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Job request: 19435

Organisation:
University of Bristol
Workspace:
post-covid-mentalhealth-v2
ID:
hokrifvmtur7rrfp
View repo View project.yaml

This page shows the technical details of what happened when the authorised researcher Venexia Walker requested one or more actions to be run against real patient data within a secure environment.

By cross-referencing the list of jobs with the pipeline section below, you can infer what security level the outputs were written to.

The output security levels are:

  • highly_sensitive
    • Researchers can never directly view these outputs
    • Researchers can only request code is run against them
  • moderately_sensitive
    • Can be viewed by an approved researcher by logging into a highly secure environment
    • These are the only outputs that can be requested for public release via a controlled output review service.

Jobs

  • Action:
    preprocess_data_prevax_extf
    Status:
    Succeeded
    Job identifier:
    7qto3yigpyqann7d
  • Action:
    preprocess_data_vax
    Status:
    Succeeded
    Job identifier:
    qxoidgos3bc7642b
  • Action:
    stage1_data_cleaning_unvax_extf
    Status:
    Succeeded
    Job identifier:
    dfj5wcobu5rjv753
  • Action:
    make_model_input-cohort_unvax_extf-main-addiction
    Status:
    Succeeded
    Job identifier:
    6xwqaugrvtxumb6h
  • Action:
    make_model_input-cohort_unvax_extf-main-anxiety_general
    Status:
    Succeeded
    Job identifier:
    3l5ibesgeult47lg
  • Action:
    make_model_input-cohort_unvax_extf-main-anxiety_ptsd
    Status:
    Succeeded
    Job identifier:
    7ssa6t62543ulcdv
  • Action:
    make_model_input-cohort_unvax_extf-main-depression
    Status:
    Succeeded
    Job identifier:
    f7s2ahdzsz5fwik7
  • Action:
    make_model_input-cohort_unvax_extf-main-eating_disorders
    Status:
    Succeeded
    Job identifier:
    pb6gx6a775vlsk4e
  • Action:
    cox_ipw-cohort_unvax_extf-main-anxiety_general
    Status:
    Succeeded
    Job identifier:
    qkg3qeirdvqogoi7
  • Action:
    cox_ipw-cohort_unvax_extf-main-addiction
    Status:
    Succeeded
    Job identifier:
    4fyqa4py55djq2v4
  • Action:
    cox_ipw-cohort_unvax_extf-main-anxiety_ptsd
    Status:
    Succeeded
    Job identifier:
    fl7z62fzjrpkexmx
  • Action:
    cox_ipw-cohort_unvax_extf-main-depression
    Status:
    Succeeded
    Job identifier:
    su7do4br3npqzfww
  • Action:
    cox_ipw-cohort_unvax_extf-main-eating_disorders
    Status:
    Succeeded
    Job identifier:
    bbdnnx5ydoe54d7q
  • Action:
    make_model_input-cohort_unvax_extf-main-self_harm
    Status:
    Succeeded
    Job identifier:
    355p6i4v5hff2keb
  • Action:
    make_model_input-cohort_unvax_extf-main-serious_mental_illness
    Status:
    Succeeded
    Job identifier:
    5jcmcq54xhsh56cb
  • Action:
    make_model_input-cohort_unvax_extf-main-suicide
    Status:
    Succeeded
    Job identifier:
    flbgowh2d6cyccgt
  • Action:
    cox_ipw-cohort_unvax_extf-main-self_harm
    Status:
    Succeeded
    Job identifier:
    byw3c5ayjtvfq5qu
  • Action:
    cox_ipw-cohort_unvax_extf-main-serious_mental_illness
    Status:
    Succeeded
    Job identifier:
    ppum3akopk4k7eon
  • Action:
    cox_ipw-cohort_unvax_extf-main-suicide
    Status:
    Succeeded
    Job identifier:
    kvfkrpiig7qyelhl
  • Action:
    table1_unvax_extf
    Status:
    Succeeded
    Job identifier:
    f43jmmewdo4psw5r
  • Action:
    stage1_data_cleaning_prevax_extf
    Status:
    Succeeded
    Job identifier:
    rqwcu4juot6udfji
  • Action:
    stage1_data_cleaning_vax
    Status:
    Succeeded
    Job identifier:
    tt4xgvars5zj3ien
  • Action:
    make_model_input-cohort_prevax_extf-main-addiction
    Status:
    Succeeded
    Job identifier:
    22kfqqun67rak3ph
  • Action:
    make_model_input-cohort_prevax_extf-main-anxiety_general
    Status:
    Succeeded
    Job identifier:
    fhfikcgqpzpxisgv
  • Action:
    make_model_input-cohort_prevax_extf-main-anxiety_ptsd
