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Job request: 20407

Organisation:
University of Bristol
Workspace:
post-covid-renal
ID:
zzvgdzag7lyxgpd6
View repo View project.yaml

This page shows the technical details of what happened when the authorised researcher Scott Walter requested one or more actions to be run against real patient data within a secure environment.

By cross-referencing the list of jobs with the pipeline section below, you can infer what security level the outputs were written to.

The output security levels are:

  • highly_sensitive
    • Researchers can never directly view these outputs
    • Researchers can only request code is run against them
  • moderately_sensitive
    • Can be viewed by an approved researcher by logging into a highly secure environment
    • These are the only outputs that can be requested for public release via a controlled output review service.

Jobs

  • Action:
    preprocess_data_prevax
    Status:
    Succeeded
    Job identifier:
    zuz2b3kq3hva2nf7
  • Action:
    preprocess_data_unvax
    Status:
    Succeeded
    Job identifier:
    jenyguxh35qh2reg
  • Action:
    preprocess_data_vax
    Status:
    Succeeded
    Job identifier:
    gvoc5t3dtvy72xap
  • Action:
    stage1_data_cleaning_prevax
    Status:
    Succeeded
    Job identifier:
    ly23pz3vjb4lz7tn
  • Action:
    stage1_data_cleaning_unvax
    Status:
    Succeeded
    Job identifier:
    l6o4g4ty52rnuimd
  • Action:
    table1_unvax
    Status:
    Failed
    Job identifier:
    z4qwhj6d3jeotv4o
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    table1_prevax
    Status:
    Failed
    Job identifier:
    aoojhkcmdclamg7v
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    count_study_def_variables
    Status:
    Succeeded
    Job identifier:
    twrap2efg3nm6xa3
  • Action:
    stage1_data_cleaning_vax
    Status:
    Succeeded
    Job identifier:
    s42jlijqaml5fp2e
  • Action:
    table1_vax
    Status:
    Failed
    Job identifier:
    iwg2wwmw4reegzli
    Error:
    nonzero_exit: Job exited with an error

Pipeline

Show project.yaml
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Timeline

  • Created:

  • Started:

  • Finished:

  • Runtime: 11:46:23

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job request

Status
Failed
Backend
TPP
Workspace
post-covid-renal
Requested by
Scott Walter
Branch
main
Force run dependencies
No
Git commit hash
b118f6d
Requested actions
  • preprocess_data_prevax
  • preprocess_data_unvax
  • preprocess_data_vax
  • count_study_def_variables
  • stage1_data_cleaning_prevax
  • stage1_data_cleaning_unvax
  • stage1_data_cleaning_vax
  • table1_prevax
  • table1_unvax
  • table1_vax

Code comparison

Compare the code used in this job request