via a controlled output review service.

Jobs

  • Action:
    cox_ipw-cohort_prevax-sub_covid_hospitalised-gallstones_disease
    Status:
    Failed
    Job identifier:
    p5loiwfiobqqe4hl
    Error:
    unmatched_patterns: No outputs found matching patterns: - output/ready-cohort_prevax-sub_covid_hospitalised-gallstones_disease.csv
  • Action:
    cox_ipw-cohort_prevax-sub_covid_hospitalised-nonalcoholic_steatohepatitis
    Status:
    Failed
    Job identifier:
    e4ygj5dmbrolz3ng
    Error:
    unmatched_patterns: No outputs found matching patterns: - output/ready-cohort_prevax-sub_covid_hospitalised-nonalcoholic_steatohepatitis.csv
  • Action:
    cox_ipw-cohort_prevax-sub_covid_hospitalised-upper_gi_bleeding
    Status:
    Failed
    Job identifier:
    vytfmgwwxjb7gcn2
    Error:
    unmatched_patterns: No outputs found matching patterns: - output/ready-cohort_prevax-sub_covid_hospitalised-upper_gi_bleeding.csv
  • Action:
    stata_cox_model_cohort_prevax-sub_covid_hospitalised-gallstones_disease
    Status:
    Failed
    Job identifier:
    zqgxpytabva3ikdj
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    stata_cox_model_cohort_prevax-sub_covid_hospitalised-nonalcoholic_steatohepatitis
    Status:
    Failed
    Job identifier:
    l3lytzgnrcsejimy
    Error:
    dependency_failed: Not starting as dependency failed
  • Action:
    stata_cox_model_cohort_prevax-sub_covid_hospitalised-upper_gi_bleeding
    Status:
    Failed
    Job identifier:
    j2mfrv4bqziubbrl
    Error:
    dependency_failed: Not starting as dependency failed

Pipeline

Show project.yaml
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Timeline

  • Created:

  • Started:

  • Finished:

  • Runtime: 05:16:12

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job request

Status
Failed
Backend
TPP
Workspace
post-covid-gastrointestina-extf
Requested by
Marwa Al Arab
Branch
main
Force run dependencies
No
Git commit hash
a00cd6e
Requested actions
  • cox_ipw-cohort_prevax-sub_covid_hospitalised-gallstones_disease
  • cox_ipw-cohort_prevax-sub_covid_hospitalised-nonalcoholic_steatohepatitis
  • cox_ipw-cohort_prevax-sub_covid_hospitalised-upper_gi_bleeding
  • stata_cox_model_cohort_prevax-sub_covid_hospitalised-gallstones_disease
  • stata_cox_model_cohort_prevax-sub_covid_hospitalised-nonalcoholic_steatohepatitis
  • stata_cox_model_cohort_prevax-sub_covid_hospitalised-upper_gi_bleeding

Code comparison

Compare the code used in this job request