cox_ipw-cohort_prevax-sub_covid_hospitalised-pneumonia-preexisting
Timeline
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Created by the backend:
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Moved to the pending or running state on the backend:
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Failed running on the backend:
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Time spent running on the backend: 00:10:31
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Last update by backend:
These timestamps are generated and stored using the UTC timezone on the TPP backend.
Job information
- Status
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Failed
Job exited with an error
If you have VPN access you can view the log output in Airlock, in the workspace file:
metadata/cox_ipw-cohort_prevax-sub_covid_hospitalised-pneumonia-preexisting.log
- Job identifier
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5xl6swlmnzphpgxt - Job request
- 20936
- Requested by
- Rachel Denholm
- Branch
- main
- Backend
- TPP
- Action
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cox_ipw-cohort_prevax-sub_covid_hospitalised-pneumonia-preexisting - Run command
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r:latest analysis/cox-ipw.R --df_input=model_input-cohort_prevax-sub_covid_hospitalised-pneumonia-preexisting.rds --ipw=TRUE --exposure=exp_date --outcome=out_date --strata=cov_cat_region --covariate_sex=cov_cat_sex --covariate_age=cov_num_age '--covariate_other=cov_cat_ethnicity;cov_cat_deprivation;cov_num_consultation_rate;cov_bin_healthcare_worker;cov_cat_smoking_status;cov_bin_carehome_status;cov_bin_obesity;cov_bin_history_pneumonia_snomed;cov_bin_history_asthma_snomed;cov_bin_history_pulmonary_fibrosis_snomed;cov_bin_ami;cov_bin_all_stroke;cov_bin_dementia;cov_bin_liver_disease;cov_bin_chronic_kidney_disease;cov_bin_cancer;cov_bin_hypertension;cov_bin_diabetes' --cox_start=index_date --cox_stop=end_date_outcome --study_start=2020-01-01 --study_stop=2021-12-14 '--cut_points=1;28;197;365;714' --controls_per_case=20 --total_event_threshold=50 --episode_event_threshold=5 --covariate_threshold=5 --age_spline=TRUE --df_output=model_output-cohort_prevax-sub_covid_hospitalised-pneumonia-preexisting.csv - Git commit hash
- da1fc29