    Status:
    Succeeded
    Job identifier:
    5qdrhafoyo5g3v6e
  • Action:
    cox_ipw-cohort_prevax_extf-main-anxiety_general
    Status:
    Succeeded
    Job identifier:
    by27olxjsvjwnyla
  • Action:
    make_model_input-cohort_prevax_extf-main-depression
    Status:
    Succeeded
    Job identifier:
    p5a2meujdyofw6af
  • Action:
    cox_ipw-cohort_prevax_extf-main-addiction
    Status:
    Succeeded
    Job identifier:
    xeowyflgkjyzbnbh
  • Action:
    cox_ipw-cohort_prevax_extf-main-anxiety_ptsd
    Status:
    Succeeded
    Job identifier:
    x4flmjhq4boeprz7
  • Action:
    cox_ipw-cohort_prevax_extf-main-depression
    Status:
    Succeeded
    Job identifier:
    7giog45orma3n4is
  • Action:
    make_model_input-cohort_prevax_extf-main-eating_disorders
    Status:
    Succeeded
    Job identifier:
    nw6dew7kygx5iynw
  • Action:
    make_model_input-cohort_prevax_extf-main-self_harm
    Status:
    Succeeded
    Job identifier:
    gag2dynvrmfscrlx
  • Action:
    cox_ipw-cohort_prevax_extf-main-eating_disorders
    Status:
    Succeeded
    Job identifier:
    ejgm5bdihvytgooh
  • Action:
    make_model_input-cohort_prevax_extf-main-serious_mental_illness
    Status:
    Succeeded
    Job identifier:
    2altr7pecfp46vii
  • Action:
    cox_ipw-cohort_prevax_extf-main-self_harm
    Status:
    Succeeded
    Job identifier:
    hhqyss55zva2chhp
  • Action:
    cox_ipw-cohort_prevax_extf-main-serious_mental_illness
    Status:
    Succeeded
    Job identifier:
    c6zkgs67tzob4b5t
  • Action:
    make_model_input-cohort_prevax_extf-main-suicide
    Status:
    Succeeded
    Job identifier:
    7qtjkd65fg5cyg57
  • Action:
    cox_ipw-cohort_prevax_extf-main-suicide
    Status:
    Succeeded
    Job identifier:
    zsyq4bnnlce5o44n
  • Action:
    make_model_input-cohort_vax-main-addiction
    Status:
    Succeeded
    Job identifier:
    4vmdwjzntkubi2hz
  • Action:
    cox_ipw-cohort_vax-main-addiction
    Status:
    Succeeded
    Job identifier:
    nwerapmho7wznd4z
  • Action:
    make_model_input-cohort_vax-main-anxiety_general
    Status:
    Succeeded
    Job identifier:
    ztmotzo4jbtdm2to
  • Action:
    make_model_input-cohort_vax-main-anxiety_ptsd
    Status:
    Succeeded
    Job identifier:
    3lz4nhpnc4whl4ng
  • Action:
    make_model_input-cohort_vax-main-depression
    Status:
    Succeeded
    Job identifier:
    rltu34mufh5hlxcg
  • Action:
    cox_ipw-cohort_vax-main-anxiety_general
    Status:
    Succeeded
    Job identifier:
    hfs5v6dzske5drhf
  • Action:
    cox_ipw-cohort_vax-main-anxiety_ptsd
    Status:
    Succeeded
    Job identifier:
    jsemwflqrltrnwck
  • Action:
    cox_ipw-cohort_vax-main-depression
    Status:
    Succeeded
    Job identifier:
    yicthyk5qjuy2m26
  • Action:
    make_model_input-cohort_vax-main-eating_disorders
    Status:
    Succeeded
    Job identifier:
    x5jf72dr4m2slczl
  • Action:
    cox_ipw-cohort_vax-main-eating_disorders
    Status:
    Failed
    Job identifier:
    kkdmtk3tdlmdvtmk
    Error:
    nonzero_exit: Job exited with an error
  • Action:
    make_model_input-cohort_vax-main-self_harm
    Status:
    Succeeded
    Job identifier:
    5rb7vxt7hfl35ezz
  • Action:
    make_model_input-cohort_vax-main-serious_mental_illness
    Status:
    Succeeded
    Job identifier:
    gpg4fnbgeupiuzte
  • Action:
    make_model_input-cohort_vax-main-suicide
    Status:
    Succeeded
    Job identifier:
    p7333wkxulat6enh
  • Action:
    table1_prevax_extf
    Status:
    Succeeded
    Job identifier:
    qrkajcdjpyk2zta4
  • Action:
    table1_vax
    Status:
    Succeeded
    Job identifier:
    p4dlsyllod3p73nq
  • Action:
    cox_ipw-cohort_vax-main-self_harm
    Status:
    Succeeded
    Job identifier:
    vy5qfzrl7nc22ytj
  • Action:
    cox_ipw-cohort_vax-main-serious_mental_illness
    Status:
    Succeeded
    Job identifier:
    nmcomepfecby4tdf
  • Action:
    cox_ipw-cohort_vax-main-suicide
    Status:
    Succeeded
    Job identifier:
    cvdke5vjfuwbvc3s

