Job request: 3956

View Repo View project.yaml

This page shows the technical details of what happened when authorised researcher Venexia Walker requested one or more actions to be run against real patient data in the post-covid-bristol project, within a secure environment.

By cross-referencing the indicated Requested Actions with the Pipeline section below, you can infer what security level various outputs were written to. Outputs marked as highly_sensitive can never be viewed directly by a researcher; they can only request that code runs against them. Outputs marked as moderately_sensitive can be viewed by an approved researcher by logging into a highly secure environment. Only outputs marked as moderately_sensitive can be requested for release to the public, via a controlled output review service.

Jobs

ID Status Action
veoskluthdjpopu3 succeeded generate_study_population
rgteai67wvwzfdcu succeeded covariate_check_ages_40_60_80

Pipeline

Show Hide project.yaml
version: '3.0'

expectations:
  population_size: 1000

actions:

  generate_study_population:
    run: cohortextractor:latest generate_cohort --study-definition study_definition
    outputs:
      highly_sensitive:
        cohort: output/input.csv

  covariate_check_ages_40_60_80:
    run: r:latest analysis/covariate_check.R 40_60_80
    needs: [generate_study_population]
    outputs:
      moderately_sensitive:
        covariate_check_ages: output/covariate_check_ages_40_60_80.csv

State

State is inferred from the related Jobs.

Status: Succeeded

Timings

Timings set to UTC timezone.

  • Created:
  • Started:
  • Finished:
  • Runtime: 06:25:16

Config

  • Backend:
    TPP
  • Workspace:
    nhsdtre_replication
  • Branch:
    main
  • Creator:
    venexia
  • Force run dependencies:
    True
  • Git Commit Hash:
    6a0ada5
  • Requested actions:
    • run_all