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cox_ipw-cohort_unvax-sub_covid_hospitalised-upper_gi_bleeding_throm_False_sensitivity

Timeline

  • Created by the backend:

  • Moved to the pending or running state on the backend:

  • Failed running on the backend:

  • Time spent running on the backend: 00:02:57

  • Last update by backend:

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job information

Status
Failed

Job exited with an error

You can check the log output in the outputs viewer VPN Required

Alternatively, view the file on the TPP server at: 

/d/Level4Files/workspaces/post-covid-gastrointestina-extf/metadata/cox_ipw-cohort_unvax-sub_covid_hospitalised-upper_gi_bleeding_throm_False_sensitivity.log

Job identifier
vn3wco7hus7xulwc
Job request
21730
Requested by
Marwa Al Arab
Branch
main
Backend
TPP
Action
cox_ipw-cohort_unvax-sub_covid_hospitalised-upper_gi_bleeding_throm_False_sensitivity
Run command
r:latest analysis/cox-ipw.R --df_input=model_input-cohort_unvax-sub_covid_hospitalised-upper_gi_bleeding_throm_False_sensitivity.rds --ipw=TRUE --exposure=exp_date --outcome=out_date --strata=cov_cat_region --covariate_sex=cov_cat_sex --covariate_age=cov_num_age '--covariate_other=cov_cat_ethnicity;cov_cat_deprivation;cov_cat_smoking_status;cov_bin_carehome_status;cov_num_consulation_rate;cov_bin_healthcare_worker;cov_bin_gi_operations;cov_bin_overall_gi_and_symptoms;cov_bin_obesity;cov_bin_antidepressants_bnf;cov_bin_alcohol_above_limits;cov_bin_cholelisthiasis;cov_bin_h_pylori_infection;cov_bin_nsaid_bnf;cov_bin_aspirin_bnf;cov_bin_anticoagulants_bnf' --cox_start=index_date --cox_stop=end_date_outcome --study_start=2021-06-01 --study_stop=2021-12-14 '--cut_points=1;28;197' --controls_per_case=20 --total_event_threshold=50 --episode_event_threshold=5 --covariate_threshold=5 --age_spline=TRUE --df_output=model_output-cohort_unvax-sub_covid_hospitalised-upper_gi_bleeding_throm_False_sensitivity.csv
Git commit hash
aa5c563
Code comparison
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