Pipeline

Show project.yaml
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Timeline

  • Created:

  • Started:

  • Finished:

  • Runtime: 70:26:24

These timestamps are generated and stored using the UTC timezone on the TPP backend.

Job request

Status
Failed
Backend
TPP
Workspace
post-covid-mentalhealth-v2
Requested by
Venexia Walker
Branch
main
Force run dependencies
No
Git commit hash
77f632c
Requested actions
  • preprocess_data_prevax_extf
  • preprocess_data_vax
  • stage1_data_cleaning_prevax_extf
  • stage1_data_cleaning_unvax_extf
  • stage1_data_cleaning_vax
  • table1_prevax_extf
  • table1_unvax_extf
  • table1_vax
  • make_model_input-cohort_prevax_extf-main-addiction
  • cox_ipw-cohort_prevax_extf-main-addiction
  • make_model_input-cohort_prevax_extf-main-anxiety_general
  • cox_ipw-cohort_prevax_extf-main-anxiety_general
  • make_model_input-cohort_prevax_extf-main-anxiety_ptsd
  • cox_ipw-cohort_prevax_extf-main-anxiety_ptsd
  • make_model_input-cohort_prevax_extf-main-depression
  • cox_ipw-cohort_prevax_extf-main-depression
  • make_model_input-cohort_prevax_extf-main-eating_disorders
  • cox_ipw-cohort_prevax_extf-main-eating_disorders
  • make_model_input-cohort_prevax_extf-main-self_harm
  • cox_ipw-cohort_prevax_extf-main-self_harm
  • make_model_input-cohort_prevax_extf-main-serious_mental_illness
  • cox_ipw-cohort_prevax_extf-main-serious_mental_illness
  • make_model_input-cohort_prevax_extf-main-suicide
  • cox_ipw-cohort_prevax_extf-main-suicide
  • make_model_input-cohort_unvax_extf-main-addiction
  • cox_ipw-cohort_unvax_extf-main-addiction
  • make_model_input-cohort_unvax_extf-main-anxiety_general
  • cox_ipw-cohort_unvax_extf-main-anxiety_general
  • make_model_input-cohort_unvax_extf-main-anxiety_ptsd
  • cox_ipw-cohort_unvax_extf-main-anxiety_ptsd
  • make_model_input-cohort_unvax_extf-main-depression
  • cox_ipw-cohort_unvax_extf-main-depression
  • make_model_input-cohort_unvax_extf-main-eating_disorders
  • cox_ipw-cohort_unvax_extf-main-eating_disorders
  • make_model_input-cohort_unvax_extf-main-self_harm
  • cox_ipw-cohort_unvax_extf-main-self_harm
  • make_model_input-cohort_unvax_extf-main-serious_mental_illness
  • cox_ipw-cohort_unvax_extf-main-serious_mental_illness
  • make_model_input-cohort_unvax_extf-main-suicide
  • cox_ipw-cohort_unvax_extf-main-suicide
  • make_model_input-cohort_vax-main-addiction
  • cox_ipw-cohort_vax-main-addiction
  • make_model_input-cohort_vax-main-anxiety_general
  • cox_ipw-cohort_vax-main-anxiety_general
  • make_model_input-cohort_vax-main-anxiety_ptsd
  • cox_ipw-cohort_vax-main-anxiety_ptsd
  • make_model_input-cohort_vax-main-depression
  • cox_ipw-cohort_vax-main-depression
  • make_model_input-cohort_vax-main-eating_disorders
  • cox_ipw-cohort_vax-main-eating_disorders
  • make_model_input-cohort_vax-main-self_harm
  • cox_ipw-cohort_vax-main-self_harm
  • make_model_input-cohort_vax-main-serious_mental_illness
  • cox_ipw-cohort_vax-main-serious_mental_illness
  • make_model_input-cohort_vax-main-suicide
  • cox_ipw-cohort_vax-main-suicide

Code comparison

Compare the code used in this job request