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cox_ipw-cohort_prevax-sub_priorhistory_false-dyspepsia-cov_bin_overall_gi_and_symptoms

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  • Moved to the pending or running state on the backend:

  • Finished running on the backend:

  • Time spent running on the backend: 01:40:32

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Job information

Status
Succeeded

Completed successfully

Job identifier
jbk2yuywqhliktyw
Job request
21167
Requested by
Marwa Al Arab
Branch
main
Backend
TPP
Action
cox_ipw-cohort_prevax-sub_priorhistory_false-dyspepsia-cov_bin_overall_gi_and_symptoms
Run command
r:latest analysis/cox-ipw.R --df_input=model_input-cohort_prevax-sub_priorhistory_false-dyspepsia-cov_bin_overall_gi_and_symptoms.rds --ipw=TRUE --exposure=exp_date --outcome=out_date --strata=cov_cat_region --covariate_sex=cov_cat_sex --covariate_age=cov_num_age '--covariate_other=cov_cat_ethnicity;cov_cat_deprivation;cov_cat_smoking_status;cov_bin_carehome_status;cov_num_consulation_rate;cov_bin_healthcare_worker;cov_bin_gi_operations;cov_bin_obesity;cov_bin_antidepressants_bnf;cov_bin_alcohol_above_limits;cov_bin_cholelisthiasis;cov_bin_h_pylori_infection;cov_bin_nsaid_bnf;cov_bin_aspirin_bnf;cov_bin_anticoagulants_bnf' --cox_start=index_date --cox_stop=end_date_outcome --study_start=2020-01-01 --study_stop=2021-12-14 '--cut_points=1;28;197;365;714' --controls_per_case=20 --total_event_threshold=50 --episode_event_threshold=5 --covariate_threshold=5 --age_spline=TRUE --df_output=model_output-cohort_prevax-sub_priorhistory_false-dyspepsia-cov_bin_overall_gi_and_symptoms.csv
Git commit hash
85e1b7e
Code comparison